Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 AC091812.1-201ENST00000432235 1948 ntBASIC1.3□□□□□ -2.2
CHMP2BQ9UQN3 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
CHMP2BQ9UQN3 Y_RNA.194-201ENST00000363985 102 ntBASIC1.29□□□□□ -2.2
CHMP2BQ9UQN3 SNORD87-201ENST00000364849 89 ntBASIC1.29□□□□□ -2.2
CHMP2BQ9UQN3 RNU6-1240P-201ENST00000365155 104 ntBASIC1.29□□□□□ -2.2
CHMP2BQ9UQN3 RNU6-245P-201ENST00000384020 107 ntBASIC1.29□□□□□ -2.2
CHMP2BQ9UQN3 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.29□□□□□ -2.2
CHMP2BQ9UQN3 AL445305.1-201ENST00000432577 575 ntBASIC1.29□□□□□ -2.2
CHMP2BQ9UQN3 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.29□□□□□ -2.2
CHMP2BQ9UQN3 AC010095.1-201ENST00000443543 144 ntBASIC1.29□□□□□ -2.2
CHMP2BQ9UQN3 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.29□□□□□ -2.2
CHMP2BQ9UQN3 RPS27P1-201ENST00000450552 247 ntBASIC1.29□□□□□ -2.2
CHMP2BQ9UQN3 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.29□□□□□ -2.2
CHMP2BQ9UQN3 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.29□□□□□ -2.2
CHMP2BQ9UQN3 AC103851.1-201ENST00000506833 274 ntBASIC1.29□□□□□ -2.2
CHMP2BQ9UQN3 RNU6-256P-201ENST00000516747 97 ntBASIC1.29□□□□□ -2.2
CHMP2BQ9UQN3 RNU6-548P-201ENST00000517083 115 ntBASIC1.29□□□□□ -2.2
CHMP2BQ9UQN3 AC024909.2-201ENST00000553035 286 ntBASIC1.29□□□□□ -2.2
CHMP2BQ9UQN3 AL161670.1-201ENST00000554348 137 ntBASIC1.29□□□□□ -2.2
CHMP2BQ9UQN3 POLR3GP2-201ENST00000588366 668 ntBASIC1.29□□□□□ -2.2
CHMP2BQ9UQN3 AL365434.2-201ENST00000607979 234 ntBASIC1.29□□□□□ -2.2
CHMP2BQ9UQN3 MIR7843-201ENST00000622274 79 ntBASIC1.29□□□□□ -2.2
CHMP2BQ9UQN3 ZNF209P-201ENST00000593450 2304 ntBASIC1.29□□□□□ -2.2
CHMP2BQ9UQN3 SNORD115-32-201ENST00000364079 82 ntBASIC1.28□□□□□ -2.2
CHMP2BQ9UQN3 RNU4-75P-201ENST00000364621 146 ntBASIC1.28□□□□□ -2.2
CHMP2BQ9UQN3 Y_RNA.530-201ENST00000384587 101 ntBASIC1.28□□□□□ -2.2
CHMP2BQ9UQN3 RNU6-939P-201ENST00000384634 107 ntBASIC1.28□□□□□ -2.2
CHMP2BQ9UQN3 MIR517A-201ENST00000385001 87 ntBASIC1.28□□□□□ -2.2
CHMP2BQ9UQN3 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
CHMP2BQ9UQN3 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
CHMP2BQ9UQN3 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
CHMP2BQ9UQN3 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.28□□□□□ -2.2
CHMP2BQ9UQN3 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.28□□□□□ -2.2
CHMP2BQ9UQN3 ZNF885P-201ENST00000420174 1098 ntBASIC1.28□□□□□ -2.2
CHMP2BQ9UQN3 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.28□□□□□ -2.2
CHMP2BQ9UQN3 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.28□□□□□ -2.2
CHMP2BQ9UQN3 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.28□□□□□ -2.2
CHMP2BQ9UQN3 RNU7-34P-201ENST00000459394 64 ntBASIC1.28□□□□□ -2.2
CHMP2BQ9UQN3 RPL30P7-201ENST00000479312 323 ntBASIC1.28□□□□□ -2.2
CHMP2BQ9UQN3 TRBVA-201ENST00000498804 316 ntBASIC1.28□□□□□ -2.2
CHMP2BQ9UQN3 SNORA25.14-201ENST00000516481 132 ntBASIC1.28□□□□□ -2.2
CHMP2BQ9UQN3 AC024995.1-201ENST00000523014 93 ntBASIC1.28□□□□□ -2.2
CHMP2BQ9UQN3 CYP3A52P-201ENST00000563326 91 ntBASIC1.28□□□□□ -2.2
CHMP2BQ9UQN3 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.28□□□□□ -2.2
CHMP2BQ9UQN3 AL929325.1-201ENST00000603096 117 ntBASIC1.28□□□□□ -2.2
CHMP2BQ9UQN3 SNORD11B-201ENST00000607707 90 ntBASIC1.28□□□□□ -2.2
CHMP2BQ9UQN3 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.28□□□□□ -2.2
CHMP2BQ9UQN3 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
CHMP2BQ9UQN3 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.21
CHMP2BQ9UQN3 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.27□□□□□ -2.21
CHMP2BQ9UQN3 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.27□□□□□ -2.21
CHMP2BQ9UQN3 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
CHMP2BQ9UQN3 Y_RNA.135-201ENST00000363439 95 ntBASIC1.27□□□□□ -2.21
CHMP2BQ9UQN3 RNU6-1090P-201ENST00000364065 94 ntBASIC1.27□□□□□ -2.21
CHMP2BQ9UQN3 MIR513A1-201ENST00000385138 129 ntBASIC1.27□□□□□ -2.21
CHMP2BQ9UQN3 RNA5SP323-201ENST00000391094 133 ntBASIC1.27□□□□□ -2.21
CHMP2BQ9UQN3 MIR1261-201ENST00000408659 82 ntBASIC1.27□□□□□ -2.21
CHMP2BQ9UQN3 AC010154.1-201ENST00000425857 269 ntBASIC1.27□□□□□ -2.21
CHMP2BQ9UQN3 AC005002.2-201ENST00000438228 269 ntBASIC1.27□□□□□ -2.21
CHMP2BQ9UQN3 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC1.27□□□□□ -2.21
CHMP2BQ9UQN3 MTND2P22-201ENST00000444325 1033 ntBASIC1.27□□□□□ -2.21
CHMP2BQ9UQN3 RPS26P45-201ENST00000471748 340 ntBASIC1.27□□□□□ -2.21
CHMP2BQ9UQN3 RPL30P10-201ENST00000488148 337 ntBASIC1.27□□□□□ -2.21
CHMP2BQ9UQN3 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.27□□□□□ -2.21
CHMP2BQ9UQN3 SNORA31.10-201ENST00000516482 106 ntBASIC1.27□□□□□ -2.21
CHMP2BQ9UQN3 AC027288.2-201ENST00000553028 243 ntBASIC1.27□□□□□ -2.21
CHMP2BQ9UQN3 AC019193.3-201ENST00000609144 554 ntBASIC1.27□□□□□ -2.21
CHMP2BQ9UQN3 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.27□□□□□ -2.21
CHMP2BQ9UQN3 AC024614.3-201ENST00000637860 256 ntBASIC1.27□□□□□ -2.21
CHMP2BQ9UQN3 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
CHMP2BQ9UQN3 MTND4P12-201ENST00000498999 1377 ntBASIC1.26□□□□□ -2.21
CHMP2BQ9UQN3 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.26□□□□□ -2.21
CHMP2BQ9UQN3 RNU1-17P-201ENST00000363022 152 ntBASIC1.26□□□□□ -2.21
CHMP2BQ9UQN3 RNU6-457P-201ENST00000363999 107 ntBASIC1.26□□□□□ -2.21
CHMP2BQ9UQN3 Y_RNA.212-201ENST00000364177 102 ntBASIC1.26□□□□□ -2.21
CHMP2BQ9UQN3 Y_RNA.319-201ENST00000365138 92 ntBASIC1.26□□□□□ -2.21
CHMP2BQ9UQN3 Y_RNA.517-201ENST00000384551 106 ntBASIC1.26□□□□□ -2.21
CHMP2BQ9UQN3 MIR1185-2-201ENST00000408687 86 ntBASIC1.26□□□□□ -2.21
CHMP2BQ9UQN3 AC008134.1-201ENST00000420943 193 ntBASIC1.26□□□□□ -2.21
CHMP2BQ9UQN3 DLGAP5P1-201ENST00000430307 464 ntBASIC1.26□□□□□ -2.21
CHMP2BQ9UQN3 DAP3P1-201ENST00000441522 278 ntBASIC1.26□□□□□ -2.21
CHMP2BQ9UQN3 RN7SKP179-201ENST00000516126 217 ntBASIC1.26□□□□□ -2.21
CHMP2BQ9UQN3 RNU6-506P-201ENST00000516553 94 ntBASIC1.26□□□□□ -2.21
CHMP2BQ9UQN3 RNU6-314P-201ENST00000516574 104 ntBASIC1.26□□□□□ -2.21
CHMP2BQ9UQN3 RNU1-142P-201ENST00000516682 145 ntBASIC1.26□□□□□ -2.21
CHMP2BQ9UQN3 RNU6-1198P-201ENST00000516904 67 ntBASIC1.26□□□□□ -2.21
CHMP2BQ9UQN3 RNA5SP454-201ENST00000517231 127 ntBASIC1.26□□□□□ -2.21
CHMP2BQ9UQN3 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.26□□□□□ -2.21
CHMP2BQ9UQN3 AC245505.1-201ENST00000556398 224 ntBASIC1.26□□□□□ -2.21
CHMP2BQ9UQN3 AC022217.4-201ENST00000604389 163 ntBASIC1.26□□□□□ -2.21
CHMP2BQ9UQN3 AC021506.2-201ENST00000612354 169 ntBASIC1.26□□□□□ -2.21
CHMP2BQ9UQN3 AC048344.4-201ENST00000619744 527 ntBASIC1.26□□□□□ -2.21
CHMP2BQ9UQN3 AC009033.1-201ENST00000624279 431 ntBASIC1.26□□□□□ -2.21
CHMP2BQ9UQN3 RNA5SP327-201ENST00000362494 101 ntBASIC1.25□□□□□ -2.21
CHMP2BQ9UQN3 RNU6-727P-201ENST00000363592 107 ntBASIC1.25□□□□□ -2.21
CHMP2BQ9UQN3 RNU6-873P-201ENST00000363833 107 ntBASIC1.25□□□□□ -2.21
CHMP2BQ9UQN3 RNU6-1065P-201ENST00000384513 106 ntBASIC1.25□□□□□ -2.21
CHMP2BQ9UQN3 MIR153-2-201ENST00000385225 87 ntBASIC1.25□□□□□ -2.21
CHMP2BQ9UQN3 SNORA40.6-201ENST00000391153 128 ntBASIC1.25□□□□□ -2.21
CHMP2BQ9UQN3 SNX2P2-201ENST00000424553 323 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 169.2 ms