Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM35Q9UPQ4 AC010889.1-201ENST00000566193 2666 ntBASIC5.16□□□□□ -1.58
TRIM35Q9UPQ4 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM35Q9UPQ4 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.58
TRIM35Q9UPQ4 Y_RNA.545-201ENST00000384652 105 ntBASIC5.15□□□□□ -1.59
TRIM35Q9UPQ4 MIR605-201ENST00000385078 83 ntBASIC5.15□□□□□ -1.59
TRIM35Q9UPQ4 RNA5SP306-201ENST00000411087 107 ntBASIC5.15□□□□□ -1.59
TRIM35Q9UPQ4 AL513477.1-202ENST00000417061 214 ntBASIC5.15□□□□□ -1.59
TRIM35Q9UPQ4 AL606490.9-201ENST00000603331 271 ntBASIC5.15□□□□□ -1.59
TRIM35Q9UPQ4 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC5.15□□□□□ -1.59
TRIM35Q9UPQ4 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
TRIM35Q9UPQ4 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
TRIM35Q9UPQ4 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.14□□□□□ -1.59
TRIM35Q9UPQ4 AC010680.1-201ENST00000590024 3590 ntBASIC5.14□□□□□ -1.59
TRIM35Q9UPQ4 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM35Q9UPQ4 RNU1-96P-201ENST00000364163 162 ntBASIC5.14□□□□□ -1.59
TRIM35Q9UPQ4 RNU6-1189P-201ENST00000383958 107 ntBASIC5.14□□□□□ -1.59
TRIM35Q9UPQ4 Y_RNA.467-201ENST00000384297 102 ntBASIC5.14□□□□□ -1.59
TRIM35Q9UPQ4 RNU6-616P-201ENST00000384353 107 ntBASIC5.14□□□□□ -1.59
TRIM35Q9UPQ4 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
TRIM35Q9UPQ4 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC5.14□□□□□ -1.59
TRIM35Q9UPQ4 RPS29P7-201ENST00000439662 171 ntBASIC5.14□□□□□ -1.59
TRIM35Q9UPQ4 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC5.14□□□□□ -1.59
TRIM35Q9UPQ4 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC5.14□□□□□ -1.59
TRIM35Q9UPQ4 Z82217.1-201ENST00000625157 8149 ntBASIC5.13□□□□□ -1.59
TRIM35Q9UPQ4 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC5.13□□□□□ -1.59
TRIM35Q9UPQ4 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
TRIM35Q9UPQ4 RN7SKP224-201ENST00000364140 325 ntBASIC5.13□□□□□ -1.59
TRIM35Q9UPQ4 SNORD32B-201ENST00000364460 84 ntBASIC5.13□□□□□ -1.59
TRIM35Q9UPQ4 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
TRIM35Q9UPQ4 MIR93-201ENST00000385024 80 ntBASIC5.13□□□□□ -1.59
TRIM35Q9UPQ4 NDUFB4P4-201ENST00000404822 243 ntBASIC5.13□□□□□ -1.59
TRIM35Q9UPQ4 RNU6-628P-201ENST00000410675 107 ntBASIC5.13□□□□□ -1.59
TRIM35Q9UPQ4 AL441985.1-201ENST00000457727 251 ntBASIC5.13□□□□□ -1.59
TRIM35Q9UPQ4 HMGN1P7-201ENST00000491722 313 ntBASIC5.13□□□□□ -1.59
TRIM35Q9UPQ4 RPS29P21-201ENST00000496272 170 ntBASIC5.13□□□□□ -1.59
TRIM35Q9UPQ4 RNU6-1231P-201ENST00000517185 103 ntBASIC5.13□□□□□ -1.59
TRIM35Q9UPQ4 HSPE1P5-201ENST00000561489 272 ntBASIC5.13□□□□□ -1.59
TRIM35Q9UPQ4 MIR4286-201ENST00000580651 93 ntBASIC5.13□□□□□ -1.59
TRIM35Q9UPQ4 Y_RNA.773-201ENST00000607168 90 ntBASIC5.13□□□□□ -1.59
TRIM35Q9UPQ4 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
TRIM35Q9UPQ4 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
TRIM35Q9UPQ4 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM35Q9UPQ4 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM35Q9UPQ4 AC009487.4-201ENST00000624969 3585 ntBASIC5.12□□□□□ -1.59
TRIM35Q9UPQ4 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
TRIM35Q9UPQ4 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
TRIM35Q9UPQ4 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM35Q9UPQ4 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM35Q9UPQ4 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM35Q9UPQ4 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
TRIM35Q9UPQ4 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
TRIM35Q9UPQ4 Y_RNA.377-201ENST00000365644 108 ntBASIC5.12□□□□□ -1.59
TRIM35Q9UPQ4 RNU2-40P-201ENST00000410833 196 ntBASIC5.12□□□□□ -1.59
TRIM35Q9UPQ4 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.12□□□□□ -1.59
TRIM35Q9UPQ4 AC016717.1-201ENST00000448918 286 ntBASIC5.12□□□□□ -1.59
TRIM35Q9UPQ4 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC5.12□□□□□ -1.59
TRIM35Q9UPQ4 AC007656.2-201ENST00000624902 4547 ntBASIC5.12□□□□□ -1.59
TRIM35Q9UPQ4 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.12□□□□□ -1.59
TRIM35Q9UPQ4 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC5.12□□□□□ -1.59
TRIM35Q9UPQ4 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
TRIM35Q9UPQ4 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
TRIM35Q9UPQ4 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM35Q9UPQ4 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM35Q9UPQ4 RNU6-633P-201ENST00000362612 103 ntBASIC5.11□□□□□ -1.59
TRIM35Q9UPQ4 MIR1251-201ENST00000408552 70 ntBASIC5.11□□□□□ -1.59
TRIM35Q9UPQ4 RN7SKP156-201ENST00000410308 342 ntBASIC5.11□□□□□ -1.59
TRIM35Q9UPQ4 IFNWP4-201ENST00000453148 294 ntBASIC5.11□□□□□ -1.59
TRIM35Q9UPQ4 RNU7-14P-201ENST00000459331 62 ntBASIC5.11□□□□□ -1.59
TRIM35Q9UPQ4 SNORD19.2-201ENST00000516978 73 ntBASIC5.11□□□□□ -1.59
TRIM35Q9UPQ4 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC5.11□□□□□ -1.59
TRIM35Q9UPQ4 AP001005.3-201ENST00000622049 129 ntBASIC5.11□□□□□ -1.59
TRIM35Q9UPQ4 AC064859.1-201ENST00000624741 174 ntBASIC5.11□□□□□ -1.59
TRIM35Q9UPQ4 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC5.11□□□□□ -1.59
TRIM35Q9UPQ4 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM35Q9UPQ4 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM35Q9UPQ4 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM35Q9UPQ4 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM35Q9UPQ4 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM35Q9UPQ4 MIR199A2-201ENST00000385289 110 ntBASIC5.1□□□□□ -1.59
TRIM35Q9UPQ4 PPIAP15-201ENST00000479662 484 ntBASIC5.1□□□□□ -1.59
TRIM35Q9UPQ4 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC5.1□□□□□ -1.59
TRIM35Q9UPQ4 RNU6-928P-201ENST00000516876 104 ntBASIC5.1□□□□□ -1.59
TRIM35Q9UPQ4 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC5.1□□□□□ -1.59
TRIM35Q9UPQ4 AC012442.3-202ENST00000636742 206 ntBASIC5.1□□□□□ -1.59
TRIM35Q9UPQ4 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC5.09□□□□□ -1.59
TRIM35Q9UPQ4 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
TRIM35Q9UPQ4 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TRIM35Q9UPQ4 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC5.09□□□□□ -1.59
TRIM35Q9UPQ4 SNORD58A-201ENST00000383875 65 ntBASIC5.09□□□□□ -1.59
TRIM35Q9UPQ4 Y_RNA.621-201ENST00000411065 96 ntBASIC5.09□□□□□ -1.59
TRIM35Q9UPQ4 AC069285.2-201ENST00000440210 275 ntBASIC5.09□□□□□ -1.59
TRIM35Q9UPQ4 AL353813.1-201ENST00000440700 253 ntBASIC5.09□□□□□ -1.59
TRIM35Q9UPQ4 RNU6-1096P-201ENST00000517089 102 ntBASIC5.09□□□□□ -1.59
TRIM35Q9UPQ4 MIR4438-201ENST00000585271 93 ntBASIC5.09□□□□□ -1.59
TRIM35Q9UPQ4 AC087190.4-201ENST00000574616 8334 ntBASIC5.09□□□□□ -1.59
TRIM35Q9UPQ4 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
TRIM35Q9UPQ4 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
TRIM35Q9UPQ4 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TRIM35Q9UPQ4 RNU1-57P-201ENST00000384491 166 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 235.4 ms