Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 HMGB1P14-201ENST00000557424 591 ntBASIC4.17□□□□□ -1.74
COL17A1Q9UMD9 MIR3121-201ENST00000579680 77 ntBASIC4.17□□□□□ -1.74
COL17A1Q9UMD9 AL670379.3-201ENST00000605040 251 ntBASIC4.17□□□□□ -1.74
COL17A1Q9UMD9 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
COL17A1Q9UMD9 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
COL17A1Q9UMD9 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
COL17A1Q9UMD9 RNA5SP361-201ENST00000362686 118 ntBASIC4.16□□□□□ -1.74
COL17A1Q9UMD9 SNORD114-1-201ENST00000362705 72 ntBASIC4.16□□□□□ -1.74
COL17A1Q9UMD9 RNU6-428P-201ENST00000362942 107 ntBASIC4.16□□□□□ -1.74
COL17A1Q9UMD9 RNU6-640P-201ENST00000363693 105 ntBASIC4.16□□□□□ -1.74
COL17A1Q9UMD9 RNU6-843P-201ENST00000384454 104 ntBASIC4.16□□□□□ -1.74
COL17A1Q9UMD9 RNU6-1245P-201ENST00000411130 106 ntBASIC4.16□□□□□ -1.74
COL17A1Q9UMD9 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.16□□□□□ -1.74
COL17A1Q9UMD9 RN7SL499P-201ENST00000481141 276 ntBASIC4.16□□□□□ -1.74
COL17A1Q9UMD9 SNORA70.16-201ENST00000516390 95 ntBASIC4.16□□□□□ -1.74
COL17A1Q9UMD9 RNU6-567P-201ENST00000516746 107 ntBASIC4.16□□□□□ -1.74
COL17A1Q9UMD9 MIR4744-201ENST00000581563 82 ntBASIC4.16□□□□□ -1.74
COL17A1Q9UMD9 AC090132.2-201ENST00000615881 347 ntBASIC4.16□□□□□ -1.74
COL17A1Q9UMD9 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
COL17A1Q9UMD9 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC4.15□□□□□ -1.74
COL17A1Q9UMD9 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
COL17A1Q9UMD9 RNU4-80P-201ENST00000363200 141 ntBASIC4.15□□□□□ -1.75
COL17A1Q9UMD9 RNU6-527P-201ENST00000363425 104 ntBASIC4.15□□□□□ -1.75
COL17A1Q9UMD9 RNU6-961P-201ENST00000363893 105 ntBASIC4.15□□□□□ -1.75
COL17A1Q9UMD9 SNORA7.2-201ENST00000364446 145 ntBASIC4.15□□□□□ -1.75
COL17A1Q9UMD9 SNORD114-30-201ENST00000364448 72 ntBASIC4.15□□□□□ -1.75
COL17A1Q9UMD9 RNU4-9P-201ENST00000364951 139 ntBASIC4.15□□□□□ -1.75
COL17A1Q9UMD9 Y_RNA.348-201ENST00000365403 103 ntBASIC4.15□□□□□ -1.75
COL17A1Q9UMD9 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
COL17A1Q9UMD9 RNU6-381P-201ENST00000391259 108 ntBASIC4.15□□□□□ -1.75
COL17A1Q9UMD9 Y_RNA.630-201ENST00000411370 108 ntBASIC4.15□□□□□ -1.75
COL17A1Q9UMD9 SNRPEP9-201ENST00000436794 238 ntBASIC4.15□□□□□ -1.75
COL17A1Q9UMD9 AP000870.1-201ENST00000472927 406 ntBASIC4.15□□□□□ -1.75
COL17A1Q9UMD9 AC139453.3-201ENST00000493276 369 ntBASIC4.15□□□□□ -1.75
COL17A1Q9UMD9 RNU6-1073P-201ENST00000517182 106 ntBASIC4.15□□□□□ -1.75
COL17A1Q9UMD9 MIR3145-201ENST00000580727 82 ntBASIC4.15□□□□□ -1.75
COL17A1Q9UMD9 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
COL17A1Q9UMD9 AC091564.4-201ENST00000533934 2194 ntBASIC4.14□□□□□ -1.75
COL17A1Q9UMD9 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
COL17A1Q9UMD9 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.14□□□□□ -1.75
COL17A1Q9UMD9 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
COL17A1Q9UMD9 AC006461.1-201ENST00000412637 326 ntBASIC4.14□□□□□ -1.75
COL17A1Q9UMD9 RPL23AP49-201ENST00000492925 468 ntBASIC4.14□□□□□ -1.75
COL17A1Q9UMD9 RNA5SP445-201ENST00000515889 115 ntBASIC4.14□□□□□ -1.75
COL17A1Q9UMD9 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.14□□□□□ -1.75
COL17A1Q9UMD9 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.14□□□□□ -1.75
COL17A1Q9UMD9 AC068831.7-201ENST00000616954 363 ntBASIC4.14□□□□□ -1.75
COL17A1Q9UMD9 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
COL17A1Q9UMD9 AF127577.6-201ENST00000623352 2191 ntBASIC4.14□□□□□ -1.75
COL17A1Q9UMD9 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.14□□□□□ -1.75
COL17A1Q9UMD9 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
COL17A1Q9UMD9 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
COL17A1Q9UMD9 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
COL17A1Q9UMD9 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
COL17A1Q9UMD9 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
COL17A1Q9UMD9 AP006437.1-201ENST00000641440 3685 ntBASIC4.13□□□□□ -1.75
COL17A1Q9UMD9 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
COL17A1Q9UMD9 RNU6-1272P-201ENST00000362776 107 ntBASIC4.13□□□□□ -1.75
COL17A1Q9UMD9 RNU6-78P-201ENST00000362897 107 ntBASIC4.13□□□□□ -1.75
COL17A1Q9UMD9 RNU6-1164P-201ENST00000364428 107 ntBASIC4.13□□□□□ -1.75
COL17A1Q9UMD9 RNU6-915P-201ENST00000364943 103 ntBASIC4.13□□□□□ -1.75
COL17A1Q9UMD9 SNORD78.1-201ENST00000390866 65 ntBASIC4.13□□□□□ -1.75
COL17A1Q9UMD9 RPL21P66-201ENST00000426566 466 ntBASIC4.13□□□□□ -1.75
COL17A1Q9UMD9 AC125238.1-201ENST00000448842 249 ntBASIC4.13□□□□□ -1.75
COL17A1Q9UMD9 snoU13.30-201ENST00000458951 104 ntBASIC4.13□□□□□ -1.75
COL17A1Q9UMD9 snoU109.2-201ENST00000459316 135 ntBASIC4.13□□□□□ -1.75
COL17A1Q9UMD9 RPS29P27-201ENST00000463711 170 ntBASIC4.13□□□□□ -1.75
COL17A1Q9UMD9 AC096725.1-201ENST00000514266 313 ntBASIC4.13□□□□□ -1.75
COL17A1Q9UMD9 RNA5SP282-201ENST00000516355 108 ntBASIC4.13□□□□□ -1.75
COL17A1Q9UMD9 AC245166.1-201ENST00000521012 253 ntBASIC4.13□□□□□ -1.75
COL17A1Q9UMD9 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC4.13□□□□□ -1.75
COL17A1Q9UMD9 ANKRD30BP1-201ENST00000451052 2186 ntBASIC4.13□□□□□ -1.75
COL17A1Q9UMD9 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
COL17A1Q9UMD9 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
COL17A1Q9UMD9 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
COL17A1Q9UMD9 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
COL17A1Q9UMD9 AC009541.1-201ENST00000438279 2662 ntBASIC4.12□□□□□ -1.75
COL17A1Q9UMD9 Y_RNA.40-201ENST00000362645 93 ntBASIC4.12□□□□□ -1.75
COL17A1Q9UMD9 RNU6-336P-201ENST00000364891 107 ntBASIC4.12□□□□□ -1.75
COL17A1Q9UMD9 RNU6-72P-201ENST00000384285 79 ntBASIC4.12□□□□□ -1.75
COL17A1Q9UMD9 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
COL17A1Q9UMD9 EIF1AXP1-201ENST00000419267 435 ntBASIC4.12□□□□□ -1.75
COL17A1Q9UMD9 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC4.12□□□□□ -1.75
COL17A1Q9UMD9 RN7SL75P-201ENST00000461926 281 ntBASIC4.12□□□□□ -1.75
COL17A1Q9UMD9 RN7SKP282-201ENST00000516824 299 ntBASIC4.12□□□□□ -1.75
COL17A1Q9UMD9 AP004607.1-201ENST00000524456 203 ntBASIC4.12□□□□□ -1.75
COL17A1Q9UMD9 AC007336.1-201ENST00000576365 3828 ntBASIC4.12□□□□□ -1.75
COL17A1Q9UMD9 AC010928.2-201ENST00000588017 287 ntBASIC4.12□□□□□ -1.75
COL17A1Q9UMD9 AC069294.1-201ENST00000608397 350 ntBASIC4.12□□□□□ -1.75
COL17A1Q9UMD9 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC4.12□□□□□ -1.75
COL17A1Q9UMD9 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
COL17A1Q9UMD9 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
COL17A1Q9UMD9 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.11□□□□□ -1.75
COL17A1Q9UMD9 MIR548A3-201ENST00000385297 97 ntBASIC4.11□□□□□ -1.75
COL17A1Q9UMD9 MIR1287-201ENST00000408492 90 ntBASIC4.11□□□□□ -1.75
COL17A1Q9UMD9 U3.37-201ENST00000408528 213 ntBASIC4.11□□□□□ -1.75
COL17A1Q9UMD9 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC4.11□□□□□ -1.75
COL17A1Q9UMD9 AL121594.1-201ENST00000475906 575 ntBASIC4.11□□□□□ -1.75
COL17A1Q9UMD9 AL353997.5-201ENST00000618886 171 ntBASIC4.11□□□□□ -1.75
COL17A1Q9UMD9 ZNF702P-202ENST00000434269 1966 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 172.9 ms