Protein–RNA interactions for Protein: Q9UEU0

VTI1B, Vesicle transport through interaction with t-SNAREs homolog 1B, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BQ9UEU0 MIR200C-201ENST00000384980 68 ntBASIC3.38□□□□□ -1.87
VTI1BQ9UEU0 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.38□□□□□ -1.87
VTI1BQ9UEU0 HSPE1P13-201ENST00000451143 297 ntBASIC3.38□□□□□ -1.87
VTI1BQ9UEU0 RPS26P55-201ENST00000471178 356 ntBASIC3.38□□□□□ -1.87
VTI1BQ9UEU0 AC106707.2-201ENST00000484182 374 ntBASIC3.38□□□□□ -1.87
VTI1BQ9UEU0 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.38□□□□□ -1.87
VTI1BQ9UEU0 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.38□□□□□ -1.87
VTI1BQ9UEU0 AC104027.1-201ENST00000521887 300 ntBASIC3.38□□□□□ -1.87
VTI1BQ9UEU0 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
VTI1BQ9UEU0 MIR5692C2-201ENST00000577959 77 ntBASIC3.38□□□□□ -1.87
VTI1BQ9UEU0 U4atac.1-201ENST00000618345 95 ntBASIC3.38□□□□□ -1.87
VTI1BQ9UEU0 AC006435.5-201ENST00000624486 112 ntBASIC3.38□□□□□ -1.87
VTI1BQ9UEU0 AC073476.4-201ENST00000628409 72 ntBASIC3.38□□□□□ -1.87
VTI1BQ9UEU0 AC009093.8-201ENST00000641769 292 ntBASIC3.38□□□□□ -1.87
VTI1BQ9UEU0 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.38□□□□□ -1.87
VTI1BQ9UEU0 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
VTI1BQ9UEU0 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
VTI1BQ9UEU0 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC3.37□□□□□ -1.87
VTI1BQ9UEU0 SNORD9-201ENST00000362566 104 ntBASIC3.37□□□□□ -1.87
VTI1BQ9UEU0 RNU6-653P-201ENST00000363074 106 ntBASIC3.37□□□□□ -1.87
VTI1BQ9UEU0 Y_RNA.150-201ENST00000363562 102 ntBASIC3.37□□□□□ -1.87
VTI1BQ9UEU0 RNU6-47P-201ENST00000383866 107 ntBASIC3.37□□□□□ -1.87
VTI1BQ9UEU0 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.37□□□□□ -1.87
VTI1BQ9UEU0 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.37□□□□□ -1.87
VTI1BQ9UEU0 U8.19-201ENST00000459095 133 ntBASIC3.37□□□□□ -1.87
VTI1BQ9UEU0 RPS27P29-201ENST00000463110 252 ntBASIC3.37□□□□□ -1.87
VTI1BQ9UEU0 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3.37□□□□□ -1.87
VTI1BQ9UEU0 AC107393.1-201ENST00000512403 346 ntBASIC3.37□□□□□ -1.87
VTI1BQ9UEU0 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.37□□□□□ -1.87
VTI1BQ9UEU0 AC026403.1-201ENST00000518938 295 ntBASIC3.37□□□□□ -1.87
VTI1BQ9UEU0 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC3.37□□□□□ -1.87
VTI1BQ9UEU0 AC072026.1-201ENST00000605023 201 ntBASIC3.37□□□□□ -1.87
VTI1BQ9UEU0 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.37□□□□□ -1.87
VTI1BQ9UEU0 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.36□□□□□ -1.87
VTI1BQ9UEU0 MIR340-201ENST00000362125 95 ntBASIC3.36□□□□□ -1.87
VTI1BQ9UEU0 Y_RNA.180-201ENST00000363867 113 ntBASIC3.36□□□□□ -1.87
VTI1BQ9UEU0 RNU6-923P-201ENST00000364753 107 ntBASIC3.36□□□□□ -1.87
VTI1BQ9UEU0 Y_RNA.308-201ENST00000365043 101 ntBASIC3.36□□□□□ -1.87
VTI1BQ9UEU0 RNU6-1240P-201ENST00000365155 104 ntBASIC3.36□□□□□ -1.87
VTI1BQ9UEU0 SNORA40.19-201ENST00000390846 128 ntBASIC3.36□□□□□ -1.87
VTI1BQ9UEU0 CYCSP4-201ENST00000429682 331 ntBASIC3.36□□□□□ -1.87
VTI1BQ9UEU0 AC104389.3-201ENST00000445629 235 ntBASIC3.36□□□□□ -1.87
VTI1BQ9UEU0 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC3.36□□□□□ -1.87
VTI1BQ9UEU0 RNY3P16-201ENST00000516338 101 ntBASIC3.36□□□□□ -1.87
VTI1BQ9UEU0 RNU6-856P-201ENST00000516959 98 ntBASIC3.36□□□□□ -1.87
VTI1BQ9UEU0 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.36□□□□□ -1.87
VTI1BQ9UEU0 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.36□□□□□ -1.87
VTI1BQ9UEU0 AC013791.1-201ENST00000616619 62 ntBASIC3.36□□□□□ -1.87
VTI1BQ9UEU0 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
VTI1BQ9UEU0 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
VTI1BQ9UEU0 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.35□□□□□ -1.87
VTI1BQ9UEU0 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.35□□□□□ -1.87
VTI1BQ9UEU0 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.35□□□□□ -1.87
VTI1BQ9UEU0 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
VTI1BQ9UEU0 RNU6-1180P-201ENST00000364935 107 ntBASIC3.35□□□□□ -1.87
VTI1BQ9UEU0 RNU6-407P-201ENST00000365280 104 ntBASIC3.35□□□□□ -1.87
VTI1BQ9UEU0 RNU6-886P-201ENST00000384319 105 ntBASIC3.35□□□□□ -1.87
VTI1BQ9UEU0 RNU6-918P-201ENST00000391219 106 ntBASIC3.35□□□□□ -1.87
VTI1BQ9UEU0 RN7SKP27-201ENST00000410684 333 ntBASIC3.35□□□□□ -1.87
VTI1BQ9UEU0 SRIP3-201ENST00000413200 219 ntBASIC3.35□□□□□ -1.87
VTI1BQ9UEU0 AL353705.1-201ENST00000433468 480 ntBASIC3.35□□□□□ -1.87
VTI1BQ9UEU0 SNORA4.4-201ENST00000515921 135 ntBASIC3.35□□□□□ -1.87
VTI1BQ9UEU0 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.35□□□□□ -1.87
VTI1BQ9UEU0 MIR7851-201ENST00000610611 160 ntBASIC3.35□□□□□ -1.87
VTI1BQ9UEU0 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.34□□□□□ -1.87
VTI1BQ9UEU0 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
VTI1BQ9UEU0 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
VTI1BQ9UEU0 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
VTI1BQ9UEU0 SNORD56.3-201ENST00000363507 71 ntBASIC3.34□□□□□ -1.87
VTI1BQ9UEU0 RNU6-899P-201ENST00000363947 107 ntBASIC3.34□□□□□ -1.87
VTI1BQ9UEU0 RNU6-1048P-201ENST00000364054 107 ntBASIC3.34□□□□□ -1.87
VTI1BQ9UEU0 Y_RNA.435-201ENST00000384095 112 ntBASIC3.34□□□□□ -1.87
VTI1BQ9UEU0 RNU6-493P-201ENST00000391321 108 ntBASIC3.34□□□□□ -1.87
VTI1BQ9UEU0 AL355497.1-201ENST00000406262 551 ntBASIC3.34□□□□□ -1.87
VTI1BQ9UEU0 COX6CP10-201ENST00000416832 224 ntBASIC3.34□□□□□ -1.87
VTI1BQ9UEU0 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.34□□□□□ -1.87
VTI1BQ9UEU0 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
VTI1BQ9UEU0 CR769767.1-201ENST00000436337 346 ntBASIC3.34□□□□□ -1.87
VTI1BQ9UEU0 AC009238.1-201ENST00000442165 424 ntBASIC3.34□□□□□ -1.87
VTI1BQ9UEU0 AC025750.2-201ENST00000442609 450 ntBASIC3.34□□□□□ -1.87
VTI1BQ9UEU0 AC009237.6-201ENST00000446969 424 ntBASIC3.34□□□□□ -1.87
VTI1BQ9UEU0 RPS20P10-201ENST00000451209 253 ntBASIC3.34□□□□□ -1.87
VTI1BQ9UEU0 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.34□□□□□ -1.87
VTI1BQ9UEU0 RPL21P129-201ENST00000491732 478 ntBASIC3.34□□□□□ -1.87
VTI1BQ9UEU0 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.34□□□□□ -1.87
VTI1BQ9UEU0 RNA5SP20-201ENST00000515976 84 ntBASIC3.34□□□□□ -1.87
VTI1BQ9UEU0 RNU6-1337P-201ENST00000516525 95 ntBASIC3.34□□□□□ -1.87
VTI1BQ9UEU0 AC068657.1-201ENST00000520807 306 ntBASIC3.34□□□□□ -1.87
VTI1BQ9UEU0 AC027419.1-201ENST00000522976 328 ntBASIC3.34□□□□□ -1.87
VTI1BQ9UEU0 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.34□□□□□ -1.87
VTI1BQ9UEU0 MIR4308-201ENST00000580634 81 ntBASIC3.34□□□□□ -1.87
VTI1BQ9UEU0 AC004832.5-201ENST00000608677 401 ntBASIC3.34□□□□□ -1.87
VTI1BQ9UEU0 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
VTI1BQ9UEU0 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.34□□□□□ -1.88
VTI1BQ9UEU0 AC134026.1-201ENST00000623249 2239 ntBASIC3.34□□□□□ -1.88
VTI1BQ9UEU0 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
VTI1BQ9UEU0 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
VTI1BQ9UEU0 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
VTI1BQ9UEU0 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.33□□□□□ -1.88
VTI1BQ9UEU0 RNU6-682P-201ENST00000363843 106 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 408.2 ms