Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 AC022493.2-201ENST00000506122 481 ntBASIC0.16□□□□□ -2.38
PHRF1Q9P1Y6 RNU7-99P-201ENST00000516271 62 ntBASIC0.16□□□□□ -2.38
PHRF1Q9P1Y6 RNU6-1110P-201ENST00000516462 101 ntBASIC0.16□□□□□ -2.38
PHRF1Q9P1Y6 RNU6-922P-201ENST00000516753 99 ntBASIC0.16□□□□□ -2.38
PHRF1Q9P1Y6 AP003181.2-201ENST00000528941 181 ntBASIC0.16□□□□□ -2.38
PHRF1Q9P1Y6 AP003168.1-201ENST00000530091 307 ntBASIC0.16□□□□□ -2.38
PHRF1Q9P1Y6 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.16□□□□□ -2.38
PHRF1Q9P1Y6 EIF1P4-201ENST00000572664 335 ntBASIC0.16□□□□□ -2.38
PHRF1Q9P1Y6 MTND3P19-201ENST00000603825 345 ntBASIC0.16□□□□□ -2.38
PHRF1Q9P1Y6 AP001836.1-201ENST00000604675 523 ntBASIC0.16□□□□□ -2.38
PHRF1Q9P1Y6 AL603839.4-201ENST00000624658 1005 ntBASIC0.16□□□□□ -2.38
PHRF1Q9P1Y6 U6.114-201ENST00000636407 96 ntBASIC0.16□□□□□ -2.38
PHRF1Q9P1Y6 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.15□□□□□ -2.39
PHRF1Q9P1Y6 SNORD115-7-201ENST00000365306 82 ntBASIC0.15□□□□□ -2.39
PHRF1Q9P1Y6 MIR208B-201ENST00000401172 77 ntBASIC0.15□□□□□ -2.39
PHRF1Q9P1Y6 SNORD111-201ENST00000408139 94 ntBASIC0.15□□□□□ -2.39
PHRF1Q9P1Y6 Y_RNA.608-201ENST00000410647 95 ntBASIC0.15□□□□□ -2.39
PHRF1Q9P1Y6 AC244098.3-201ENST00000424803 96 ntBASIC0.15□□□□□ -2.39
PHRF1Q9P1Y6 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC0.15□□□□□ -2.39
PHRF1Q9P1Y6 MTCO1P19-201ENST00000443487 500 ntBASIC0.15□□□□□ -2.39
PHRF1Q9P1Y6 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.15□□□□□ -2.39
PHRF1Q9P1Y6 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC0.15□□□□□ -2.39
PHRF1Q9P1Y6 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.15□□□□□ -2.39
PHRF1Q9P1Y6 AC025465.4-201ENST00000513422 638 ntBASIC0.15□□□□□ -2.39
PHRF1Q9P1Y6 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC0.15□□□□□ -2.39
PHRF1Q9P1Y6 RNU6-1178P-201ENST00000516674 107 ntBASIC0.15□□□□□ -2.39
PHRF1Q9P1Y6 RSL24D1P11-201ENST00000591045 491 ntBASIC0.15□□□□□ -2.39
PHRF1Q9P1Y6 SNORA28-201ENST00000606769 126 ntBASIC0.15□□□□□ -2.39
PHRF1Q9P1Y6 AL357075.2-201ENST00000614906 189 ntBASIC0.15□□□□□ -2.39
PHRF1Q9P1Y6 Pinc.1-201ENST00000616452 154 ntBASIC0.15□□□□□ -2.39
PHRF1Q9P1Y6 SEPT14P17-201ENST00000617978 177 ntBASIC0.15□□□□□ -2.39
PHRF1Q9P1Y6 RNU6-393P-201ENST00000384475 107 ntBASIC0.14□□□□□ -2.39
PHRF1Q9P1Y6 AC106883.1-201ENST00000418805 562 ntBASIC0.14□□□□□ -2.39
PHRF1Q9P1Y6 MTATP6P16-201ENST00000434543 526 ntBASIC0.14□□□□□ -2.39
PHRF1Q9P1Y6 HMGN2P34-201ENST00000437647 269 ntBASIC0.14□□□□□ -2.39
PHRF1Q9P1Y6 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC0.14□□□□□ -2.39
PHRF1Q9P1Y6 AC090572.1-201ENST00000519251 160 ntBASIC0.14□□□□□ -2.39
PHRF1Q9P1Y6 AC103996.1-201ENST00000555468 102 ntBASIC0.14□□□□□ -2.39
PHRF1Q9P1Y6 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC0.14□□□□□ -2.39
PHRF1Q9P1Y6 MIR4768-201ENST00000585270 74 ntBASIC0.14□□□□□ -2.39
PHRF1Q9P1Y6 Z99497.2-201ENST00000603634 310 ntBASIC0.14□□□□□ -2.39
PHRF1Q9P1Y6 AC068792.1-201ENST00000621354 417 ntBASIC0.14□□□□□ -2.39
PHRF1Q9P1Y6 RNU6-931P-201ENST00000363850 107 ntBASIC0.13□□□□□ -2.39
PHRF1Q9P1Y6 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.13□□□□□ -2.39
PHRF1Q9P1Y6 SNORA67.2-201ENST00000384300 149 ntBASIC0.13□□□□□ -2.39
PHRF1Q9P1Y6 MRPL42P3-201ENST00000401492 326 ntBASIC0.13□□□□□ -2.39
PHRF1Q9P1Y6 MIR320B2-201ENST00000408479 138 ntBASIC0.13□□□□□ -2.39
PHRF1Q9P1Y6 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.13□□□□□ -2.39
PHRF1Q9P1Y6 AC245047.3-201ENST00000429428 127 ntBASIC0.13□□□□□ -2.39
PHRF1Q9P1Y6 AL035398.1-201ENST00000430869 322 ntBASIC0.13□□□□□ -2.39
PHRF1Q9P1Y6 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.13□□□□□ -2.39
PHRF1Q9P1Y6 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC0.13□□□□□ -2.39
PHRF1Q9P1Y6 RNA5SP54-201ENST00000516951 92 ntBASIC0.13□□□□□ -2.39
PHRF1Q9P1Y6 SNORA25.17-201ENST00000517184 124 ntBASIC0.13□□□□□ -2.39
PHRF1Q9P1Y6 AC025647.1-201ENST00000517879 253 ntBASIC0.13□□□□□ -2.39
PHRF1Q9P1Y6 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.13□□□□□ -2.39
PHRF1Q9P1Y6 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC0.13□□□□□ -2.39
PHRF1Q9P1Y6 AP000907.4-201ENST00000604143 237 ntBASIC0.13□□□□□ -2.39
PHRF1Q9P1Y6 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.13□□□□□ -2.39
PHRF1Q9P1Y6 U6.73-201ENST00000619194 103 ntBASIC0.13□□□□□ -2.39
PHRF1Q9P1Y6 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.13□□□□□ -2.39
PHRF1Q9P1Y6 Y_RNA.18-201ENST00000362461 102 ntBASIC0.13□□□□□ -2.39
PHRF1Q9P1Y6 RNU4-68P-201ENST00000364314 141 ntBASIC0.13□□□□□ -2.39
PHRF1Q9P1Y6 MIR549A-201ENST00000385268 96 ntBASIC0.13□□□□□ -2.39
PHRF1Q9P1Y6 RNU6-1186P-201ENST00000410429 97 ntBASIC0.13□□□□□ -2.39
PHRF1Q9P1Y6 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.13□□□□□ -2.39
PHRF1Q9P1Y6 RPL23AP50-201ENST00000434149 455 ntBASIC0.13□□□□□ -2.39
PHRF1Q9P1Y6 AL162725.1-201ENST00000435405 301 ntBASIC0.13□□□□□ -2.39
PHRF1Q9P1Y6 AC104332.1-201ENST00000440471 797 ntBASIC0.13□□□□□ -2.39
PHRF1Q9P1Y6 AL133217.1-201ENST00000450980 425 ntBASIC0.13□□□□□ -2.39
PHRF1Q9P1Y6 RNU6-1037P-201ENST00000459571 107 ntBASIC0.13□□□□□ -2.39
PHRF1Q9P1Y6 RNU7-12P-201ENST00000516030 62 ntBASIC0.13□□□□□ -2.39
PHRF1Q9P1Y6 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC0.13□□□□□ -2.39
PHRF1Q9P1Y6 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.13□□□□□ -2.39
PHRF1Q9P1Y6 FGF7P1-201ENST00000582820 288 ntBASIC0.13□□□□□ -2.39
PHRF1Q9P1Y6 AC137590.2-201ENST00000619709 240 ntBASIC0.13□□□□□ -2.39
PHRF1Q9P1Y6 snoZ196.1-201ENST00000625269 89 ntBASIC0.13□□□□□ -2.39
PHRF1Q9P1Y6 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.13□□□□□ -2.39
PHRF1Q9P1Y6 MIR411-201ENST00000362239 96 ntBASIC0.12□□□□□ -2.39
PHRF1Q9P1Y6 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.12□□□□□ -2.39
PHRF1Q9P1Y6 RNU6-157P-201ENST00000383957 107 ntBASIC0.12□□□□□ -2.39
PHRF1Q9P1Y6 Y_RNA.598-201ENST00000410480 95 ntBASIC0.12□□□□□ -2.39
PHRF1Q9P1Y6 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC0.12□□□□□ -2.39
PHRF1Q9P1Y6 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC0.12□□□□□ -2.39
PHRF1Q9P1Y6 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC0.12□□□□□ -2.39
PHRF1Q9P1Y6 AC009237.7-201ENST00000447357 229 ntBASIC0.12□□□□□ -2.39
PHRF1Q9P1Y6 RNU7-182P-201ENST00000459009 62 ntBASIC0.12□□□□□ -2.39
PHRF1Q9P1Y6 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.12□□□□□ -2.39
PHRF1Q9P1Y6 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.12□□□□□ -2.39
PHRF1Q9P1Y6 RNU7-28P-201ENST00000516759 62 ntBASIC0.12□□□□□ -2.39
PHRF1Q9P1Y6 RNU6-1198P-201ENST00000516904 67 ntBASIC0.12□□□□□ -2.39
PHRF1Q9P1Y6 SUB1P2-201ENST00000556401 297 ntBASIC0.12□□□□□ -2.39
PHRF1Q9P1Y6 ZNF519P3-201ENST00000557158 1032 ntBASIC0.12□□□□□ -2.39
PHRF1Q9P1Y6 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC0.12□□□□□ -2.39
PHRF1Q9P1Y6 AC004223.2-201ENST00000590309 544 ntBASIC0.12□□□□□ -2.39
PHRF1Q9P1Y6 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.12□□□□□ -2.39
PHRF1Q9P1Y6 AC080078.2-201ENST00000603766 501 ntBASIC0.12□□□□□ -2.39
PHRF1Q9P1Y6 AC104695.3-201ENST00000604052 296 ntBASIC0.12□□□□□ -2.39
PHRF1Q9P1Y6 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC0.12□□□□□ -2.39
PHRF1Q9P1Y6 AC004832.4-201ENST00000608952 331 ntBASIC0.12□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 154.1 ms