Protein–RNA interactions for Protein: Q9NY93

DDX56, Probable ATP-dependent RNA helicase DDX56, humanhuman

Known RBP Predictions only

Length 547 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56Q9NY93 RNU6-639P-201ENST00000384074 107 ntBASIC2.72□□□□□ -1.97
DDX56Q9NY93 SNORA9-201ENST00000384215 133 ntBASIC2.72□□□□□ -1.97
DDX56Q9NY93 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
DDX56Q9NY93 MIR1185-2-201ENST00000408687 86 ntBASIC2.72□□□□□ -1.97
DDX56Q9NY93 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.72□□□□□ -1.97
DDX56Q9NY93 FCF1P4-201ENST00000448326 183 ntBASIC2.72□□□□□ -1.97
DDX56Q9NY93 RNU6-221P-201ENST00000459541 99 ntBASIC2.72□□□□□ -1.97
DDX56Q9NY93 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.72□□□□□ -1.97
DDX56Q9NY93 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.72□□□□□ -1.97
DDX56Q9NY93 SNORA40.9-201ENST00000515895 93 ntBASIC2.72□□□□□ -1.97
DDX56Q9NY93 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.72□□□□□ -1.97
DDX56Q9NY93 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.72□□□□□ -1.97
DDX56Q9NY93 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
DDX56Q9NY93 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
DDX56Q9NY93 SNORD14.1-201ENST00000365609 90 ntBASIC2.71□□□□□ -1.98
DDX56Q9NY93 Y_RNA.424-201ENST00000384063 103 ntBASIC2.71□□□□□ -1.98
DDX56Q9NY93 RNU6-1310P-201ENST00000384153 107 ntBASIC2.71□□□□□ -1.98
DDX56Q9NY93 SNORA11.4-201ENST00000408823 129 ntBASIC2.71□□□□□ -1.98
DDX56Q9NY93 RNA5SP450-201ENST00000411206 102 ntBASIC2.71□□□□□ -1.98
DDX56Q9NY93 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.71□□□□□ -1.98
DDX56Q9NY93 ATP5J2P3-201ENST00000451550 258 ntBASIC2.71□□□□□ -1.98
DDX56Q9NY93 RNA5SP282-201ENST00000516355 108 ntBASIC2.71□□□□□ -1.98
DDX56Q9NY93 AC018448.1-201ENST00000552843 316 ntBASIC2.71□□□□□ -1.98
DDX56Q9NY93 MIR3684-201ENST00000579779 74 ntBASIC2.71□□□□□ -1.98
DDX56Q9NY93 MIR4680-201ENST00000580906 66 ntBASIC2.71□□□□□ -1.98
DDX56Q9NY93 MIR3670-2-201ENST00000582974 65 ntBASIC2.71□□□□□ -1.98
DDX56Q9NY93 MIR3670-1-201ENST00000584160 65 ntBASIC2.71□□□□□ -1.98
DDX56Q9NY93 MIR3670-3-201ENST00000584855 65 ntBASIC2.71□□□□□ -1.98
DDX56Q9NY93 MIR3670-4-201ENST00000612260 65 ntBASIC2.71□□□□□ -1.98
DDX56Q9NY93 AL162373.1-201ENST00000620433 407 ntBASIC2.71□□□□□ -1.98
DDX56Q9NY93 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.71□□□□□ -1.98
DDX56Q9NY93 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
DDX56Q9NY93 RNU6-450P-201ENST00000364654 107 ntBASIC2.7□□□□□ -1.98
DDX56Q9NY93 AC117470.1-201ENST00000381974 330 ntBASIC2.7□□□□□ -1.98
DDX56Q9NY93 Y_RNA.389-201ENST00000383924 113 ntBASIC2.7□□□□□ -1.98
DDX56Q9NY93 Y_RNA.422-201ENST00000384054 114 ntBASIC2.7□□□□□ -1.98
DDX56Q9NY93 Y_RNA.527-201ENST00000384573 102 ntBASIC2.7□□□□□ -1.98
DDX56Q9NY93 MIR1253-201ENST00000408273 105 ntBASIC2.7□□□□□ -1.98
DDX56Q9NY93 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.7□□□□□ -1.98
DDX56Q9NY93 AC105272.1-201ENST00000438604 198 ntBASIC2.7□□□□□ -1.98
DDX56Q9NY93 RNU6-625P-201ENST00000459412 107 ntBASIC2.7□□□□□ -1.98
DDX56Q9NY93 AL049873.1-201ENST00000480540 376 ntBASIC2.7□□□□□ -1.98
DDX56Q9NY93 AC040926.1-201ENST00000530195 238 ntBASIC2.7□□□□□ -1.98
DDX56Q9NY93 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.7□□□□□ -1.98
DDX56Q9NY93 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.7□□□□□ -1.98
DDX56Q9NY93 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
DDX56Q9NY93 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.69□□□□□ -1.98
DDX56Q9NY93 RNU6-926P-201ENST00000384075 107 ntBASIC2.69□□□□□ -1.98
DDX56Q9NY93 SNORA51.11-201ENST00000384442 131 ntBASIC2.69□□□□□ -1.98
DDX56Q9NY93 MIR606-201ENST00000384851 96 ntBASIC2.69□□□□□ -1.98
DDX56Q9NY93 MIR597-201ENST00000384968 97 ntBASIC2.69□□□□□ -1.98
DDX56Q9NY93 MIR483-201ENST00000385070 76 ntBASIC2.69□□□□□ -1.98
DDX56Q9NY93 RNA5SP475-201ENST00000410568 110 ntBASIC2.69□□□□□ -1.98
DDX56Q9NY93 AC010469.2-201ENST00000496412 480 ntBASIC2.69□□□□□ -1.98
DDX56Q9NY93 AC096725.1-201ENST00000514266 313 ntBASIC2.69□□□□□ -1.98
DDX56Q9NY93 ELOCP29-201ENST00000588193 334 ntBASIC2.69□□□□□ -1.98
DDX56Q9NY93 AC006504.6-201ENST00000590142 199 ntBASIC2.69□□□□□ -1.98
DDX56Q9NY93 AC124312.5-201ENST00000604451 268 ntBASIC2.69□□□□□ -1.98
DDX56Q9NY93 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.69□□□□□ -1.98
DDX56Q9NY93 AL137790.1-201ENST00000634283 177 ntBASIC2.69□□□□□ -1.98
DDX56Q9NY93 RNU6-1240P-201ENST00000365155 104 ntBASIC2.68□□□□□ -1.98
DDX56Q9NY93 RNU6-823P-201ENST00000391042 103 ntBASIC2.68□□□□□ -1.98
DDX56Q9NY93 AL355497.1-201ENST00000406262 551 ntBASIC2.68□□□□□ -1.98
DDX56Q9NY93 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.68□□□□□ -1.98
DDX56Q9NY93 AC113618.1-201ENST00000416747 285 ntBASIC2.68□□□□□ -1.98
DDX56Q9NY93 AC107083.1-201ENST00000439643 279 ntBASIC2.68□□□□□ -1.98
DDX56Q9NY93 RPS12P2-201ENST00000439728 269 ntBASIC2.68□□□□□ -1.98
DDX56Q9NY93 IPO7P1-201ENST00000442031 636 ntBASIC2.68□□□□□ -1.98
DDX56Q9NY93 AC025750.2-201ENST00000442609 450 ntBASIC2.68□□□□□ -1.98
DDX56Q9NY93 AL118496.2-201ENST00000448300 230 ntBASIC2.68□□□□□ -1.98
DDX56Q9NY93 AC093852.1-201ENST00000503587 266 ntBASIC2.68□□□□□ -1.98
DDX56Q9NY93 AC011406.1-201ENST00000512440 370 ntBASIC2.68□□□□□ -1.98
DDX56Q9NY93 RNA5SP82-201ENST00000516707 92 ntBASIC2.68□□□□□ -1.98
DDX56Q9NY93 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.68□□□□□ -1.98
DDX56Q9NY93 AL357075.2-201ENST00000614906 189 ntBASIC2.68□□□□□ -1.98
DDX56Q9NY93 AC006001.4-201ENST00000622243 395 ntBASIC2.68□□□□□ -1.98
DDX56Q9NY93 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
DDX56Q9NY93 AC007336.1-201ENST00000576365 3828 ntBASIC2.68□□□□□ -1.98
DDX56Q9NY93 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
DDX56Q9NY93 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
DDX56Q9NY93 DEFA7P-201ENST00000382676 285 ntBASIC2.67□□□□□ -1.98
DDX56Q9NY93 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
DDX56Q9NY93 RNU6-101P-201ENST00000410323 104 ntBASIC2.67□□□□□ -1.98
DDX56Q9NY93 ELOCP21-201ENST00000412558 336 ntBASIC2.67□□□□□ -1.98
DDX56Q9NY93 SDAD1P3-201ENST00000427380 333 ntBASIC2.67□□□□□ -1.98
DDX56Q9NY93 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.67□□□□□ -1.98
DDX56Q9NY93 AC025647.1-201ENST00000517879 253 ntBASIC2.67□□□□□ -1.98
DDX56Q9NY93 AK6P2-201ENST00000549020 471 ntBASIC2.67□□□□□ -1.98
DDX56Q9NY93 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.67□□□□□ -1.98
DDX56Q9NY93 U6.92-201ENST00000636464 89 ntBASIC2.67□□□□□ -1.98
DDX56Q9NY93 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.67□□□□□ -1.98
DDX56Q9NY93 AC080100.1-201ENST00000624239 5356 ntBASIC2.66□□□□□ -1.98
DDX56Q9NY93 MIR410-201ENST00000362222 80 ntBASIC2.66□□□□□ -1.98
DDX56Q9NY93 RNU6-859P-201ENST00000362728 107 ntBASIC2.66□□□□□ -1.98
DDX56Q9NY93 SNORA63C-201ENST00000364578 129 ntBASIC2.66□□□□□ -1.98
DDX56Q9NY93 RNU6-1160P-201ENST00000384546 104 ntBASIC2.66□□□□□ -1.98
DDX56Q9NY93 MRPL35P1-201ENST00000404272 572 ntBASIC2.66□□□□□ -1.98
DDX56Q9NY93 AL512604.1-201ENST00000404812 257 ntBASIC2.66□□□□□ -1.98
DDX56Q9NY93 RNU6-985P-201ENST00000410182 104 ntBASIC2.66□□□□□ -1.98
DDX56Q9NY93 AC060773.1-201ENST00000421698 310 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 1200.5 ms