Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 HSBP1P1-201ENST00000555205 166 ntBASIC1.97□□□□□ -2.09
BLOC1S4Q9NUP1 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.97□□□□□ -2.09
BLOC1S4Q9NUP1 AC011494.1-201ENST00000596454 237 ntBASIC1.97□□□□□ -2.09
BLOC1S4Q9NUP1 AC098657.3-201ENST00000620434 263 ntBASIC1.97□□□□□ -2.09
BLOC1S4Q9NUP1 MTND4P12-201ENST00000498999 1377 ntBASIC1.97□□□□□ -2.09
BLOC1S4Q9NUP1 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.96□□□□□ -2.1
BLOC1S4Q9NUP1 Y_RNA.179-201ENST00000363844 90 ntBASIC1.96□□□□□ -2.1
BLOC1S4Q9NUP1 RNU6-842P-201ENST00000384269 107 ntBASIC1.96□□□□□ -2.1
BLOC1S4Q9NUP1 Y_RNA.482-201ENST00000384377 111 ntBASIC1.96□□□□□ -2.1
BLOC1S4Q9NUP1 MIR583-201ENST00000384846 75 ntBASIC1.96□□□□□ -2.1
BLOC1S4Q9NUP1 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
BLOC1S4Q9NUP1 RNU6-700P-201ENST00000391043 107 ntBASIC1.96□□□□□ -2.1
BLOC1S4Q9NUP1 MIR1289-2-201ENST00000408360 111 ntBASIC1.96□□□□□ -2.1
BLOC1S4Q9NUP1 MIR548F5-201ENST00000408421 86 ntBASIC1.96□□□□□ -2.1
BLOC1S4Q9NUP1 RPL37P10-201ENST00000412884 288 ntBASIC1.96□□□□□ -2.1
BLOC1S4Q9NUP1 RPS3AP52-201ENST00000435639 297 ntBASIC1.96□□□□□ -2.1
BLOC1S4Q9NUP1 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.96□□□□□ -2.1
BLOC1S4Q9NUP1 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.96□□□□□ -2.1
BLOC1S4Q9NUP1 AC093303.1-201ENST00000514549 295 ntBASIC1.96□□□□□ -2.1
BLOC1S4Q9NUP1 RNU6-1114P-201ENST00000516022 107 ntBASIC1.96□□□□□ -2.1
BLOC1S4Q9NUP1 Y_RNA.708-201ENST00000516950 96 ntBASIC1.96□□□□□ -2.1
BLOC1S4Q9NUP1 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.96□□□□□ -2.1
BLOC1S4Q9NUP1 AC005899.2-201ENST00000584353 90 ntBASIC1.96□□□□□ -2.1
BLOC1S4Q9NUP1 AC126177.8-201ENST00000618339 1015 ntBASIC1.96□□□□□ -2.1
BLOC1S4Q9NUP1 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.96□□□□□ -2.1
BLOC1S4Q9NUP1 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.96□□□□□ -2.1
BLOC1S4Q9NUP1 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.96□□□□□ -2.1
BLOC1S4Q9NUP1 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
BLOC1S4Q9NUP1 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
BLOC1S4Q9NUP1 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
BLOC1S4Q9NUP1 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
BLOC1S4Q9NUP1 RNU6-1059P-201ENST00000363752 98 ntBASIC1.95□□□□□ -2.1
BLOC1S4Q9NUP1 RNU6-1240P-201ENST00000365155 104 ntBASIC1.95□□□□□ -2.1
BLOC1S4Q9NUP1 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.95□□□□□ -2.1
BLOC1S4Q9NUP1 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.95□□□□□ -2.1
BLOC1S4Q9NUP1 RPL23AP63-201ENST00000498752 471 ntBASIC1.95□□□□□ -2.1
BLOC1S4Q9NUP1 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
BLOC1S4Q9NUP1 AC026782.1-201ENST00000512952 449 ntBASIC1.95□□□□□ -2.1
BLOC1S4Q9NUP1 AC024995.1-201ENST00000523014 93 ntBASIC1.95□□□□□ -2.1
BLOC1S4Q9NUP1 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.95□□□□□ -2.1
BLOC1S4Q9NUP1 AC084364.2-201ENST00000546924 395 ntBASIC1.95□□□□□ -2.1
BLOC1S4Q9NUP1 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.95□□□□□ -2.1
BLOC1S4Q9NUP1 uc_338.20-201ENST00000621563 178 ntBASIC1.95□□□□□ -2.1
BLOC1S4Q9NUP1 AC006001.4-201ENST00000622243 395 ntBASIC1.95□□□□□ -2.1
BLOC1S4Q9NUP1 Y_RNA.2-201ENST00000362330 96 ntBASIC1.94□□□□□ -2.1
BLOC1S4Q9NUP1 RNU6-1266P-201ENST00000362794 105 ntBASIC1.94□□□□□ -2.1
BLOC1S4Q9NUP1 SNORA63D-201ENST00000364359 132 ntBASIC1.94□□□□□ -2.1
BLOC1S4Q9NUP1 RNU6-601P-201ENST00000384540 107 ntBASIC1.94□□□□□ -2.1
BLOC1S4Q9NUP1 RNU1-139P-201ENST00000391307 165 ntBASIC1.94□□□□□ -2.1
BLOC1S4Q9NUP1 MIR1261-201ENST00000408659 82 ntBASIC1.94□□□□□ -2.1
BLOC1S4Q9NUP1 RNU6-1050P-201ENST00000410388 107 ntBASIC1.94□□□□□ -2.1
BLOC1S4Q9NUP1 USP9YP16-201ENST00000430287 407 ntBASIC1.94□□□□□ -2.1
BLOC1S4Q9NUP1 AC245047.4-201ENST00000433189 144 ntBASIC1.94□□□□□ -2.1
BLOC1S4Q9NUP1 HMGN2P34-201ENST00000437647 269 ntBASIC1.94□□□□□ -2.1
BLOC1S4Q9NUP1 USP9YP23-201ENST00000455085 407 ntBASIC1.94□□□□□ -2.1
BLOC1S4Q9NUP1 HMGN2P23-201ENST00000456759 269 ntBASIC1.94□□□□□ -2.1
BLOC1S4Q9NUP1 AP000870.1-201ENST00000472927 406 ntBASIC1.94□□□□□ -2.1
BLOC1S4Q9NUP1 CYCSP23-201ENST00000519781 313 ntBASIC1.94□□□□□ -2.1
BLOC1S4Q9NUP1 AC084782.3-201ENST00000612282 578 ntBASIC1.94□□□□□ -2.1
BLOC1S4Q9NUP1 PISRT1.1-201ENST00000616930 107 ntBASIC1.94□□□□□ -2.1
BLOC1S4Q9NUP1 AC084768.2-201ENST00000622736 221 ntBASIC1.94□□□□□ -2.1
BLOC1S4Q9NUP1 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.93□□□□□ -2.1
BLOC1S4Q9NUP1 MIR1267-201ENST00000408723 78 ntBASIC1.93□□□□□ -2.1
BLOC1S4Q9NUP1 RNA5SP504-201ENST00000410676 117 ntBASIC1.93□□□□□ -2.1
BLOC1S4Q9NUP1 CYCSP49-201ENST00000420810 319 ntBASIC1.93□□□□□ -2.1
BLOC1S4Q9NUP1 MTCYBP10-201ENST00000424905 650 ntBASIC1.93□□□□□ -2.1
BLOC1S4Q9NUP1 HSPE1P9-201ENST00000440046 311 ntBASIC1.93□□□□□ -2.1
BLOC1S4Q9NUP1 AC010095.1-201ENST00000443543 144 ntBASIC1.93□□□□□ -2.1
BLOC1S4Q9NUP1 RPL31P58-201ENST00000469001 379 ntBASIC1.93□□□□□ -2.1
BLOC1S4Q9NUP1 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.93□□□□□ -2.1
BLOC1S4Q9NUP1 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.93□□□□□ -2.1
BLOC1S4Q9NUP1 AC025647.1-201ENST00000517879 253 ntBASIC1.93□□□□□ -2.1
BLOC1S4Q9NUP1 CBX3P8-201ENST00000532412 525 ntBASIC1.93□□□□□ -2.1
BLOC1S4Q9NUP1 AC090617.3-201ENST00000573670 475 ntBASIC1.93□□□□□ -2.1
BLOC1S4Q9NUP1 uc_338.5-201ENST00000611839 155 ntBASIC1.93□□□□□ -2.1
BLOC1S4Q9NUP1 AC010999.1-201ENST00000611856 324 ntBASIC1.93□□□□□ -2.1
BLOC1S4Q9NUP1 AL133216.2-202ENST00000634512 349 ntBASIC1.93□□□□□ -2.1
BLOC1S4Q9NUP1 AC099654.5-201ENST00000636479 350 ntBASIC1.93□□□□□ -2.1
BLOC1S4Q9NUP1 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
BLOC1S4Q9NUP1 CASC19-280ENST00000642102 1351 ntBASIC1.93□□□□□ -2.1
BLOC1S4Q9NUP1 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
BLOC1S4Q9NUP1 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
BLOC1S4Q9NUP1 Y_RNA.166-201ENST00000363730 102 ntBASIC1.92□□□□□ -2.1
BLOC1S4Q9NUP1 Y_RNA.248-201ENST00000364501 109 ntBASIC1.92□□□□□ -2.1
BLOC1S4Q9NUP1 MIR10B-201ENST00000385011 110 ntBASIC1.92□□□□□ -2.1
BLOC1S4Q9NUP1 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
BLOC1S4Q9NUP1 Y_RNA.594-201ENST00000410373 140 ntBASIC1.92□□□□□ -2.1
BLOC1S4Q9NUP1 Y_RNA.599-201ENST00000410489 109 ntBASIC1.92□□□□□ -2.1
BLOC1S4Q9NUP1 RPL31P63-201ENST00000422565 375 ntBASIC1.92□□□□□ -2.1
BLOC1S4Q9NUP1 MTND3P23-201ENST00000431980 347 ntBASIC1.92□□□□□ -2.1
BLOC1S4Q9NUP1 UBE2V1P7-201ENST00000446395 340 ntBASIC1.92□□□□□ -2.1
BLOC1S4Q9NUP1 snoU13.9-201ENST00000458927 103 ntBASIC1.92□□□□□ -2.1
BLOC1S4Q9NUP1 AC091179.3-201ENST00000474761 144 ntBASIC1.92□□□□□ -2.1
BLOC1S4Q9NUP1 AC116353.2-201ENST00000505332 712 ntBASIC1.92□□□□□ -2.1
BLOC1S4Q9NUP1 RNU6-295P-201ENST00000516901 104 ntBASIC1.92□□□□□ -2.1
BLOC1S4Q9NUP1 RNU6-250P-201ENST00000516958 103 ntBASIC1.92□□□□□ -2.1
BLOC1S4Q9NUP1 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.92□□□□□ -2.1
BLOC1S4Q9NUP1 UBL5P4-201ENST00000562584 236 ntBASIC1.92□□□□□ -2.1
BLOC1S4Q9NUP1 MIR5695-201ENST00000579717 85 ntBASIC1.92□□□□□ -2.1
BLOC1S4Q9NUP1 AL355802.3-201ENST00000607571 545 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 244.5 ms