Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.03□□□□□ -2.08
SIX2Q9NPC8 CBX3P7-201ENST00000532876 502 ntBASIC2.03□□□□□ -2.08
SIX2Q9NPC8 AC093023.1-201ENST00000547375 507 ntBASIC2.03□□□□□ -2.08
SIX2Q9NPC8 AC023824.2-201ENST00000566185 400 ntBASIC2.03□□□□□ -2.08
SIX2Q9NPC8 MIR5694-201ENST00000581190 76 ntBASIC2.03□□□□□ -2.08
SIX2Q9NPC8 MIR4435-1-201ENST00000582552 80 ntBASIC2.03□□□□□ -2.08
SIX2Q9NPC8 AC104695.3-201ENST00000604052 296 ntBASIC2.03□□□□□ -2.08
SIX2Q9NPC8 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.03□□□□□ -2.08
SIX2Q9NPC8 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.03□□□□□ -2.08
SIX2Q9NPC8 RNA5SP361-201ENST00000362686 118 ntBASIC2.02□□□□□ -2.09
SIX2Q9NPC8 RNU5F-3P-201ENST00000363767 117 ntBASIC2.02□□□□□ -2.09
SIX2Q9NPC8 RNU6-879P-201ENST00000364328 108 ntBASIC2.02□□□□□ -2.09
SIX2Q9NPC8 SNORA63C-201ENST00000364578 129 ntBASIC2.02□□□□□ -2.09
SIX2Q9NPC8 RNU6-26P-201ENST00000383985 107 ntBASIC2.02□□□□□ -2.09
SIX2Q9NPC8 RNU6-708P-201ENST00000384217 107 ntBASIC2.02□□□□□ -2.09
SIX2Q9NPC8 RNY3P4-201ENST00000384428 101 ntBASIC2.02□□□□□ -2.09
SIX2Q9NPC8 MIR320B2-201ENST00000408479 138 ntBASIC2.02□□□□□ -2.09
SIX2Q9NPC8 RNU6-1001P-201ENST00000411265 100 ntBASIC2.02□□□□□ -2.09
SIX2Q9NPC8 MTCO3P19-201ENST00000415864 321 ntBASIC2.02□□□□□ -2.09
SIX2Q9NPC8 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.02□□□□□ -2.09
SIX2Q9NPC8 SUMO1P4-201ENST00000429430 302 ntBASIC2.02□□□□□ -2.09
SIX2Q9NPC8 AC003989.2-201ENST00000440224 169 ntBASIC2.02□□□□□ -2.09
SIX2Q9NPC8 AC004386.2-201ENST00000441858 148 ntBASIC2.02□□□□□ -2.09
SIX2Q9NPC8 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.02□□□□□ -2.09
SIX2Q9NPC8 RPS29P11-201ENST00000496507 171 ntBASIC2.02□□□□□ -2.09
SIX2Q9NPC8 AC093852.1-201ENST00000503587 266 ntBASIC2.02□□□□□ -2.09
SIX2Q9NPC8 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.02□□□□□ -2.09
SIX2Q9NPC8 MIR449C-201ENST00000516047 92 ntBASIC2.02□□□□□ -2.09
SIX2Q9NPC8 RNU1-41P-201ENST00000516161 162 ntBASIC2.02□□□□□ -2.09
SIX2Q9NPC8 RNU1-48P-201ENST00000516400 162 ntBASIC2.02□□□□□ -2.09
SIX2Q9NPC8 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.02□□□□□ -2.09
SIX2Q9NPC8 AC121758.2-201ENST00000553271 193 ntBASIC2.02□□□□□ -2.09
SIX2Q9NPC8 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.02□□□□□ -2.09
SIX2Q9NPC8 MIR4648-201ENST00000580107 72 ntBASIC2.02□□□□□ -2.09
SIX2Q9NPC8 MIR5194-201ENST00000582634 120 ntBASIC2.02□□□□□ -2.09
SIX2Q9NPC8 MIR4448-201ENST00000584360 86 ntBASIC2.02□□□□□ -2.09
SIX2Q9NPC8 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.02□□□□□ -2.09
SIX2Q9NPC8 AL355297.2-201ENST00000604792 129 ntBASIC2.02□□□□□ -2.09
SIX2Q9NPC8 RPL17P51-201ENST00000605218 238 ntBASIC2.02□□□□□ -2.09
SIX2Q9NPC8 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.02□□□□□ -2.09
SIX2Q9NPC8 TCL6_2.1-201ENST00000615162 119 ntBASIC2.02□□□□□ -2.09
SIX2Q9NPC8 AL449363.1-201ENST00000617815 186 ntBASIC2.02□□□□□ -2.09
SIX2Q9NPC8 AL162373.1-201ENST00000620433 407 ntBASIC2.02□□□□□ -2.09
SIX2Q9NPC8 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
SIX2Q9NPC8 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
SIX2Q9NPC8 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.01□□□□□ -2.09
SIX2Q9NPC8 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
SIX2Q9NPC8 Y_RNA.27-201ENST00000362540 103 ntBASIC2.01□□□□□ -2.09
SIX2Q9NPC8 RNU1-76P-201ENST00000362903 159 ntBASIC2.01□□□□□ -2.09
SIX2Q9NPC8 SNORD14.1-201ENST00000365609 90 ntBASIC2.01□□□□□ -2.09
SIX2Q9NPC8 RNU6-546P-201ENST00000383991 107 ntBASIC2.01□□□□□ -2.09
SIX2Q9NPC8 RNU6-738P-201ENST00000384531 106 ntBASIC2.01□□□□□ -2.09
SIX2Q9NPC8 Y_RNA.527-201ENST00000384573 102 ntBASIC2.01□□□□□ -2.09
SIX2Q9NPC8 RNU6-823P-201ENST00000391042 103 ntBASIC2.01□□□□□ -2.09
SIX2Q9NPC8 RNU2-32P-201ENST00000411193 191 ntBASIC2.01□□□□□ -2.09
SIX2Q9NPC8 RN7SKP192-201ENST00000411291 327 ntBASIC2.01□□□□□ -2.09
SIX2Q9NPC8 AC113618.1-201ENST00000416747 285 ntBASIC2.01□□□□□ -2.09
SIX2Q9NPC8 HMGN2P38-201ENST00000423806 265 ntBASIC2.01□□□□□ -2.09
SIX2Q9NPC8 AC009237.7-201ENST00000447357 229 ntBASIC2.01□□□□□ -2.09
SIX2Q9NPC8 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.01□□□□□ -2.09
SIX2Q9NPC8 RNU2-44P-201ENST00000516795 194 ntBASIC2.01□□□□□ -2.09
SIX2Q9NPC8 AC022616.4-201ENST00000522985 181 ntBASIC2.01□□□□□ -2.09
SIX2Q9NPC8 AC040926.1-201ENST00000530195 238 ntBASIC2.01□□□□□ -2.09
SIX2Q9NPC8 AC022616.8-201ENST00000533569 253 ntBASIC2.01□□□□□ -2.09
SIX2Q9NPC8 MIR5006-201ENST00000583027 110 ntBASIC2.01□□□□□ -2.09
SIX2Q9NPC8 AL360085.1-201ENST00000604713 532 ntBASIC2.01□□□□□ -2.09
SIX2Q9NPC8 AC010999.1-201ENST00000611856 324 ntBASIC2.01□□□□□ -2.09
SIX2Q9NPC8 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.01□□□□□ -2.09
SIX2Q9NPC8 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2□□□□□ -2.09
SIX2Q9NPC8 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
SIX2Q9NPC8 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2□□□□□ -2.09
SIX2Q9NPC8 RNU1-62P-201ENST00000362599 164 ntBASIC2□□□□□ -2.09
SIX2Q9NPC8 Y_RNA.162-201ENST00000363683 102 ntBASIC2□□□□□ -2.09
SIX2Q9NPC8 Y_RNA.424-201ENST00000384063 103 ntBASIC2□□□□□ -2.09
SIX2Q9NPC8 RNU4-52P-201ENST00000384209 138 ntBASIC2□□□□□ -2.09
SIX2Q9NPC8 Y_RNA.455-201ENST00000384230 98 ntBASIC2□□□□□ -2.09
SIX2Q9NPC8 Y_RNA.526-201ENST00000384572 110 ntBASIC2□□□□□ -2.09
SIX2Q9NPC8 MIR329-1-201ENST00000385028 80 ntBASIC2□□□□□ -2.09
SIX2Q9NPC8 RNU6-985P-201ENST00000410182 104 ntBASIC2□□□□□ -2.09
SIX2Q9NPC8 RNU2-48P-201ENST00000410694 191 ntBASIC2□□□□□ -2.09
SIX2Q9NPC8 AC091179.3-201ENST00000474761 144 ntBASIC2□□□□□ -2.09
SIX2Q9NPC8 AC018868.1-201ENST00000491307 315 ntBASIC2□□□□□ -2.09
SIX2Q9NPC8 RPS29P21-201ENST00000496272 170 ntBASIC2□□□□□ -2.09
SIX2Q9NPC8 RNU6-344P-201ENST00000516635 111 ntBASIC2□□□□□ -2.09
SIX2Q9NPC8 RN7SKP49-201ENST00000516675 260 ntBASIC2□□□□□ -2.09
SIX2Q9NPC8 RNU6-965P-201ENST00000516721 96 ntBASIC2□□□□□ -2.09
SIX2Q9NPC8 RNU6-1098P-201ENST00000516772 96 ntBASIC2□□□□□ -2.09
SIX2Q9NPC8 RNA5SP364-201ENST00000516938 78 ntBASIC2□□□□□ -2.09
SIX2Q9NPC8 Y_RNA.721-201ENST00000517207 102 ntBASIC2□□□□□ -2.09
SIX2Q9NPC8 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2□□□□□ -2.09
SIX2Q9NPC8 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2□□□□□ -2.09
SIX2Q9NPC8 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2□□□□□ -2.09
SIX2Q9NPC8 MIR6895-201ENST00000613497 78 ntBASIC2□□□□□ -2.09
SIX2Q9NPC8 DLEU2_2.2-201ENST00000615474 90 ntBASIC2□□□□□ -2.09
SIX2Q9NPC8 U4atac.1-201ENST00000618345 95 ntBASIC2□□□□□ -2.09
SIX2Q9NPC8 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.99□□□□□ -2.09
SIX2Q9NPC8 Y_RNA.179-201ENST00000363844 90 ntBASIC1.99□□□□□ -2.09
SIX2Q9NPC8 RNU6-450P-201ENST00000364654 107 ntBASIC1.99□□□□□ -2.09
SIX2Q9NPC8 RNU6-234P-201ENST00000365229 104 ntBASIC1.99□□□□□ -2.09
SIX2Q9NPC8 Y_RNA.389-201ENST00000383924 113 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms