Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.21□□□□□ -1.9
CD248Q9HCU0 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
CD248Q9HCU0 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
CD248Q9HCU0 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.2□□□□□ -1.9
CD248Q9HCU0 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CD248Q9HCU0 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
CD248Q9HCU0 RNU6-1141P-201ENST00000364520 107 ntBASIC3.2□□□□□ -1.9
CD248Q9HCU0 RNU4-17P-201ENST00000365598 141 ntBASIC3.2□□□□□ -1.9
CD248Q9HCU0 SNORA36A-201ENST00000384221 132 ntBASIC3.2□□□□□ -1.9
CD248Q9HCU0 Y_RNA.498-201ENST00000384460 102 ntBASIC3.2□□□□□ -1.9
CD248Q9HCU0 COTL1P1-201ENST00000422309 375 ntBASIC3.2□□□□□ -1.9
CD248Q9HCU0 AC112220.1-201ENST00000434628 355 ntBASIC3.2□□□□□ -1.9
CD248Q9HCU0 RPL39P40-201ENST00000445481 146 ntBASIC3.2□□□□□ -1.9
CD248Q9HCU0 snoU13.6-201ENST00000458785 104 ntBASIC3.2□□□□□ -1.9
CD248Q9HCU0 AL121594.1-201ENST00000475906 575 ntBASIC3.2□□□□□ -1.9
CD248Q9HCU0 AC010409.1-201ENST00000487382 476 ntBASIC3.2□□□□□ -1.9
CD248Q9HCU0 RPPH1-2P-201ENST00000516688 293 ntBASIC3.2□□□□□ -1.9
CD248Q9HCU0 AC018448.1-201ENST00000552843 316 ntBASIC3.2□□□□□ -1.9
CD248Q9HCU0 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC3.2□□□□□ -1.9
CD248Q9HCU0 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CD248Q9HCU0 MIR622-201ENST00000638396 96 ntBASIC3.2□□□□□ -1.9
CD248Q9HCU0 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.19□□□□□ -1.9
CD248Q9HCU0 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.19□□□□□ -1.9
CD248Q9HCU0 MTND5P35-201ENST00000557537 1720 ntBASIC3.19□□□□□ -1.9
CD248Q9HCU0 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CD248Q9HCU0 Y_RNA.101-201ENST00000363154 102 ntBASIC3.19□□□□□ -1.9
CD248Q9HCU0 RNA5SP205-201ENST00000364653 136 ntBASIC3.19□□□□□ -1.9
CD248Q9HCU0 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CD248Q9HCU0 MIR569-201ENST00000385228 96 ntBASIC3.19□□□□□ -1.9
CD248Q9HCU0 RNU6-1248P-201ENST00000391096 64 ntBASIC3.19□□□□□ -1.9
CD248Q9HCU0 MIR887-201ENST00000401258 79 ntBASIC3.19□□□□□ -1.9
CD248Q9HCU0 RN7SKP61-201ENST00000410642 295 ntBASIC3.19□□□□□ -1.9
CD248Q9HCU0 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.19□□□□□ -1.9
CD248Q9HCU0 AC099548.1-201ENST00000421443 426 ntBASIC3.19□□□□□ -1.9
CD248Q9HCU0 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.19□□□□□ -1.9
CD248Q9HCU0 AC092427.1-202ENST00000430569 476 ntBASIC3.19□□□□□ -1.9
CD248Q9HCU0 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.19□□□□□ -1.9
CD248Q9HCU0 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.19□□□□□ -1.9
CD248Q9HCU0 RNA5SP272-201ENST00000516095 111 ntBASIC3.19□□□□□ -1.9
CD248Q9HCU0 RNU6-155P-201ENST00000516347 100 ntBASIC3.19□□□□□ -1.9
CD248Q9HCU0 CR383656.8-201ENST00000549046 145 ntBASIC3.19□□□□□ -1.9
CD248Q9HCU0 AC103810.1-201ENST00000579873 453 ntBASIC3.19□□□□□ -1.9
CD248Q9HCU0 MIR4298-201ENST00000584380 73 ntBASIC3.19□□□□□ -1.9
CD248Q9HCU0 FTX_3.1-201ENST00000610451 147 ntBASIC3.19□□□□□ -1.9
CD248Q9HCU0 uc_338.25-201ENST00000613756 156 ntBASIC3.19□□□□□ -1.9
CD248Q9HCU0 AC004467.1-201ENST00000615678 330 ntBASIC3.19□□□□□ -1.9
CD248Q9HCU0 U2.21-201ENST00000637295 81 ntBASIC3.19□□□□□ -1.9
CD248Q9HCU0 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
CD248Q9HCU0 AC108206.1-201ENST00000570186 4159 ntBASIC3.19□□□□□ -1.9
CD248Q9HCU0 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CD248Q9HCU0 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
CD248Q9HCU0 Y_RNA.179-201ENST00000363844 90 ntBASIC3.18□□□□□ -1.9
CD248Q9HCU0 RNU6-818P-201ENST00000364837 108 ntBASIC3.18□□□□□ -1.9
CD248Q9HCU0 RNU1-100P-201ENST00000365255 165 ntBASIC3.18□□□□□ -1.9
CD248Q9HCU0 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.18□□□□□ -1.9
CD248Q9HCU0 RPL26P27-201ENST00000414397 437 ntBASIC3.18□□□□□ -1.9
CD248Q9HCU0 RAB28P5-201ENST00000427490 651 ntBASIC3.18□□□□□ -1.9
CD248Q9HCU0 AC078809.1-201ENST00000427601 140 ntBASIC3.18□□□□□ -1.9
CD248Q9HCU0 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.18□□□□□ -1.9
CD248Q9HCU0 CST9LP2-201ENST00000437612 320 ntBASIC3.18□□□□□ -1.9
CD248Q9HCU0 RPL37P4-201ENST00000448908 268 ntBASIC3.18□□□□□ -1.9
CD248Q9HCU0 UBE2DNL-203ENST00000474922 222 ntBASIC3.18□□□□□ -1.9
CD248Q9HCU0 RPL23AP94-201ENST00000512518 302 ntBASIC3.18□□□□□ -1.9
CD248Q9HCU0 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CD248Q9HCU0 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.18□□□□□ -1.9
CD248Q9HCU0 AC021231.3-201ENST00000558497 370 ntBASIC3.18□□□□□ -1.9
CD248Q9HCU0 MIR548X2-201ENST00000579776 100 ntBASIC3.18□□□□□ -1.9
CD248Q9HCU0 DEFB117-201ENST00000602356 141 ntBASIC3.18□□□□□ -1.9
CD248Q9HCU0 AL359198.2-201ENST00000611836 194 ntBASIC3.18□□□□□ -1.9
CD248Q9HCU0 AC091932.3-201ENST00000624223 323 ntBASIC3.18□□□□□ -1.9
CD248Q9HCU0 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CD248Q9HCU0 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CD248Q9HCU0 AC092268.1-201ENST00000342691 405 ntBASIC3.17□□□□□ -1.9
CD248Q9HCU0 RNU6-778P-201ENST00000363269 103 ntBASIC3.17□□□□□ -1.9
CD248Q9HCU0 Y_RNA.273-201ENST00000364703 102 ntBASIC3.17□□□□□ -1.9
CD248Q9HCU0 RNU6-215P-201ENST00000365169 102 ntBASIC3.17□□□□□ -1.9
CD248Q9HCU0 Y_RNA.353-201ENST00000365440 108 ntBASIC3.17□□□□□ -1.9
CD248Q9HCU0 RNU1-73P-201ENST00000383971 164 ntBASIC3.17□□□□□ -1.9
CD248Q9HCU0 SNORA40-201ENST00000388090 126 ntBASIC3.17□□□□□ -1.9
CD248Q9HCU0 RNU6-239P-201ENST00000390990 99 ntBASIC3.17□□□□□ -1.9
CD248Q9HCU0 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.17□□□□□ -1.9
CD248Q9HCU0 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.17□□□□□ -1.9
CD248Q9HCU0 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.17□□□□□ -1.9
CD248Q9HCU0 RPS20P10-201ENST00000451209 253 ntBASIC3.17□□□□□ -1.9
CD248Q9HCU0 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.17□□□□□ -1.9
CD248Q9HCU0 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.17□□□□□ -1.9
CD248Q9HCU0 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.17□□□□□ -1.9
CD248Q9HCU0 MIR4672-201ENST00000583126 81 ntBASIC3.17□□□□□ -1.9
CD248Q9HCU0 MIR6134-201ENST00000617606 109 ntBASIC3.17□□□□□ -1.9
CD248Q9HCU0 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.17□□□□□ -1.9
CD248Q9HCU0 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
CD248Q9HCU0 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
CD248Q9HCU0 AC010332.2-201ENST00000613083 1904 ntBASIC3.17□□□□□ -1.9
CD248Q9HCU0 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CD248Q9HCU0 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.16□□□□□ -1.9
CD248Q9HCU0 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CD248Q9HCU0 RNU6-1285P-201ENST00000363480 105 ntBASIC3.16□□□□□ -1.9
CD248Q9HCU0 Y_RNA.261-201ENST00000364631 102 ntBASIC3.16□□□□□ -1.9
CD248Q9HCU0 RNU6-275P-201ENST00000364910 107 ntBASIC3.16□□□□□ -1.9
CD248Q9HCU0 RNU6-1310P-201ENST00000384153 107 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 184.5 ms