Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 Y_RNA.292-201ENST00000364904 97 ntBASIC2.61□□□□□ -1.99
EBF3Q9H4W6 RNU6-326P-201ENST00000365480 107 ntBASIC2.61□□□□□ -1.99
EBF3Q9H4W6 RNU1-109P-201ENST00000383960 147 ntBASIC2.61□□□□□ -1.99
EBF3Q9H4W6 Y_RNA.418-201ENST00000384029 102 ntBASIC2.61□□□□□ -1.99
EBF3Q9H4W6 RNU6-281P-201ENST00000384212 103 ntBASIC2.61□□□□□ -1.99
EBF3Q9H4W6 SNORA36A-201ENST00000384221 132 ntBASIC2.61□□□□□ -1.99
EBF3Q9H4W6 MIR518C-201ENST00000384822 101 ntBASIC2.61□□□□□ -1.99
EBF3Q9H4W6 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
EBF3Q9H4W6 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.61□□□□□ -1.99
EBF3Q9H4W6 RNU6-1001P-201ENST00000411265 100 ntBASIC2.61□□□□□ -1.99
EBF3Q9H4W6 RPL19P1-201ENST00000411635 428 ntBASIC2.61□□□□□ -1.99
EBF3Q9H4W6 AC096649.2-201ENST00000416186 393 ntBASIC2.61□□□□□ -1.99
EBF3Q9H4W6 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.61□□□□□ -1.99
EBF3Q9H4W6 AL365496.1-201ENST00000426885 215 ntBASIC2.61□□□□□ -1.99
EBF3Q9H4W6 WARS2P1-201ENST00000429678 537 ntBASIC2.61□□□□□ -1.99
EBF3Q9H4W6 RPL23AP3-201ENST00000453844 468 ntBASIC2.61□□□□□ -1.99
EBF3Q9H4W6 AC073901.1-201ENST00000462471 408 ntBASIC2.61□□□□□ -1.99
EBF3Q9H4W6 SEPT14P8-201ENST00000508026 178 ntBASIC2.61□□□□□ -1.99
EBF3Q9H4W6 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.61□□□□□ -1.99
EBF3Q9H4W6 RNU5F-8P-201ENST00000515941 111 ntBASIC2.61□□□□□ -1.99
EBF3Q9H4W6 RNU6-966P-201ENST00000516479 104 ntBASIC2.61□□□□□ -1.99
EBF3Q9H4W6 RNU6-567P-201ENST00000516746 107 ntBASIC2.61□□□□□ -1.99
EBF3Q9H4W6 RNU2-31P-201ENST00000516954 155 ntBASIC2.61□□□□□ -1.99
EBF3Q9H4W6 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.61□□□□□ -1.99
EBF3Q9H4W6 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.61□□□□□ -1.99
EBF3Q9H4W6 AC091152.3-201ENST00000604227 325 ntBASIC2.61□□□□□ -1.99
EBF3Q9H4W6 SNORD113-5-201ENST00000607261 78 ntBASIC2.61□□□□□ -1.99
EBF3Q9H4W6 AL137847.3-201ENST00000611521 109 ntBASIC2.61□□□□□ -1.99
EBF3Q9H4W6 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.61□□□□□ -1.99
EBF3Q9H4W6 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.61□□□□□ -1.99
EBF3Q9H4W6 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
EBF3Q9H4W6 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
EBF3Q9H4W6 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.6□□□□□ -1.99
EBF3Q9H4W6 RNU6-622P-201ENST00000384272 103 ntBASIC2.6□□□□□ -1.99
EBF3Q9H4W6 RNU6-378P-201ENST00000384324 107 ntBASIC2.6□□□□□ -1.99
EBF3Q9H4W6 MIR329-1-201ENST00000385028 80 ntBASIC2.6□□□□□ -1.99
EBF3Q9H4W6 MIR153-2-201ENST00000385225 87 ntBASIC2.6□□□□□ -1.99
EBF3Q9H4W6 MIR548I2-201ENST00000408348 149 ntBASIC2.6□□□□□ -1.99
EBF3Q9H4W6 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.6□□□□□ -1.99
EBF3Q9H4W6 AL606753.1-201ENST00000427435 87 ntBASIC2.6□□□□□ -1.99
EBF3Q9H4W6 UBBP3-201ENST00000445497 241 ntBASIC2.6□□□□□ -1.99
EBF3Q9H4W6 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.6□□□□□ -1.99
EBF3Q9H4W6 RNU6-346P-201ENST00000516288 111 ntBASIC2.6□□□□□ -1.99
EBF3Q9H4W6 RPL21P9-201ENST00000556149 474 ntBASIC2.6□□□□□ -1.99
EBF3Q9H4W6 AC055872.1-201ENST00000570978 278 ntBASIC2.6□□□□□ -1.99
EBF3Q9H4W6 MIR4282-201ENST00000583613 67 ntBASIC2.6□□□□□ -1.99
EBF3Q9H4W6 AL162424.1-201ENST00000602325 221 ntBASIC2.6□□□□□ -1.99
EBF3Q9H4W6 AL357075.2-201ENST00000614906 189 ntBASIC2.6□□□□□ -1.99
EBF3Q9H4W6 AC002064.3-201ENST00000623448 346 ntBASIC2.6□□□□□ -1.99
EBF3Q9H4W6 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
EBF3Q9H4W6 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
EBF3Q9H4W6 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
EBF3Q9H4W6 ZNF658B-202ENST00000615961 3375 ntBASIC2.59□□□□□ -1.99
EBF3Q9H4W6 RNU6-626P-201ENST00000363354 107 ntBASIC2.59□□□□□ -1.99
EBF3Q9H4W6 SNORD56.5-201ENST00000364281 72 ntBASIC2.59□□□□□ -1.99
EBF3Q9H4W6 RNU6-1141P-201ENST00000364520 107 ntBASIC2.59□□□□□ -1.99
EBF3Q9H4W6 Y_RNA.275-201ENST00000364726 110 ntBASIC2.59□□□□□ -1.99
EBF3Q9H4W6 SNORD113-1-201ENST00000365321 69 ntBASIC2.59□□□□□ -1.99
EBF3Q9H4W6 RNU6-20P-201ENST00000384106 107 ntBASIC2.59□□□□□ -1.99
EBF3Q9H4W6 RNU6-748P-201ENST00000384648 107 ntBASIC2.59□□□□□ -1.99
EBF3Q9H4W6 Y_RNA.569-201ENST00000384749 103 ntBASIC2.59□□□□□ -1.99
EBF3Q9H4W6 Y_RNA.570-201ENST00000384750 101 ntBASIC2.59□□□□□ -1.99
EBF3Q9H4W6 RNU6-750P-201ENST00000390946 107 ntBASIC2.59□□□□□ -1.99
EBF3Q9H4W6 RNU6-918P-201ENST00000391219 106 ntBASIC2.59□□□□□ -1.99
EBF3Q9H4W6 AL033519.2-201ENST00000403958 392 ntBASIC2.59□□□□□ -1.99
EBF3Q9H4W6 RNU4-53P-201ENST00000410828 140 ntBASIC2.59□□□□□ -1.99
EBF3Q9H4W6 PTGES3P4-201ENST00000426243 356 ntBASIC2.59□□□□□ -1.99
EBF3Q9H4W6 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.59□□□□□ -1.99
EBF3Q9H4W6 CR769767.1-201ENST00000436337 346 ntBASIC2.59□□□□□ -1.99
EBF3Q9H4W6 AC010095.1-201ENST00000443543 144 ntBASIC2.59□□□□□ -1.99
EBF3Q9H4W6 AC009237.7-201ENST00000447357 229 ntBASIC2.59□□□□□ -1.99
EBF3Q9H4W6 RNY3P16-201ENST00000516338 101 ntBASIC2.59□□□□□ -1.99
EBF3Q9H4W6 RN7SKP49-201ENST00000516675 260 ntBASIC2.59□□□□□ -1.99
EBF3Q9H4W6 RNA5SP402-201ENST00000517148 110 ntBASIC2.59□□□□□ -1.99
EBF3Q9H4W6 MTND5P41-201ENST00000517498 206 ntBASIC2.59□□□□□ -1.99
EBF3Q9H4W6 AK6P2-201ENST00000549020 471 ntBASIC2.59□□□□□ -1.99
EBF3Q9H4W6 MIR5695-201ENST00000579717 85 ntBASIC2.59□□□□□ -1.99
EBF3Q9H4W6 AC090897.2-201ENST00000581715 130 ntBASIC2.59□□□□□ -1.99
EBF3Q9H4W6 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.59□□□□□ -1.99
EBF3Q9H4W6 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.59□□□□□ -1.99
EBF3Q9H4W6 RNU6-91P-201ENST00000607774 107 ntBASIC2.59□□□□□ -1.99
EBF3Q9H4W6 AC005296.1-201ENST00000616145 209 ntBASIC2.59□□□□□ -1.99
EBF3Q9H4W6 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
EBF3Q9H4W6 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.59□□□□□ -2
EBF3Q9H4W6 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
EBF3Q9H4W6 Y_RNA.319-201ENST00000365138 92 ntBASIC2.58□□□□□ -2
EBF3Q9H4W6 RNU6-1145P-201ENST00000384246 107 ntBASIC2.58□□□□□ -2
EBF3Q9H4W6 RNU6-19P-201ENST00000384718 107 ntBASIC2.58□□□□□ -2
EBF3Q9H4W6 RNA5SP210-201ENST00000391034 120 ntBASIC2.58□□□□□ -2
EBF3Q9H4W6 RNU6-159P-201ENST00000391080 106 ntBASIC2.58□□□□□ -2
EBF3Q9H4W6 SNORA53-201ENST00000391141 249 ntBASIC2.58□□□□□ -2
EBF3Q9H4W6 FO393413.1-201ENST00000402892 195 ntBASIC2.58□□□□□ -2
EBF3Q9H4W6 RN7SKP61-201ENST00000410642 295 ntBASIC2.58□□□□□ -2
EBF3Q9H4W6 Z98742.3-201ENST00000418637 326 ntBASIC2.58□□□□□ -2
EBF3Q9H4W6 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.58□□□□□ -2
EBF3Q9H4W6 MTCO1P5-201ENST00000433573 344 ntBASIC2.58□□□□□ -2
EBF3Q9H4W6 MRPS10P1-201ENST00000448483 130 ntBASIC2.58□□□□□ -2
EBF3Q9H4W6 AC012308.1-201ENST00000451232 178 ntBASIC2.58□□□□□ -2
EBF3Q9H4W6 COX6CP14-201ENST00000469580 174 ntBASIC2.58□□□□□ -2
EBF3Q9H4W6 AC091959.1-201ENST00000495857 238 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 133.8 ms