Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 RNU6-856P-201ENST00000516959 98 ntBASIC1.73□□□□□ -2.13
UBQLN3Q9H347 MIR5695-201ENST00000579717 85 ntBASIC1.73□□□□□ -2.13
UBQLN3Q9H347 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.73□□□□□ -2.13
UBQLN3Q9H347 AC005014.2-201ENST00000607795 599 ntBASIC1.73□□□□□ -2.13
UBQLN3Q9H347 MIR6845-201ENST00000613182 61 ntBASIC1.73□□□□□ -2.13
UBQLN3Q9H347 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.73□□□□□ -2.13
UBQLN3Q9H347 AC022513.1-201ENST00000624512 117 ntBASIC1.73□□□□□ -2.13
UBQLN3Q9H347 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
UBQLN3Q9H347 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
UBQLN3Q9H347 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.73□□□□□ -2.13
UBQLN3Q9H347 MTND4P12-201ENST00000498999 1377 ntBASIC1.72□□□□□ -2.13
UBQLN3Q9H347 RNU6-862P-201ENST00000362804 105 ntBASIC1.72□□□□□ -2.13
UBQLN3Q9H347 RNY1P16-201ENST00000363063 111 ntBASIC1.72□□□□□ -2.13
UBQLN3Q9H347 Y_RNA.404-201ENST00000383978 102 ntBASIC1.72□□□□□ -2.13
UBQLN3Q9H347 MIR583-201ENST00000384846 75 ntBASIC1.72□□□□□ -2.13
UBQLN3Q9H347 MIR764-201ENST00000390811 85 ntBASIC1.72□□□□□ -2.13
UBQLN3Q9H347 RNU6-700P-201ENST00000391043 107 ntBASIC1.72□□□□□ -2.13
UBQLN3Q9H347 SNORA75.4-201ENST00000391278 119 ntBASIC1.72□□□□□ -2.13
UBQLN3Q9H347 RNU6-57P-201ENST00000411348 103 ntBASIC1.72□□□□□ -2.13
UBQLN3Q9H347 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.72□□□□□ -2.13
UBQLN3Q9H347 NCOR1P3-201ENST00000420479 303 ntBASIC1.72□□□□□ -2.13
UBQLN3Q9H347 MTND3P23-201ENST00000431980 347 ntBASIC1.72□□□□□ -2.13
UBQLN3Q9H347 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.72□□□□□ -2.13
UBQLN3Q9H347 Y_RNA.635-201ENST00000459041 101 ntBASIC1.72□□□□□ -2.13
UBQLN3Q9H347 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.72□□□□□ -2.13
UBQLN3Q9H347 HMGN1P12-201ENST00000499125 195 ntBASIC1.72□□□□□ -2.13
UBQLN3Q9H347 RNU2-34P-201ENST00000516534 121 ntBASIC1.72□□□□□ -2.13
UBQLN3Q9H347 Y_RNA.691-201ENST00000516611 103 ntBASIC1.72□□□□□ -2.13
UBQLN3Q9H347 SNORA20.3-201ENST00000516880 132 ntBASIC1.72□□□□□ -2.13
UBQLN3Q9H347 RNU6-1213P-201ENST00000517075 94 ntBASIC1.72□□□□□ -2.13
UBQLN3Q9H347 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.72□□□□□ -2.13
UBQLN3Q9H347 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.72□□□□□ -2.13
UBQLN3Q9H347 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.72□□□□□ -2.13
UBQLN3Q9H347 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.72□□□□□ -2.13
UBQLN3Q9H347 AC006001.4-201ENST00000622243 395 ntBASIC1.72□□□□□ -2.13
UBQLN3Q9H347 RNU6-222P-201ENST00000362438 107 ntBASIC1.71□□□□□ -2.14
UBQLN3Q9H347 RNU1-62P-201ENST00000362599 164 ntBASIC1.71□□□□□ -2.14
UBQLN3Q9H347 Y_RNA.106-201ENST00000363189 100 ntBASIC1.71□□□□□ -2.14
UBQLN3Q9H347 SNORD87-201ENST00000364849 89 ntBASIC1.71□□□□□ -2.14
UBQLN3Q9H347 RNU6-1235P-201ENST00000384559 107 ntBASIC1.71□□□□□ -2.14
UBQLN3Q9H347 RNU2-20P-201ENST00000410425 191 ntBASIC1.71□□□□□ -2.14
UBQLN3Q9H347 RNU4-14P-201ENST00000410858 122 ntBASIC1.71□□□□□ -2.14
UBQLN3Q9H347 AC060773.1-201ENST00000421698 310 ntBASIC1.71□□□□□ -2.14
UBQLN3Q9H347 USP9YP16-201ENST00000430287 407 ntBASIC1.71□□□□□ -2.14
UBQLN3Q9H347 AL591806.2-201ENST00000433122 173 ntBASIC1.71□□□□□ -2.14
UBQLN3Q9H347 USP9YP23-201ENST00000455085 407 ntBASIC1.71□□□□□ -2.14
UBQLN3Q9H347 RNU7-87P-201ENST00000459343 62 ntBASIC1.71□□□□□ -2.14
UBQLN3Q9H347 RNU6-498P-201ENST00000459468 107 ntBASIC1.71□□□□□ -2.14
UBQLN3Q9H347 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.71□□□□□ -2.14
UBQLN3Q9H347 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
UBQLN3Q9H347 AC011406.1-201ENST00000512440 370 ntBASIC1.71□□□□□ -2.14
UBQLN3Q9H347 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.71□□□□□ -2.14
UBQLN3Q9H347 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.71□□□□□ -2.14
UBQLN3Q9H347 SNORA44.1-201ENST00000517031 108 ntBASIC1.71□□□□□ -2.14
UBQLN3Q9H347 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.71□□□□□ -2.14
UBQLN3Q9H347 DEFB122-202ENST00000569013 197 ntBASIC1.71□□□□□ -2.14
UBQLN3Q9H347 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.71□□□□□ -2.14
UBQLN3Q9H347 AC016727.1-205ENST00000605437 569 ntBASIC1.71□□□□□ -2.14
UBQLN3Q9H347 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
UBQLN3Q9H347 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
UBQLN3Q9H347 RNU5F-3P-201ENST00000363767 117 ntBASIC1.7□□□□□ -2.14
UBQLN3Q9H347 Y_RNA.179-201ENST00000363844 90 ntBASIC1.7□□□□□ -2.14
UBQLN3Q9H347 RNU1-96P-201ENST00000364163 162 ntBASIC1.7□□□□□ -2.14
UBQLN3Q9H347 RNU6-1283P-201ENST00000365314 105 ntBASIC1.7□□□□□ -2.14
UBQLN3Q9H347 RNU6-793P-201ENST00000384233 104 ntBASIC1.7□□□□□ -2.14
UBQLN3Q9H347 SNORA67.2-201ENST00000384300 149 ntBASIC1.7□□□□□ -2.14
UBQLN3Q9H347 MIR10B-201ENST00000385011 110 ntBASIC1.7□□□□□ -2.14
UBQLN3Q9H347 RNA5SP100-201ENST00000410903 110 ntBASIC1.7□□□□□ -2.14
UBQLN3Q9H347 RNA5SP59-201ENST00000410922 110 ntBASIC1.7□□□□□ -2.14
UBQLN3Q9H347 MTND5P16-201ENST00000460269 1703 ntBASIC1.7□□□□□ -2.14
UBQLN3Q9H347 AC091179.3-201ENST00000474761 144 ntBASIC1.7□□□□□ -2.14
UBQLN3Q9H347 AC107393.1-201ENST00000512403 346 ntBASIC1.7□□□□□ -2.14
UBQLN3Q9H347 SCARNA16.2-201ENST00000516520 172 ntBASIC1.7□□□□□ -2.14
UBQLN3Q9H347 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.7□□□□□ -2.14
UBQLN3Q9H347 MIR3122-201ENST00000577243 73 ntBASIC1.7□□□□□ -2.14
UBQLN3Q9H347 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.7□□□□□ -2.14
UBQLN3Q9H347 AL355073.2-201ENST00000612106 557 ntBASIC1.7□□□□□ -2.14
UBQLN3Q9H347 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.7□□□□□ -2.14
UBQLN3Q9H347 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.7□□□□□ -2.14
UBQLN3Q9H347 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.7□□□□□ -2.14
UBQLN3Q9H347 AL359757.2-201ENST00000624309 274 ntBASIC1.7□□□□□ -2.14
UBQLN3Q9H347 AC068205.3-201ENST00000636385 468 ntBASIC1.7□□□□□ -2.14
UBQLN3Q9H347 AL669831.3-213ENST00000636676 183 ntBASIC1.7□□□□□ -2.14
UBQLN3Q9H347 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.7□□□□□ -2.14
UBQLN3Q9H347 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
UBQLN3Q9H347 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
UBQLN3Q9H347 SNORA16.1-201ENST00000364597 132 ntBASIC1.69□□□□□ -2.14
UBQLN3Q9H347 Y_RNA.415-201ENST00000384012 112 ntBASIC1.69□□□□□ -2.14
UBQLN3Q9H347 MIR9-3-201ENST00000385084 90 ntBASIC1.69□□□□□ -2.14
UBQLN3Q9H347 MIR190B-201ENST00000401119 79 ntBASIC1.69□□□□□ -2.14
UBQLN3Q9H347 RNA5SP504-201ENST00000410676 117 ntBASIC1.69□□□□□ -2.14
UBQLN3Q9H347 RNU6-370P-201ENST00000411008 104 ntBASIC1.69□□□□□ -2.14
UBQLN3Q9H347 RNU6-1304P-201ENST00000411374 106 ntBASIC1.69□□□□□ -2.14
UBQLN3Q9H347 AL445685.2-201ENST00000422551 342 ntBASIC1.69□□□□□ -2.14
UBQLN3Q9H347 AC099677.2-201ENST00000436385 175 ntBASIC1.69□□□□□ -2.14
UBQLN3Q9H347 AC003989.2-201ENST00000440224 169 ntBASIC1.69□□□□□ -2.14
UBQLN3Q9H347 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.69□□□□□ -2.14
UBQLN3Q9H347 AC116353.2-201ENST00000505332 712 ntBASIC1.69□□□□□ -2.14
UBQLN3Q9H347 RNU6-1114P-201ENST00000516022 107 ntBASIC1.69□□□□□ -2.14
UBQLN3Q9H347 RNU6-307P-201ENST00000516743 106 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms