Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 AC007969.2-201ENST00000441891 191 ntBASIC3.14□□□□□ -1.91
VPS11Q9H270 AP000705.1-201ENST00000454567 350 ntBASIC3.14□□□□□ -1.91
VPS11Q9H270 RNA5SP170-201ENST00000517150 101 ntBASIC3.14□□□□□ -1.91
VPS11Q9H270 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC3.14□□□□□ -1.91
VPS11Q9H270 AC022616.8-201ENST00000533569 253 ntBASIC3.14□□□□□ -1.91
VPS11Q9H270 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.14□□□□□ -1.91
VPS11Q9H270 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.14□□□□□ -1.91
VPS11Q9H270 MIR5571-201ENST00000577998 113 ntBASIC3.14□□□□□ -1.91
VPS11Q9H270 MIR4431-201ENST00000579990 94 ntBASIC3.14□□□□□ -1.91
VPS11Q9H270 MIR2682-201ENST00000580305 110 ntBASIC3.14□□□□□ -1.91
VPS11Q9H270 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.14□□□□□ -1.91
VPS11Q9H270 AC091932.3-201ENST00000624223 323 ntBASIC3.14□□□□□ -1.91
VPS11Q9H270 MIR7157-201ENST00000635801 60 ntBASIC3.14□□□□□ -1.91
VPS11Q9H270 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
VPS11Q9H270 AC026241.1-201ENST00000517873 2142 ntBASIC3.14□□□□□ -1.91
VPS11Q9H270 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
VPS11Q9H270 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
VPS11Q9H270 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.14□□□□□ -1.91
VPS11Q9H270 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
VPS11Q9H270 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.13□□□□□ -1.91
VPS11Q9H270 RNU6-834P-201ENST00000362367 110 ntBASIC3.13□□□□□ -1.91
VPS11Q9H270 SNORD114-19-201ENST00000363072 75 ntBASIC3.13□□□□□ -1.91
VPS11Q9H270 RNU6-486P-201ENST00000363116 107 ntBASIC3.13□□□□□ -1.91
VPS11Q9H270 snoU2_19.4-201ENST00000364329 80 ntBASIC3.13□□□□□ -1.91
VPS11Q9H270 Y_RNA.563-201ENST00000384707 108 ntBASIC3.13□□□□□ -1.91
VPS11Q9H270 RNU6-1328P-201ENST00000410938 106 ntBASIC3.13□□□□□ -1.91
VPS11Q9H270 AL135790.2-201ENST00000437701 267 ntBASIC3.13□□□□□ -1.91
VPS11Q9H270 Z96811.1-201ENST00000445880 108 ntBASIC3.13□□□□□ -1.91
VPS11Q9H270 snoU13.6-201ENST00000458785 104 ntBASIC3.13□□□□□ -1.91
VPS11Q9H270 RPL21P10-201ENST00000463521 490 ntBASIC3.13□□□□□ -1.91
VPS11Q9H270 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.13□□□□□ -1.91
VPS11Q9H270 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.13□□□□□ -1.91
VPS11Q9H270 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.13□□□□□ -1.91
VPS11Q9H270 DNAJC19P2-201ENST00000593340 302 ntBASIC3.13□□□□□ -1.91
VPS11Q9H270 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.13□□□□□ -1.91
VPS11Q9H270 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
VPS11Q9H270 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
VPS11Q9H270 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
VPS11Q9H270 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
VPS11Q9H270 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
VPS11Q9H270 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
VPS11Q9H270 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
VPS11Q9H270 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
VPS11Q9H270 Y_RNA.172-201ENST00000363765 102 ntBASIC3.12□□□□□ -1.91
VPS11Q9H270 MIR490-201ENST00000384865 128 ntBASIC3.12□□□□□ -1.91
VPS11Q9H270 RNU6-763P-201ENST00000390865 106 ntBASIC3.12□□□□□ -1.91
VPS11Q9H270 MIR887-201ENST00000401258 79 ntBASIC3.12□□□□□ -1.91
VPS11Q9H270 ELOCP21-201ENST00000412558 336 ntBASIC3.12□□□□□ -1.91
VPS11Q9H270 AC097463.2-201ENST00000421074 142 ntBASIC3.12□□□□□ -1.91
VPS11Q9H270 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
VPS11Q9H270 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.12□□□□□ -1.91
VPS11Q9H270 RNU6-625P-201ENST00000459412 107 ntBASIC3.12□□□□□ -1.91
VPS11Q9H270 AL121594.1-201ENST00000475906 575 ntBASIC3.12□□□□□ -1.91
VPS11Q9H270 CYCTP-201ENST00000504253 315 ntBASIC3.12□□□□□ -1.91
VPS11Q9H270 Y_RNA.797-201ENST00000515977 94 ntBASIC3.12□□□□□ -1.91
VPS11Q9H270 AC007536.1-201ENST00000533382 349 ntBASIC3.12□□□□□ -1.91
VPS11Q9H270 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.12□□□□□ -1.91
VPS11Q9H270 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
VPS11Q9H270 AC105137.2-201ENST00000569073 466 ntBASIC3.12□□□□□ -1.91
VPS11Q9H270 AC103810.1-201ENST00000579873 453 ntBASIC3.12□□□□□ -1.91
VPS11Q9H270 AC004467.1-201ENST00000615678 330 ntBASIC3.12□□□□□ -1.91
VPS11Q9H270 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.12□□□□□ -1.91
VPS11Q9H270 AL161912.2-201ENST00000565707 3007 ntBASIC3.12□□□□□ -1.91
VPS11Q9H270 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
VPS11Q9H270 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
VPS11Q9H270 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.11□□□□□ -1.91
VPS11Q9H270 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
VPS11Q9H270 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
VPS11Q9H270 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
VPS11Q9H270 RNY1P11-201ENST00000363759 113 ntBASIC3.11□□□□□ -1.91
VPS11Q9H270 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.11□□□□□ -1.91
VPS11Q9H270 RNU1-140P-201ENST00000365040 165 ntBASIC3.11□□□□□ -1.91
VPS11Q9H270 MIR539-201ENST00000365690 78 ntBASIC3.11□□□□□ -1.91
VPS11Q9H270 MIR627-201ENST00000384979 97 ntBASIC3.11□□□□□ -1.91
VPS11Q9H270 RNU6-578P-201ENST00000390980 103 ntBASIC3.11□□□□□ -1.91
VPS11Q9H270 RNA5SP171-201ENST00000391071 115 ntBASIC3.11□□□□□ -1.91
VPS11Q9H270 MIR513C-201ENST00000401352 84 ntBASIC3.11□□□□□ -1.91
VPS11Q9H270 RNA5SP274-201ENST00000410484 108 ntBASIC3.11□□□□□ -1.91
VPS11Q9H270 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.11□□□□□ -1.91
VPS11Q9H270 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.11□□□□□ -1.91
VPS11Q9H270 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.11□□□□□ -1.91
VPS11Q9H270 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC3.11□□□□□ -1.91
VPS11Q9H270 AC016925.1-201ENST00000458303 298 ntBASIC3.11□□□□□ -1.91
VPS11Q9H270 AC112771.1-201ENST00000463581 102 ntBASIC3.11□□□□□ -1.91
VPS11Q9H270 RPL30P12-201ENST00000474666 353 ntBASIC3.11□□□□□ -1.91
VPS11Q9H270 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.11□□□□□ -1.91
VPS11Q9H270 RNU6-155P-201ENST00000516347 100 ntBASIC3.11□□□□□ -1.91
VPS11Q9H270 CYCSP26-201ENST00000534107 320 ntBASIC3.11□□□□□ -1.91
VPS11Q9H270 AC016256.1-201ENST00000547971 354 ntBASIC3.11□□□□□ -1.91
VPS11Q9H270 AC018448.1-201ENST00000552843 316 ntBASIC3.11□□□□□ -1.91
VPS11Q9H270 AC074050.1-201ENST00000563247 211 ntBASIC3.11□□□□□ -1.91
VPS11Q9H270 MIR3613-201ENST00000579844 87 ntBASIC3.11□□□□□ -1.91
VPS11Q9H270 MIR3616-201ENST00000584070 92 ntBASIC3.11□□□□□ -1.91
VPS11Q9H270 AC010999.1-201ENST00000611856 324 ntBASIC3.11□□□□□ -1.91
VPS11Q9H270 Y_RNA.802-201ENST00000614892 130 ntBASIC3.11□□□□□ -1.91
VPS11Q9H270 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.11□□□□□ -1.91
VPS11Q9H270 RNU6-461P-201ENST00000364195 107 ntBASIC3.1□□□□□ -1.91
VPS11Q9H270 RNU4-10P-201ENST00000364383 140 ntBASIC3.1□□□□□ -1.91
VPS11Q9H270 SNORA72.2-201ENST00000365028 127 ntBASIC3.1□□□□□ -1.91
VPS11Q9H270 RNU6-1056P-201ENST00000383996 107 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms