Protein–RNA interactions for Protein: Q9H204

MED28, Mediator of RNA polymerase II transcription subunit 28, humanhuman

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MED28Q9H204 MIR6835-201ENST00000621552 64 ntBASIC0.47□□□□□ -2.33
MED28Q9H204 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.47□□□□□ -2.33
MED28Q9H204 OR5AK4P-201ENST00000635912 903 ntBASIC0.47□□□□□ -2.33
MED28Q9H204 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
MED28Q9H204 AL442644.1-201ENST00000454390 3105 ntBASIC0.46□□□□□ -2.34
MED28Q9H204 RNU4-21P-201ENST00000362802 126 ntBASIC0.46□□□□□ -2.34
MED28Q9H204 RNU4-12P-201ENST00000365233 139 ntBASIC0.46□□□□□ -2.34
MED28Q9H204 SNORA2.2-201ENST00000365473 135 ntBASIC0.46□□□□□ -2.34
MED28Q9H204 RNU6-110P-201ENST00000384508 104 ntBASIC0.46□□□□□ -2.34
MED28Q9H204 MIR487A-201ENST00000385009 80 ntBASIC0.46□□□□□ -2.34
MED28Q9H204 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
MED28Q9H204 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.46□□□□□ -2.34
MED28Q9H204 RNU6-321P-201ENST00000410912 106 ntBASIC0.46□□□□□ -2.34
MED28Q9H204 MTCYBP8-201ENST00000422855 651 ntBASIC0.46□□□□□ -2.34
MED28Q9H204 AL035398.1-201ENST00000430869 322 ntBASIC0.46□□□□□ -2.34
MED28Q9H204 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.46□□□□□ -2.34
MED28Q9H204 STAG3L5P-204ENST00000443759 179 ntBASIC0.46□□□□□ -2.34
MED28Q9H204 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.46□□□□□ -2.34
MED28Q9H204 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.46□□□□□ -2.34
MED28Q9H204 RPL39P39-201ENST00000455840 151 ntBASIC0.46□□□□□ -2.34
MED28Q9H204 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC0.46□□□□□ -2.34
MED28Q9H204 RNU6-759P-201ENST00000516740 103 ntBASIC0.46□□□□□ -2.34
MED28Q9H204 RNA5SP454-201ENST00000517231 127 ntBASIC0.46□□□□□ -2.34
MED28Q9H204 AC007834.2-201ENST00000536310 343 ntBASIC0.46□□□□□ -2.34
MED28Q9H204 SCOCP1-201ENST00000554676 349 ntBASIC0.46□□□□□ -2.34
MED28Q9H204 MIR4769-201ENST00000584126 77 ntBASIC0.46□□□□□ -2.34
MED28Q9H204 AL357312.1-201ENST00000603879 298 ntBASIC0.46□□□□□ -2.34
MED28Q9H204 BNIP3P10-201ENST00000605360 577 ntBASIC0.46□□□□□ -2.34
MED28Q9H204 AC016727.1-205ENST00000605437 569 ntBASIC0.46□□□□□ -2.34
MED28Q9H204 AC008536.2-201ENST00000607284 349 ntBASIC0.46□□□□□ -2.34
MED28Q9H204 uc_338.34-201ENST00000617467 174 ntBASIC0.46□□□□□ -2.34
MED28Q9H204 AF246928.1-201ENST00000623768 87 ntBASIC0.46□□□□□ -2.34
MED28Q9H204 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.46□□□□□ -2.34
MED28Q9H204 AC023934.1-201ENST00000574529 2389 ntBASIC0.45□□□□□ -2.34
MED28Q9H204 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
MED28Q9H204 MIR373-201ENST00000362273 69 ntBASIC0.45□□□□□ -2.34
MED28Q9H204 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
MED28Q9H204 SNORA75.2-201ENST00000391138 150 ntBASIC0.45□□□□□ -2.34
MED28Q9H204 SNORA75.3-201ENST00000391231 150 ntBASIC0.45□□□□□ -2.34
MED28Q9H204 MIR450B-201ENST00000401182 78 ntBASIC0.45□□□□□ -2.34
MED28Q9H204 MTATP6P19-201ENST00000413797 659 ntBASIC0.45□□□□□ -2.34
MED28Q9H204 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.45□□□□□ -2.34
MED28Q9H204 MTCO2P11-201ENST00000431069 680 ntBASIC0.45□□□□□ -2.34
MED28Q9H204 AL445305.1-201ENST00000432577 575 ntBASIC0.45□□□□□ -2.34
MED28Q9H204 RPEP5-201ENST00000441137 268 ntBASIC0.45□□□□□ -2.34
MED28Q9H204 AC244505.5-201ENST00000443639 207 ntBASIC0.45□□□□□ -2.34
MED28Q9H204 RNU7-90P-201ENST00000459216 62 ntBASIC0.45□□□□□ -2.34
MED28Q9H204 RNU7-94P-201ENST00000459576 63 ntBASIC0.45□□□□□ -2.34
MED28Q9H204 HMGN1P7-201ENST00000491722 313 ntBASIC0.45□□□□□ -2.34
MED28Q9H204 MTND1P22-201ENST00000510572 951 ntBASIC0.45□□□□□ -2.34
MED28Q9H204 TRMT112P2-201ENST00000512910 132 ntBASIC0.45□□□□□ -2.34
MED28Q9H204 AC108729.3-201ENST00000513484 108 ntBASIC0.45□□□□□ -2.34
MED28Q9H204 MTND4P7-201ENST00000523876 130 ntBASIC0.45□□□□□ -2.34
MED28Q9H204 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.45□□□□□ -2.34
MED28Q9H204 MDM2-233ENST00000545204 398 ntTSL 5 BASIC0.45□□□□□ -2.34
MED28Q9H204 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.45□□□□□ -2.34
MED28Q9H204 AC009094.1-201ENST00000564443 426 ntBASIC0.45□□□□□ -2.34
MED28Q9H204 FRG2DP-202ENST00000566967 323 ntBASIC0.45□□□□□ -2.34
MED28Q9H204 SNORA28-201ENST00000606769 126 ntBASIC0.45□□□□□ -2.34
MED28Q9H204 SNORD11B-201ENST00000607707 90 ntBASIC0.45□□□□□ -2.34
MED28Q9H204 AC122133.1-201ENST00000613964 233 ntBASIC0.45□□□□□ -2.34
MED28Q9H204 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.45□□□□□ -2.34
MED28Q9H204 AC137590.2-201ENST00000619709 240 ntBASIC0.45□□□□□ -2.34
MED28Q9H204 FER-210ENST00000628534 558 ntTSL 5 BASIC0.45□□□□□ -2.34
MED28Q9H204 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
MED28Q9H204 CASC19-280ENST00000642102 1351 ntBASIC0.45□□□□□ -2.34
MED28Q9H204 RNU6-1329P-201ENST00000365664 107 ntBASIC0.44□□□□□ -2.34
MED28Q9H204 MIR1185-2-201ENST00000408687 86 ntBASIC0.44□□□□□ -2.34
MED28Q9H204 MTATP6P18-201ENST00000417994 673 ntBASIC0.44□□□□□ -2.34
MED28Q9H204 CALM2P4-201ENST00000430810 426 ntBASIC0.44□□□□□ -2.34
MED28Q9H204 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.44□□□□□ -2.34
MED28Q9H204 TPT1P7-201ENST00000458300 517 ntBASIC0.44□□□□□ -2.34
MED28Q9H204 AC022493.2-201ENST00000506122 481 ntBASIC0.44□□□□□ -2.34
MED28Q9H204 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC0.44□□□□□ -2.34
MED28Q9H204 MTND1P5-201ENST00000517906 940 ntBASIC0.44□□□□□ -2.34
MED28Q9H204 AC087854.1-201ENST00000519706 414 ntBASIC0.44□□□□□ -2.34
MED28Q9H204 AC104576.1-201ENST00000524225 88 ntBASIC0.44□□□□□ -2.34
MED28Q9H204 MTND1P35-201ENST00000526739 508 ntBASIC0.44□□□□□ -2.34
MED28Q9H204 AP002001.1-203ENST00000534002 267 ntBASIC0.44□□□□□ -2.34
MED28Q9H204 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.44□□□□□ -2.34
MED28Q9H204 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.44□□□□□ -2.34
MED28Q9H204 MIR4298-201ENST00000584380 73 ntBASIC0.44□□□□□ -2.34
MED28Q9H204 AL390237.1-201ENST00000404226 1415 ntBASIC0.44□□□□□ -2.34
MED28Q9H204 FGF7P2-201ENST00000332473 296 ntBASIC0.43□□□□□ -2.34
MED28Q9H204 RNU6-424P-201ENST00000384367 105 ntBASIC0.43□□□□□ -2.34
MED28Q9H204 SNORD116-13-201ENST00000384408 92 ntBASIC0.43□□□□□ -2.34
MED28Q9H204 AL049545.1-201ENST00000401856 572 ntBASIC0.43□□□□□ -2.34
MED28Q9H204 Y_RNA.595-201ENST00000410403 105 ntBASIC0.43□□□□□ -2.34
MED28Q9H204 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.43□□□□□ -2.34
MED28Q9H204 FABP5P4-201ENST00000437203 171 ntBASIC0.43□□□□□ -2.34
MED28Q9H204 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.43□□□□□ -2.34
MED28Q9H204 AC073415.1-201ENST00000449240 153 ntBASIC0.43□□□□□ -2.34
MED28Q9H204 AL049830.1-201ENST00000468034 425 ntBASIC0.43□□□□□ -2.34
MED28Q9H204 RPL23AP75-201ENST00000491601 451 ntBASIC0.43□□□□□ -2.34
MED28Q9H204 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC0.43□□□□□ -2.34
MED28Q9H204 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.43□□□□□ -2.34
MED28Q9H204 MIR4781-201ENST00000585250 76 ntBASIC0.43□□□□□ -2.34
MED28Q9H204 MIR4424-201ENST00000585257 86 ntBASIC0.43□□□□□ -2.34
MED28Q9H204 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.43□□□□□ -2.34
MED28Q9H204 RNU6-996P-201ENST00000365438 107 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 126.6 ms