Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 AC011602.1-201ENST00000546484 331 ntBASIC4□□□□□ -1.77
NUCKS1Q9H1E3 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4□□□□□ -1.77
NUCKS1Q9H1E3 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4□□□□□ -1.77
NUCKS1Q9H1E3 AC034105.4-201ENST00000568304 277 ntBASIC4□□□□□ -1.77
NUCKS1Q9H1E3 AC087499.8-201ENST00000578406 226 ntBASIC4□□□□□ -1.77
NUCKS1Q9H1E3 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4□□□□□ -1.77
NUCKS1Q9H1E3 AC069200.1-201ENST00000609511 323 ntBASIC4□□□□□ -1.77
NUCKS1Q9H1E3 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC4□□□□□ -1.77
NUCKS1Q9H1E3 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4□□□□□ -1.77
NUCKS1Q9H1E3 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4□□□□□ -1.77
NUCKS1Q9H1E3 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
NUCKS1Q9H1E3 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.99□□□□□ -1.77
NUCKS1Q9H1E3 PWAR6-201ENST00000552334 4618 ntBASIC3.99□□□□□ -1.77
NUCKS1Q9H1E3 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
NUCKS1Q9H1E3 SNORA31-201ENST00000362607 130 ntBASIC3.99□□□□□ -1.77
NUCKS1Q9H1E3 RNU6-1010P-201ENST00000362757 107 ntBASIC3.99□□□□□ -1.77
NUCKS1Q9H1E3 RNU6-674P-201ENST00000363831 107 ntBASIC3.99□□□□□ -1.77
NUCKS1Q9H1E3 DYNLT3P1-201ENST00000378574 347 ntBASIC3.99□□□□□ -1.77
NUCKS1Q9H1E3 SNORA72-201ENST00000384339 132 ntBASIC3.99□□□□□ -1.77
NUCKS1Q9H1E3 MIR184-201ENST00000384962 84 ntBASIC3.99□□□□□ -1.77
NUCKS1Q9H1E3 AP000567.1-201ENST00000406413 156 ntBASIC3.99□□□□□ -1.77
NUCKS1Q9H1E3 RN7SKP202-201ENST00000410439 330 ntBASIC3.99□□□□□ -1.77
NUCKS1Q9H1E3 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.99□□□□□ -1.77
NUCKS1Q9H1E3 NDUFB1P1-201ENST00000435191 180 ntBASIC3.99□□□□□ -1.77
NUCKS1Q9H1E3 AL121890.1-201ENST00000435457 205 ntBASIC3.99□□□□□ -1.77
NUCKS1Q9H1E3 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.99□□□□□ -1.77
NUCKS1Q9H1E3 RN7SL542P-201ENST00000467147 294 ntBASIC3.99□□□□□ -1.77
NUCKS1Q9H1E3 AC006445.2-201ENST00000510061 472 ntBASIC3.99□□□□□ -1.77
NUCKS1Q9H1E3 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.99□□□□□ -1.77
NUCKS1Q9H1E3 RNU7-116P-201ENST00000516940 62 ntBASIC3.99□□□□□ -1.77
NUCKS1Q9H1E3 RNU1-45P-201ENST00000517191 141 ntBASIC3.99□□□□□ -1.77
NUCKS1Q9H1E3 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.99□□□□□ -1.77
NUCKS1Q9H1E3 CYCSP30-201ENST00000546447 172 ntBASIC3.99□□□□□ -1.77
NUCKS1Q9H1E3 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.99□□□□□ -1.77
NUCKS1Q9H1E3 AL049861.1-201ENST00000603130 150 ntBASIC3.99□□□□□ -1.77
NUCKS1Q9H1E3 RMST_8.1-201ENST00000610287 165 ntBASIC3.99□□□□□ -1.77
NUCKS1Q9H1E3 AC007256.1-201ENST00000392253 2765 ntBASIC3.98□□□□□ -1.77
NUCKS1Q9H1E3 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
NUCKS1Q9H1E3 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
NUCKS1Q9H1E3 RNU6-1305P-201ENST00000364353 104 ntBASIC3.98□□□□□ -1.77
NUCKS1Q9H1E3 MIR1185-2-201ENST00000408687 86 ntBASIC3.98□□□□□ -1.77
NUCKS1Q9H1E3 SNORA11-201ENST00000408789 128 ntBASIC3.98□□□□□ -1.77
NUCKS1Q9H1E3 AL135786.1-201ENST00000415892 214 ntBASIC3.98□□□□□ -1.77
NUCKS1Q9H1E3 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.98□□□□□ -1.77
NUCKS1Q9H1E3 RPL36AP21-201ENST00000490372 323 ntBASIC3.98□□□□□ -1.77
NUCKS1Q9H1E3 AC078918.1-201ENST00000498515 228 ntBASIC3.98□□□□□ -1.77
NUCKS1Q9H1E3 RNU6-579P-201ENST00000516879 102 ntBASIC3.98□□□□□ -1.77
NUCKS1Q9H1E3 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.98□□□□□ -1.77
NUCKS1Q9H1E3 AC023632.4-201ENST00000517783 191 ntBASIC3.98□□□□□ -1.77
NUCKS1Q9H1E3 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.98□□□□□ -1.77
NUCKS1Q9H1E3 AC018630.3-201ENST00000542637 96 ntBASIC3.98□□□□□ -1.77
NUCKS1Q9H1E3 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.98□□□□□ -1.77
NUCKS1Q9H1E3 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.98□□□□□ -1.77
NUCKS1Q9H1E3 HMGN2P15-201ENST00000585707 270 ntBASIC3.98□□□□□ -1.77
NUCKS1Q9H1E3 AC005972.2-201ENST00000604690 348 ntBASIC3.98□□□□□ -1.77
NUCKS1Q9H1E3 AC093732.2-201ENST00000607950 274 ntBASIC3.98□□□□□ -1.77
NUCKS1Q9H1E3 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
NUCKS1Q9H1E3 AP000553.6-201ENST00000641242 118 ntBASIC3.98□□□□□ -1.77
NUCKS1Q9H1E3 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.98□□□□□ -1.77
NUCKS1Q9H1E3 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
NUCKS1Q9H1E3 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
NUCKS1Q9H1E3 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
NUCKS1Q9H1E3 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
NUCKS1Q9H1E3 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
NUCKS1Q9H1E3 AL159152.1-201ENST00000635019 2587 ntBASIC3.97□□□□□ -1.77
NUCKS1Q9H1E3 RNA5SP295-201ENST00000362655 121 ntBASIC3.97□□□□□ -1.77
NUCKS1Q9H1E3 Y_RNA.281-201ENST00000364774 94 ntBASIC3.97□□□□□ -1.77
NUCKS1Q9H1E3 RNA5SP189-201ENST00000364920 115 ntBASIC3.97□□□□□ -1.77
NUCKS1Q9H1E3 MIR586-201ENST00000385035 97 ntBASIC3.97□□□□□ -1.77
NUCKS1Q9H1E3 SNORD72-201ENST00000390994 80 ntBASIC3.97□□□□□ -1.77
NUCKS1Q9H1E3 RN7SKP156-201ENST00000410308 342 ntBASIC3.97□□□□□ -1.77
NUCKS1Q9H1E3 RPS3P1-201ENST00000456781 192 ntBASIC3.97□□□□□ -1.77
NUCKS1Q9H1E3 AC092185.1-201ENST00000491371 97 ntBASIC3.97□□□□□ -1.77
NUCKS1Q9H1E3 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.97□□□□□ -1.77
NUCKS1Q9H1E3 RNU6-412P-201ENST00000516434 106 ntBASIC3.97□□□□□ -1.77
NUCKS1Q9H1E3 RNU6-762P-201ENST00000517107 102 ntBASIC3.97□□□□□ -1.77
NUCKS1Q9H1E3 AC008011.1-201ENST00000545989 227 ntBASIC3.97□□□□□ -1.77
NUCKS1Q9H1E3 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.97□□□□□ -1.77
NUCKS1Q9H1E3 AC091152.3-201ENST00000604227 325 ntBASIC3.97□□□□□ -1.77
NUCKS1Q9H1E3 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
NUCKS1Q9H1E3 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
NUCKS1Q9H1E3 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
NUCKS1Q9H1E3 RNA5SP42-201ENST00000364278 115 ntBASIC3.96□□□□□ -1.78
NUCKS1Q9H1E3 RNU6-1107P-201ENST00000364817 104 ntBASIC3.96□□□□□ -1.78
NUCKS1Q9H1E3 RNU6-1131P-201ENST00000364955 107 ntBASIC3.96□□□□□ -1.78
NUCKS1Q9H1E3 RNU6-748P-201ENST00000384648 107 ntBASIC3.96□□□□□ -1.78
NUCKS1Q9H1E3 MIR554-201ENST00000384874 96 ntBASIC3.96□□□□□ -1.78
NUCKS1Q9H1E3 TRIAP1P1-201ENST00000427062 225 ntBASIC3.96□□□□□ -1.78
NUCKS1Q9H1E3 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.96□□□□□ -1.78
NUCKS1Q9H1E3 RNA5SP153-201ENST00000516498 76 ntBASIC3.96□□□□□ -1.78
NUCKS1Q9H1E3 HSPE1P18-201ENST00000517602 280 ntBASIC3.96□□□□□ -1.78
NUCKS1Q9H1E3 IGKV1-22-201ENST00000524313 326 ntBASIC3.96□□□□□ -1.78
NUCKS1Q9H1E3 MIR4425-201ENST00000580572 84 ntBASIC3.96□□□□□ -1.78
NUCKS1Q9H1E3 AL022345.2-201ENST00000606307 135 ntBASIC3.96□□□□□ -1.78
NUCKS1Q9H1E3 RNU6-91P-201ENST00000607774 107 ntBASIC3.96□□□□□ -1.78
NUCKS1Q9H1E3 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
NUCKS1Q9H1E3 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.96□□□□□ -1.78
NUCKS1Q9H1E3 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.95□□□□□ -1.78
NUCKS1Q9H1E3 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
NUCKS1Q9H1E3 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 273.6 ms