Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 SNORA26.7-201ENST00000391288 122 ntBASIC2.68□□□□□ -1.98
AMBRA1Q9C0C7 U6atac.2-201ENST00000408644 118 ntBASIC2.68□□□□□ -1.98
AMBRA1Q9C0C7 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.68□□□□□ -1.98
AMBRA1Q9C0C7 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.68□□□□□ -1.98
AMBRA1Q9C0C7 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.68□□□□□ -1.98
AMBRA1Q9C0C7 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.68□□□□□ -1.98
AMBRA1Q9C0C7 MIR3945-201ENST00000581853 98 ntBASIC2.68□□□□□ -1.98
AMBRA1Q9C0C7 AC037487.3-201ENST00000606668 112 ntBASIC2.68□□□□□ -1.98
AMBRA1Q9C0C7 AC068205.3-201ENST00000636385 468 ntBASIC2.68□□□□□ -1.98
AMBRA1Q9C0C7 MIR3674-201ENST00000636576 68 ntBASIC2.68□□□□□ -1.98
AMBRA1Q9C0C7 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.68□□□□□ -1.98
AMBRA1Q9C0C7 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
AMBRA1Q9C0C7 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
AMBRA1Q9C0C7 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
AMBRA1Q9C0C7 RNU6-1266P-201ENST00000362794 105 ntBASIC2.67□□□□□ -1.98
AMBRA1Q9C0C7 Y_RNA.101-201ENST00000363154 102 ntBASIC2.67□□□□□ -1.98
AMBRA1Q9C0C7 MIR218-1-201ENST00000384999 110 ntBASIC2.67□□□□□ -1.98
AMBRA1Q9C0C7 SNORD58.1-201ENST00000391313 66 ntBASIC2.67□□□□□ -1.98
AMBRA1Q9C0C7 MIR1294-201ENST00000408503 142 ntBASIC2.67□□□□□ -1.98
AMBRA1Q9C0C7 RPL23AP58-201ENST00000440453 469 ntBASIC2.67□□□□□ -1.98
AMBRA1Q9C0C7 AC005042.3-201ENST00000453230 174 ntBASIC2.67□□□□□ -1.98
AMBRA1Q9C0C7 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.67□□□□□ -1.98
AMBRA1Q9C0C7 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.67□□□□□ -1.98
AMBRA1Q9C0C7 RNU6-107P-201ENST00000516643 102 ntBASIC2.67□□□□□ -1.98
AMBRA1Q9C0C7 AL442067.1-201ENST00000613261 223 ntBASIC2.67□□□□□ -1.98
AMBRA1Q9C0C7 AL590240.4-201ENST00000616908 390 ntBASIC2.67□□□□□ -1.98
AMBRA1Q9C0C7 MIR7157-201ENST00000635801 60 ntBASIC2.67□□□□□ -1.98
AMBRA1Q9C0C7 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
AMBRA1Q9C0C7 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.66□□□□□ -1.98
AMBRA1Q9C0C7 MIR410-201ENST00000362222 80 ntBASIC2.66□□□□□ -1.98
AMBRA1Q9C0C7 Y_RNA.65-201ENST00000362846 100 ntBASIC2.66□□□□□ -1.98
AMBRA1Q9C0C7 SNORA71.1-201ENST00000364523 117 ntBASIC2.66□□□□□ -1.98
AMBRA1Q9C0C7 SNORD87-201ENST00000364849 89 ntBASIC2.66□□□□□ -1.98
AMBRA1Q9C0C7 Y_RNA.446-201ENST00000384178 104 ntBASIC2.66□□□□□ -1.98
AMBRA1Q9C0C7 SNORA67.2-201ENST00000384300 149 ntBASIC2.66□□□□□ -1.98
AMBRA1Q9C0C7 MIR512-1-201ENST00000384913 84 ntBASIC2.66□□□□□ -1.98
AMBRA1Q9C0C7 RPL19P1-201ENST00000411635 428 ntBASIC2.66□□□□□ -1.98
AMBRA1Q9C0C7 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.66□□□□□ -1.98
AMBRA1Q9C0C7 RPL30P4-201ENST00000429309 333 ntBASIC2.66□□□□□ -1.98
AMBRA1Q9C0C7 POLR2KP2-201ENST00000438155 177 ntBASIC2.66□□□□□ -1.98
AMBRA1Q9C0C7 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.66□□□□□ -1.98
AMBRA1Q9C0C7 Z98949.2-201ENST00000440996 144 ntBASIC2.66□□□□□ -1.98
AMBRA1Q9C0C7 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.66□□□□□ -1.98
AMBRA1Q9C0C7 RPS27AP9-201ENST00000477681 438 ntBASIC2.66□□□□□ -1.98
AMBRA1Q9C0C7 RNU1-117P-201ENST00000517041 158 ntBASIC2.66□□□□□ -1.98
AMBRA1Q9C0C7 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.66□□□□□ -1.98
AMBRA1Q9C0C7 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.66□□□□□ -1.98
AMBRA1Q9C0C7 MIR3162-201ENST00000581818 82 ntBASIC2.66□□□□□ -1.98
AMBRA1Q9C0C7 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.66□□□□□ -1.98
AMBRA1Q9C0C7 AC091932.3-201ENST00000624223 323 ntBASIC2.66□□□□□ -1.98
AMBRA1Q9C0C7 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
AMBRA1Q9C0C7 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
AMBRA1Q9C0C7 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.66□□□□□ -1.98
AMBRA1Q9C0C7 AC092593.1-201ENST00000515413 1815 ntBASIC2.65□□□□□ -1.98
AMBRA1Q9C0C7 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.65□□□□□ -1.98
AMBRA1Q9C0C7 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.65□□□□□ -1.98
AMBRA1Q9C0C7 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.65□□□□□ -1.98
AMBRA1Q9C0C7 SNORA9.2-201ENST00000365361 133 ntBASIC2.65□□□□□ -1.99
AMBRA1Q9C0C7 Y_RNA.383-201ENST00000383855 97 ntBASIC2.65□□□□□ -1.99
AMBRA1Q9C0C7 RNU6-1264P-201ENST00000383891 107 ntBASIC2.65□□□□□ -1.99
AMBRA1Q9C0C7 SNORD21-201ENST00000383953 95 ntBASIC2.65□□□□□ -1.99
AMBRA1Q9C0C7 AC104332.2-201ENST00000429959 156 ntBASIC2.65□□□□□ -1.99
AMBRA1Q9C0C7 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.65□□□□□ -1.99
AMBRA1Q9C0C7 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.65□□□□□ -1.99
AMBRA1Q9C0C7 RNU6-586P-201ENST00000517265 104 ntBASIC2.65□□□□□ -1.99
AMBRA1Q9C0C7 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.65□□□□□ -1.99
AMBRA1Q9C0C7 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.65□□□□□ -1.99
AMBRA1Q9C0C7 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.65□□□□□ -1.99
AMBRA1Q9C0C7 AC010620.2-201ENST00000600135 313 ntBASIC2.65□□□□□ -1.99
AMBRA1Q9C0C7 AL713866.2-201ENST00000603579 219 ntBASIC2.65□□□□□ -1.99
AMBRA1Q9C0C7 IGHVIII-44-202ENST00000636235 289 ntBASIC2.65□□□□□ -1.99
AMBRA1Q9C0C7 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.65□□□□□ -1.99
AMBRA1Q9C0C7 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.65□□□□□ -1.99
AMBRA1Q9C0C7 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC2.65□□□□□ -1.99
AMBRA1Q9C0C7 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.65□□□□□ -1.99
AMBRA1Q9C0C7 AL136360.1-201ENST00000503377 1900 ntBASIC2.65□□□□□ -1.99
AMBRA1Q9C0C7 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.65□□□□□ -1.99
AMBRA1Q9C0C7 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
AMBRA1Q9C0C7 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
AMBRA1Q9C0C7 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.64□□□□□ -1.99
AMBRA1Q9C0C7 AC096644.4-201ENST00000563417 2912 ntBASIC2.64□□□□□ -1.99
AMBRA1Q9C0C7 Y_RNA.44-201ENST00000362676 108 ntBASIC2.64□□□□□ -1.99
AMBRA1Q9C0C7 RNU1-72P-201ENST00000362976 153 ntBASIC2.64□□□□□ -1.99
AMBRA1Q9C0C7 MT-TR-201ENST00000387439 65 ntBASIC2.64□□□□□ -1.99
AMBRA1Q9C0C7 RNU2-54P-201ENST00000410299 190 ntBASIC2.64□□□□□ -1.99
AMBRA1Q9C0C7 RNA5SP504-201ENST00000410676 117 ntBASIC2.64□□□□□ -1.99
AMBRA1Q9C0C7 RNU6-1199P-201ENST00000411249 104 ntBASIC2.64□□□□□ -1.99
AMBRA1Q9C0C7 RNA5SP508-201ENST00000411327 119 ntBASIC2.64□□□□□ -1.99
AMBRA1Q9C0C7 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.64□□□□□ -1.99
AMBRA1Q9C0C7 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.64□□□□□ -1.99
AMBRA1Q9C0C7 RPL23AP3-201ENST00000453844 468 ntBASIC2.64□□□□□ -1.99
AMBRA1Q9C0C7 AL139109.1-201ENST00000455491 297 ntBASIC2.64□□□□□ -1.99
AMBRA1Q9C0C7 AC090515.1-201ENST00000465295 476 ntBASIC2.64□□□□□ -1.99
AMBRA1Q9C0C7 RNA5SP356-201ENST00000515972 94 ntBASIC2.64□□□□□ -1.99
AMBRA1Q9C0C7 RNU5F-4P-201ENST00000516581 114 ntBASIC2.64□□□□□ -1.99
AMBRA1Q9C0C7 RNU6-1098P-201ENST00000516772 96 ntBASIC2.64□□□□□ -1.99
AMBRA1Q9C0C7 AP002001.1-203ENST00000534002 267 ntBASIC2.64□□□□□ -1.99
AMBRA1Q9C0C7 MIR4643-201ENST00000577473 78 ntBASIC2.64□□□□□ -1.99
AMBRA1Q9C0C7 MIR3199-1-201ENST00000582434 88 ntBASIC2.64□□□□□ -1.99
AMBRA1Q9C0C7 ELOCP29-201ENST00000588193 334 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 175.3 ms