Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.94
SSBP3Q9BWW4 AL672296.1-201ENST00000427780 2158 ntBASIC2.9□□□□□ -1.94
SSBP3Q9BWW4 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
SSBP3Q9BWW4 RNU4-35P-201ENST00000362588 141 ntBASIC2.9□□□□□ -1.95
SSBP3Q9BWW4 RNU6-755P-201ENST00000364400 103 ntBASIC2.9□□□□□ -1.95
SSBP3Q9BWW4 RNA5SP267-201ENST00000364893 126 ntBASIC2.9□□□□□ -1.95
SSBP3Q9BWW4 RNU6-597P-201ENST00000365620 102 ntBASIC2.9□□□□□ -1.95
SSBP3Q9BWW4 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
SSBP3Q9BWW4 MIR518C-201ENST00000384822 101 ntBASIC2.9□□□□□ -1.95
SSBP3Q9BWW4 MIR548B-201ENST00000385247 97 ntBASIC2.9□□□□□ -1.95
SSBP3Q9BWW4 MIR147B-201ENST00000390185 80 ntBASIC2.9□□□□□ -1.95
SSBP3Q9BWW4 AL591034.1-201ENST00000407447 340 ntBASIC2.9□□□□□ -1.95
SSBP3Q9BWW4 SNORA36B-201ENST00000410438 131 ntBASIC2.9□□□□□ -1.95
SSBP3Q9BWW4 AIMP1P2-201ENST00000425294 312 ntBASIC2.9□□□□□ -1.95
SSBP3Q9BWW4 RPS4XP2-201ENST00000458402 793 ntBASIC2.9□□□□□ -1.95
SSBP3Q9BWW4 snoU13.28-201ENST00000459235 104 ntBASIC2.9□□□□□ -1.95
SSBP3Q9BWW4 RPL32P34-201ENST00000486380 400 ntBASIC2.9□□□□□ -1.95
SSBP3Q9BWW4 SNORA72.7-201ENST00000516349 94 ntBASIC2.9□□□□□ -1.95
SSBP3Q9BWW4 RNU7-115P-201ENST00000516433 55 ntBASIC2.9□□□□□ -1.95
SSBP3Q9BWW4 MIR4738-201ENST00000579134 87 ntBASIC2.9□□□□□ -1.95
SSBP3Q9BWW4 AC012493.2-201ENST00000595083 291 ntBASIC2.9□□□□□ -1.95
SSBP3Q9BWW4 AC099778.2-201ENST00000610904 211 ntBASIC2.9□□□□□ -1.95
SSBP3Q9BWW4 AL110115.1-201ENST00000614396 364 ntBASIC2.9□□□□□ -1.95
SSBP3Q9BWW4 MIR7975-201ENST00000619350 68 ntBASIC2.9□□□□□ -1.95
SSBP3Q9BWW4 AC012640.5-201ENST00000623897 319 ntBASIC2.9□□□□□ -1.95
SSBP3Q9BWW4 U6.95-201ENST00000636931 70 ntBASIC2.9□□□□□ -1.95
SSBP3Q9BWW4 AC068647.2-201ENST00000637380 353 ntBASIC2.9□□□□□ -1.95
SSBP3Q9BWW4 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
SSBP3Q9BWW4 AL049781.1-201ENST00000623195 3585 ntBASIC2.9□□□□□ -1.95
SSBP3Q9BWW4 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
SSBP3Q9BWW4 MFSD8-233ENST00000641482 4860 ntBASIC2.9□□□□□ -1.95
SSBP3Q9BWW4 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.89□□□□□ -1.95
SSBP3Q9BWW4 AC026241.1-201ENST00000517873 2142 ntBASIC2.89□□□□□ -1.95
SSBP3Q9BWW4 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
SSBP3Q9BWW4 SNORD114-7-201ENST00000362520 77 ntBASIC2.89□□□□□ -1.95
SSBP3Q9BWW4 RNU6-235P-201ENST00000362644 107 ntBASIC2.89□□□□□ -1.95
SSBP3Q9BWW4 SNORA25.7-201ENST00000364375 127 ntBASIC2.89□□□□□ -1.95
SSBP3Q9BWW4 SNORA67.2-201ENST00000384300 149 ntBASIC2.89□□□□□ -1.95
SSBP3Q9BWW4 MIR490-201ENST00000384865 128 ntBASIC2.89□□□□□ -1.95
SSBP3Q9BWW4 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
SSBP3Q9BWW4 Y_RNA.622-201ENST00000411091 108 ntBASIC2.89□□□□□ -1.95
SSBP3Q9BWW4 AC245291.1-201ENST00000419501 328 ntBASIC2.89□□□□□ -1.95
SSBP3Q9BWW4 AC245047.4-201ENST00000433189 144 ntBASIC2.89□□□□□ -1.95
SSBP3Q9BWW4 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC2.89□□□□□ -1.95
SSBP3Q9BWW4 HMGN2P20-201ENST00000437531 273 ntBASIC2.89□□□□□ -1.95
SSBP3Q9BWW4 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.89□□□□□ -1.95
SSBP3Q9BWW4 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.89□□□□□ -1.95
SSBP3Q9BWW4 HMGN2P16-201ENST00000456802 261 ntBASIC2.89□□□□□ -1.95
SSBP3Q9BWW4 U3.44-201ENST00000458938 192 ntBASIC2.89□□□□□ -1.95
SSBP3Q9BWW4 AP002884.2-201ENST00000471647 395 ntBASIC2.89□□□□□ -1.95
SSBP3Q9BWW4 NDUFB9P3-201ENST00000521269 501 ntBASIC2.89□□□□□ -1.95
SSBP3Q9BWW4 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC2.89□□□□□ -1.95
SSBP3Q9BWW4 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.89□□□□□ -1.95
SSBP3Q9BWW4 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC2.89□□□□□ -1.95
SSBP3Q9BWW4 MIR3613-201ENST00000579844 87 ntBASIC2.89□□□□□ -1.95
SSBP3Q9BWW4 MIR378D2-201ENST00000580636 98 ntBASIC2.89□□□□□ -1.95
SSBP3Q9BWW4 AL031274.2-201ENST00000599419 203 ntBASIC2.89□□□□□ -1.95
SSBP3Q9BWW4 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.89□□□□□ -1.95
SSBP3Q9BWW4 RPL17P51-201ENST00000605218 238 ntBASIC2.89□□□□□ -1.95
SSBP3Q9BWW4 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.89□□□□□ -1.95
SSBP3Q9BWW4 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SSBP3Q9BWW4 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SSBP3Q9BWW4 AC069528.2-201ENST00000624849 1991 ntBASIC2.89□□□□□ -1.95
SSBP3Q9BWW4 RNU6-655P-201ENST00000362858 107 ntBASIC2.88□□□□□ -1.95
SSBP3Q9BWW4 RNU6-1210P-201ENST00000363775 107 ntBASIC2.88□□□□□ -1.95
SSBP3Q9BWW4 RNA5SP42-201ENST00000364278 115 ntBASIC2.88□□□□□ -1.95
SSBP3Q9BWW4 RNU6-1305P-201ENST00000364353 104 ntBASIC2.88□□□□□ -1.95
SSBP3Q9BWW4 AC023141.4-201ENST00000412031 328 ntBASIC2.88□□□□□ -1.95
SSBP3Q9BWW4 AL158823.1-201ENST00000418441 478 ntBASIC2.88□□□□□ -1.95
SSBP3Q9BWW4 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.88□□□□□ -1.95
SSBP3Q9BWW4 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.88□□□□□ -1.95
SSBP3Q9BWW4 RNU6-589P-201ENST00000516485 107 ntBASIC2.88□□□□□ -1.95
SSBP3Q9BWW4 Y_RNA.692-201ENST00000516627 105 ntBASIC2.88□□□□□ -1.95
SSBP3Q9BWW4 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.88□□□□□ -1.95
SSBP3Q9BWW4 MIR3121-201ENST00000579680 77 ntBASIC2.88□□□□□ -1.95
SSBP3Q9BWW4 MIR4425-201ENST00000580572 84 ntBASIC2.88□□□□□ -1.95
SSBP3Q9BWW4 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.88□□□□□ -1.95
SSBP3Q9BWW4 MIR3914-2-201ENST00000637339 95 ntBASIC2.88□□□□□ -1.95
SSBP3Q9BWW4 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
SSBP3Q9BWW4 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SSBP3Q9BWW4 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SSBP3Q9BWW4 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
SSBP3Q9BWW4 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC2.88□□□□□ -1.95
SSBP3Q9BWW4 PWAR6-201ENST00000552334 4618 ntBASIC2.88□□□□□ -1.95
SSBP3Q9BWW4 AC002546.1-201ENST00000588041 2504 ntBASIC2.87□□□□□ -1.95
SSBP3Q9BWW4 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.87□□□□□ -1.95
SSBP3Q9BWW4 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC2.87□□□□□ -1.95
SSBP3Q9BWW4 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
SSBP3Q9BWW4 RNY1P11-201ENST00000363759 113 ntBASIC2.87□□□□□ -1.95
SSBP3Q9BWW4 SNORD45.3-201ENST00000363836 72 ntBASIC2.87□□□□□ -1.95
SSBP3Q9BWW4 RNU1-33P-201ENST00000364249 162 ntBASIC2.87□□□□□ -1.95
SSBP3Q9BWW4 RNU6-1082P-201ENST00000364574 107 ntBASIC2.87□□□□□ -1.95
SSBP3Q9BWW4 RNU6-283P-201ENST00000364788 107 ntBASIC2.87□□□□□ -1.95
SSBP3Q9BWW4 RNU6-1080P-201ENST00000383982 107 ntBASIC2.87□□□□□ -1.95
SSBP3Q9BWW4 SNORD17-201ENST00000390930 237 ntBASIC2.87□□□□□ -1.95
SSBP3Q9BWW4 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.87□□□□□ -1.95
SSBP3Q9BWW4 snoU13.22-201ENST00000459428 104 ntBASIC2.87□□□□□ -1.95
SSBP3Q9BWW4 RNU1-61P-201ENST00000516107 151 ntBASIC2.87□□□□□ -1.95
SSBP3Q9BWW4 AC120024.3-201ENST00000603167 156 ntBASIC2.87□□□□□ -1.95
SSBP3Q9BWW4 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 134.8 ms