Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 SCARNA4.1-201ENST00000628597 123 ntBASIC2.68□□□□□ -1.98
VRK1Q99986 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
VRK1Q99986 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
VRK1Q99986 AL391987.6-201ENST00000305671 199 ntBASIC2.67□□□□□ -1.98
VRK1Q99986 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
VRK1Q99986 Y_RNA.14-201ENST00000362415 103 ntBASIC2.67□□□□□ -1.98
VRK1Q99986 Y_RNA.188-201ENST00000363952 111 ntBASIC2.67□□□□□ -1.98
VRK1Q99986 RNU6-454P-201ENST00000364292 107 ntBASIC2.67□□□□□ -1.98
VRK1Q99986 Y_RNA.286-201ENST00000364813 102 ntBASIC2.67□□□□□ -1.98
VRK1Q99986 SNORA25B-201ENST00000365507 128 ntBASIC2.67□□□□□ -1.98
VRK1Q99986 Y_RNA.446-201ENST00000384178 104 ntBASIC2.67□□□□□ -1.98
VRK1Q99986 RNU6-1199P-201ENST00000411249 104 ntBASIC2.67□□□□□ -1.98
VRK1Q99986 AC009963.1-201ENST00000417265 157 ntBASIC2.67□□□□□ -1.98
VRK1Q99986 AP004217.1-201ENST00000480579 346 ntBASIC2.67□□□□□ -1.98
VRK1Q99986 HMGB3P17-201ENST00000504195 649 ntBASIC2.67□□□□□ -1.98
VRK1Q99986 AC107222.1-201ENST00000510899 637 ntBASIC2.67□□□□□ -1.98
VRK1Q99986 AC008885.1-201ENST00000514930 301 ntBASIC2.67□□□□□ -1.98
VRK1Q99986 SCARNA13-201ENST00000516672 275 ntBASIC2.67□□□□□ -1.98
VRK1Q99986 RNU2-12P-201ENST00000517216 168 ntBASIC2.67□□□□□ -1.98
VRK1Q99986 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.67□□□□□ -1.98
VRK1Q99986 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.67□□□□□ -1.98
VRK1Q99986 AC110588.1-201ENST00000559699 137 ntBASIC2.67□□□□□ -1.98
VRK1Q99986 MIR3684-201ENST00000579779 74 ntBASIC2.67□□□□□ -1.98
VRK1Q99986 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.67□□□□□ -1.98
VRK1Q99986 AC006001.4-201ENST00000622243 395 ntBASIC2.67□□□□□ -1.98
VRK1Q99986 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
VRK1Q99986 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
VRK1Q99986 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
VRK1Q99986 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
VRK1Q99986 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
VRK1Q99986 Y_RNA.332-201ENST00000365271 113 ntBASIC2.66□□□□□ -1.98
VRK1Q99986 Y_RNA.350-201ENST00000365409 98 ntBASIC2.66□□□□□ -1.98
VRK1Q99986 RNU6-326P-201ENST00000365480 107 ntBASIC2.66□□□□□ -1.98
VRK1Q99986 RNA5SP229-201ENST00000410809 99 ntBASIC2.66□□□□□ -1.98
VRK1Q99986 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.66□□□□□ -1.98
VRK1Q99986 AL137159.1-201ENST00000452808 512 ntBASIC2.66□□□□□ -1.98
VRK1Q99986 RNU7-57P-201ENST00000459540 60 ntBASIC2.66□□□□□ -1.98
VRK1Q99986 RPL39P38-201ENST00000467018 153 ntBASIC2.66□□□□□ -1.98
VRK1Q99986 S100A11P2-201ENST00000467589 312 ntBASIC2.66□□□□□ -1.98
VRK1Q99986 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.66□□□□□ -1.98
VRK1Q99986 RNU6-948P-201ENST00000516374 107 ntBASIC2.66□□□□□ -1.98
VRK1Q99986 NDUFA5P6-201ENST00000542110 379 ntBASIC2.66□□□□□ -1.98
VRK1Q99986 LARP7P3-201ENST00000579888 337 ntBASIC2.66□□□□□ -1.98
VRK1Q99986 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.66□□□□□ -1.98
VRK1Q99986 AC008749.1-201ENST00000597650 306 ntBASIC2.66□□□□□ -1.98
VRK1Q99986 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.66□□□□□ -1.98
VRK1Q99986 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.66□□□□□ -1.98
VRK1Q99986 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.66□□□□□ -1.98
VRK1Q99986 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
VRK1Q99986 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.98
VRK1Q99986 SNORD56.5-201ENST00000364281 72 ntBASIC2.65□□□□□ -1.99
VRK1Q99986 Y_RNA.237-201ENST00000364439 102 ntBASIC2.65□□□□□ -1.99
VRK1Q99986 Y_RNA.307-201ENST00000365022 117 ntBASIC2.65□□□□□ -1.99
VRK1Q99986 SNORA7.4-201ENST00000384249 137 ntBASIC2.65□□□□□ -1.99
VRK1Q99986 Y_RNA.569-201ENST00000384749 103 ntBASIC2.65□□□□□ -1.99
VRK1Q99986 AL139095.1-201ENST00000404326 391 ntBASIC2.65□□□□□ -1.99
VRK1Q99986 RNU2-38P-201ENST00000410856 79 ntBASIC2.65□□□□□ -1.99
VRK1Q99986 AC009238.1-201ENST00000442165 424 ntBASIC2.65□□□□□ -1.99
VRK1Q99986 AC009237.6-201ENST00000446969 424 ntBASIC2.65□□□□□ -1.99
VRK1Q99986 MTND4LP30-201ENST00000454092 297 ntBASIC2.65□□□□□ -1.99
VRK1Q99986 AP001486.1-201ENST00000463339 476 ntBASIC2.65□□□□□ -1.99
VRK1Q99986 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.65□□□□□ -1.99
VRK1Q99986 RNA5SP76-201ENST00000516277 87 ntBASIC2.65□□□□□ -1.99
VRK1Q99986 RNU2-34P-201ENST00000516534 121 ntBASIC2.65□□□□□ -1.99
VRK1Q99986 RNU6-667P-201ENST00000517186 102 ntBASIC2.65□□□□□ -1.99
VRK1Q99986 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.65□□□□□ -1.99
VRK1Q99986 DEFB108E-201ENST00000524692 240 ntBASIC2.65□□□□□ -1.99
VRK1Q99986 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.65□□□□□ -1.99
VRK1Q99986 PRELID2P1-201ENST00000552837 301 ntBASIC2.65□□□□□ -1.99
VRK1Q99986 AC006380.1-201ENST00000603598 186 ntBASIC2.65□□□□□ -1.99
VRK1Q99986 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.65□□□□□ -1.99
VRK1Q99986 SDR42E1P4-201ENST00000620894 481 ntBASIC2.65□□□□□ -1.99
VRK1Q99986 snoZ196.1-201ENST00000625269 89 ntBASIC2.65□□□□□ -1.99
VRK1Q99986 AL137790.1-201ENST00000634283 177 ntBASIC2.65□□□□□ -1.99
VRK1Q99986 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.65□□□□□ -1.99
VRK1Q99986 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
VRK1Q99986 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
VRK1Q99986 MTND5P6-201ENST00000422338 1798 ntBASIC2.64□□□□□ -1.99
VRK1Q99986 AC092593.1-201ENST00000515413 1815 ntBASIC2.64□□□□□ -1.99
VRK1Q99986 MIR22-201ENST00000362190 85 ntBASIC2.64□□□□□ -1.99
VRK1Q99986 Y_RNA.16-201ENST00000362421 102 ntBASIC2.64□□□□□ -1.99
VRK1Q99986 VTRNA1-1-201ENST00000363120 99 ntBASIC2.64□□□□□ -1.99
VRK1Q99986 Y_RNA.136-201ENST00000363444 102 ntBASIC2.64□□□□□ -1.99
VRK1Q99986 Y_RNA.243-201ENST00000364481 109 ntBASIC2.64□□□□□ -1.99
VRK1Q99986 Y_RNA.447-201ENST00000384184 113 ntBASIC2.64□□□□□ -1.99
VRK1Q99986 MIR592-201ENST00000384959 97 ntBASIC2.64□□□□□ -1.99
VRK1Q99986 SNORD67-201ENST00000390833 111 ntBASIC2.64□□□□□ -1.99
VRK1Q99986 SNORA53-201ENST00000391141 249 ntBASIC2.64□□□□□ -1.99
VRK1Q99986 SNORD88.1-201ENST00000408684 91 ntBASIC2.64□□□□□ -1.99
VRK1Q99986 AC123900.1-201ENST00000420390 96 ntBASIC2.64□□□□□ -1.99
VRK1Q99986 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.64□□□□□ -1.99
VRK1Q99986 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.64□□□□□ -1.99
VRK1Q99986 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.64□□□□□ -1.99
VRK1Q99986 RNU6-221P-201ENST00000459541 99 ntBASIC2.64□□□□□ -1.99
VRK1Q99986 AL049873.1-201ENST00000480540 376 ntBASIC2.64□□□□□ -1.99
VRK1Q99986 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.64□□□□□ -1.99
VRK1Q99986 SERF1AP1-201ENST00000514575 187 ntBASIC2.64□□□□□ -1.99
VRK1Q99986 RNU6-966P-201ENST00000516479 104 ntBASIC2.64□□□□□ -1.99
VRK1Q99986 RNU2-31P-201ENST00000516954 155 ntBASIC2.64□□□□□ -1.99
VRK1Q99986 RNU6-1271P-201ENST00000517049 105 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 148.7 ms