Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 SNORA81.3-201ENST00000517283 198 ntBASIC3.29□□□□□ -1.88
SHDQ96IW2 uc_338.1-201ENST00000612113 180 ntBASIC3.29□□□□□ -1.88
SHDQ96IW2 snoZ196.1-201ENST00000625269 89 ntBASIC3.29□□□□□ -1.88
SHDQ96IW2 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
SHDQ96IW2 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
SHDQ96IW2 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.28□□□□□ -1.88
SHDQ96IW2 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
SHDQ96IW2 MIR449A-201ENST00000362113 91 ntBASIC3.28□□□□□ -1.88
SHDQ96IW2 Y_RNA.117-201ENST00000363294 101 ntBASIC3.28□□□□□ -1.88
SHDQ96IW2 SNORD115-30-201ENST00000364117 82 ntBASIC3.28□□□□□ -1.88
SHDQ96IW2 RNU6-461P-201ENST00000364195 107 ntBASIC3.28□□□□□ -1.88
SHDQ96IW2 Y_RNA.292-201ENST00000364904 97 ntBASIC3.28□□□□□ -1.88
SHDQ96IW2 RNU6-662P-201ENST00000384253 104 ntBASIC3.28□□□□□ -1.88
SHDQ96IW2 RNU6-975P-201ENST00000384296 105 ntBASIC3.28□□□□□ -1.88
SHDQ96IW2 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
SHDQ96IW2 AC104332.2-201ENST00000429959 156 ntBASIC3.28□□□□□ -1.88
SHDQ96IW2 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC3.28□□□□□ -1.88
SHDQ96IW2 Y_RNA.638-201ENST00000459374 113 ntBASIC3.28□□□□□ -1.88
SHDQ96IW2 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.28□□□□□ -1.88
SHDQ96IW2 ATP5EP1-201ENST00000510257 156 ntBASIC3.28□□□□□ -1.88
SHDQ96IW2 RNA5SP490-201ENST00000517141 136 ntBASIC3.28□□□□□ -1.88
SHDQ96IW2 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.28□□□□□ -1.88
SHDQ96IW2 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.28□□□□□ -1.88
SHDQ96IW2 AC009127.3-201ENST00000570531 403 ntBASIC3.28□□□□□ -1.88
SHDQ96IW2 MIR3162-201ENST00000581818 82 ntBASIC3.28□□□□□ -1.88
SHDQ96IW2 MIR4282-201ENST00000583613 67 ntBASIC3.28□□□□□ -1.88
SHDQ96IW2 AC104984.5-201ENST00000586878 94 ntBASIC3.28□□□□□ -1.88
SHDQ96IW2 ELOCP29-201ENST00000588193 334 ntBASIC3.28□□□□□ -1.88
SHDQ96IW2 AC098479.1-201ENST00000609225 154 ntBASIC3.28□□□□□ -1.88
SHDQ96IW2 AC073349.3-201ENST00000617616 186 ntBASIC3.28□□□□□ -1.88
SHDQ96IW2 U6.115-201ENST00000636045 103 ntBASIC3.28□□□□□ -1.88
SHDQ96IW2 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SHDQ96IW2 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SHDQ96IW2 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.27□□□□□ -1.89
SHDQ96IW2 Y_RNA.76-201ENST00000362931 109 ntBASIC3.27□□□□□ -1.89
SHDQ96IW2 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.27□□□□□ -1.89
SHDQ96IW2 AC016925.1-201ENST00000458303 298 ntBASIC3.27□□□□□ -1.89
SHDQ96IW2 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.27□□□□□ -1.89
SHDQ96IW2 RNU2-34P-201ENST00000516534 121 ntBASIC3.27□□□□□ -1.89
SHDQ96IW2 AC107934.2-201ENST00000518653 310 ntBASIC3.27□□□□□ -1.89
SHDQ96IW2 MIR3117-201ENST00000584034 78 ntBASIC3.27□□□□□ -1.89
SHDQ96IW2 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.27□□□□□ -1.89
SHDQ96IW2 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.27□□□□□ -1.89
SHDQ96IW2 AL513302.2-201ENST00000562313 1842 ntBASIC3.27□□□□□ -1.89
SHDQ96IW2 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SHDQ96IW2 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.26□□□□□ -1.89
SHDQ96IW2 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
SHDQ96IW2 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SHDQ96IW2 Y_RNA.217-201ENST00000364214 105 ntBASIC3.26□□□□□ -1.89
SHDQ96IW2 Y_RNA.274-201ENST00000364714 101 ntBASIC3.26□□□□□ -1.89
SHDQ96IW2 RNU6-283P-201ENST00000364788 107 ntBASIC3.26□□□□□ -1.89
SHDQ96IW2 SNORD15B-201ENST00000384714 146 ntBASIC3.26□□□□□ -1.89
SHDQ96IW2 SNORA40.19-201ENST00000390846 128 ntBASIC3.26□□□□□ -1.89
SHDQ96IW2 RNU6-220P-201ENST00000390919 107 ntBASIC3.26□□□□□ -1.89
SHDQ96IW2 RN7SKP220-201ENST00000410611 288 ntBASIC3.26□□□□□ -1.89
SHDQ96IW2 Y_RNA.793-201ENST00000411222 111 ntBASIC3.26□□□□□ -1.89
SHDQ96IW2 HMGN2P18-201ENST00000450680 270 ntBASIC3.26□□□□□ -1.89
SHDQ96IW2 Y_RNA.641-201ENST00000459414 105 ntBASIC3.26□□□□□ -1.89
SHDQ96IW2 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.26□□□□□ -1.89
SHDQ96IW2 UBL5P2-201ENST00000583788 219 ntBASIC3.26□□□□□ -1.89
SHDQ96IW2 Z83818.1-201ENST00000603584 150 ntBASIC3.26□□□□□ -1.89
SHDQ96IW2 AC013412.1-201ENST00000610687 192 ntBASIC3.26□□□□□ -1.89
SHDQ96IW2 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.26□□□□□ -1.89
SHDQ96IW2 AC022149.2-201ENST00000621061 203 ntBASIC3.26□□□□□ -1.89
SHDQ96IW2 MIR1248-201ENST00000629190 106 ntBASIC3.26□□□□□ -1.89
SHDQ96IW2 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SHDQ96IW2 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SHDQ96IW2 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.25□□□□□ -1.89
SHDQ96IW2 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
SHDQ96IW2 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.25□□□□□ -1.89
SHDQ96IW2 RNU6-221P-201ENST00000459541 99 ntBASIC3.25□□□□□ -1.89
SHDQ96IW2 RNA5SP356-201ENST00000515972 94 ntBASIC3.25□□□□□ -1.89
SHDQ96IW2 RN7SKP40-201ENST00000517211 242 ntBASIC3.25□□□□□ -1.89
SHDQ96IW2 NDUFB9P3-201ENST00000521269 501 ntBASIC3.25□□□□□ -1.89
SHDQ96IW2 AP005660.1-201ENST00000522972 293 ntBASIC3.25□□□□□ -1.89
SHDQ96IW2 MIR2682-201ENST00000580305 110 ntBASIC3.25□□□□□ -1.89
SHDQ96IW2 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.25□□□□□ -1.89
SHDQ96IW2 AC005828.6-201ENST00000606610 232 ntBASIC3.25□□□□□ -1.89
SHDQ96IW2 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.25□□□□□ -1.89
SHDQ96IW2 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.25□□□□□ -1.89
SHDQ96IW2 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SHDQ96IW2 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SHDQ96IW2 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SHDQ96IW2 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.24□□□□□ -1.89
SHDQ96IW2 MIR411-201ENST00000362239 96 ntBASIC3.24□□□□□ -1.89
SHDQ96IW2 SNORD114-7-201ENST00000362520 77 ntBASIC3.24□□□□□ -1.89
SHDQ96IW2 RNU1-23P-201ENST00000363361 144 ntBASIC3.24□□□□□ -1.89
SHDQ96IW2 RNY4P28-201ENST00000365281 93 ntBASIC3.24□□□□□ -1.89
SHDQ96IW2 MIR627-201ENST00000384979 97 ntBASIC3.24□□□□□ -1.89
SHDQ96IW2 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
SHDQ96IW2 AL139095.1-201ENST00000404326 391 ntBASIC3.24□□□□□ -1.89
SHDQ96IW2 Y_RNA.626-201ENST00000411288 95 ntBASIC3.24□□□□□ -1.89
SHDQ96IW2 RNU6-57P-201ENST00000411348 103 ntBASIC3.24□□□□□ -1.89
SHDQ96IW2 EEF1A1P41-201ENST00000414667 207 ntBASIC3.24□□□□□ -1.89
SHDQ96IW2 AC008134.1-201ENST00000420943 193 ntBASIC3.24□□□□□ -1.89
SHDQ96IW2 AC003685.2-201ENST00000422795 395 ntBASIC3.24□□□□□ -1.89
SHDQ96IW2 AL137159.1-201ENST00000452808 512 ntBASIC3.24□□□□□ -1.89
SHDQ96IW2 SNORD2.1-201ENST00000458762 69 ntBASIC3.24□□□□□ -1.89
SHDQ96IW2 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.24□□□□□ -1.89
SHDQ96IW2 GTF3AP2-201ENST00000557014 266 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms