Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 snoU13.6-201ENST00000458785 104 ntBASIC1.92□□□□□ -2.1
PDLIM5Q96HC4 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.92□□□□□ -2.1
PDLIM5Q96HC4 RNU7-175P-201ENST00000515915 61 ntBASIC1.92□□□□□ -2.1
PDLIM5Q96HC4 MIR449C-201ENST00000516047 92 ntBASIC1.92□□□□□ -2.1
PDLIM5Q96HC4 RNU6-976P-201ENST00000516086 111 ntBASIC1.92□□□□□ -2.1
PDLIM5Q96HC4 CYP4A27P-201ENST00000567218 190 ntBASIC1.92□□□□□ -2.1
PDLIM5Q96HC4 MIR4435-1-201ENST00000582552 80 ntBASIC1.92□□□□□ -2.1
PDLIM5Q96HC4 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.92□□□□□ -2.1
PDLIM5Q96HC4 PCGEM1.1-201ENST00000613431 131 ntBASIC1.92□□□□□ -2.1
PDLIM5Q96HC4 AC087588.2-201ENST00000617667 426 ntBASIC1.92□□□□□ -2.1
PDLIM5Q96HC4 uc_338.20-201ENST00000621563 178 ntBASIC1.92□□□□□ -2.1
PDLIM5Q96HC4 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.92□□□□□ -2.1
PDLIM5Q96HC4 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.92□□□□□ -2.1
PDLIM5Q96HC4 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
PDLIM5Q96HC4 RNU6-378P-201ENST00000384324 107 ntBASIC1.91□□□□□ -2.1
PDLIM5Q96HC4 MIR32-201ENST00000384965 70 ntBASIC1.91□□□□□ -2.1
PDLIM5Q96HC4 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.91□□□□□ -2.1
PDLIM5Q96HC4 RPS26P42-201ENST00000413485 326 ntBASIC1.91□□□□□ -2.1
PDLIM5Q96HC4 MTCYBP10-201ENST00000424905 650 ntBASIC1.91□□□□□ -2.1
PDLIM5Q96HC4 OR2AQ1P-201ENST00000451972 200 ntBASIC1.91□□□□□ -2.1
PDLIM5Q96HC4 Y_RNA.631-201ENST00000459607 101 ntBASIC1.91□□□□□ -2.1
PDLIM5Q96HC4 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.91□□□□□ -2.1
PDLIM5Q96HC4 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.91□□□□□ -2.1
PDLIM5Q96HC4 SNORA44.1-201ENST00000517031 108 ntBASIC1.91□□□□□ -2.1
PDLIM5Q96HC4 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.91□□□□□ -2.1
PDLIM5Q96HC4 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.91□□□□□ -2.1
PDLIM5Q96HC4 MIR3171-201ENST00000584270 74 ntBASIC1.91□□□□□ -2.1
PDLIM5Q96HC4 AL355802.3-201ENST00000607571 545 ntBASIC1.91□□□□□ -2.1
PDLIM5Q96HC4 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
PDLIM5Q96HC4 AC245060.5-201ENST00000610778 3293 ntBASIC1.91□□□□□ -2.1
PDLIM5Q96HC4 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
PDLIM5Q96HC4 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.91□□□□□ -2.1
PDLIM5Q96HC4 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
PDLIM5Q96HC4 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.9□□□□□ -2.1
PDLIM5Q96HC4 RNU6-308P-201ENST00000390957 107 ntBASIC1.9□□□□□ -2.11
PDLIM5Q96HC4 RNA5SP213-201ENST00000391031 106 ntBASIC1.9□□□□□ -2.11
PDLIM5Q96HC4 MIR190B-201ENST00000401119 79 ntBASIC1.9□□□□□ -2.11
PDLIM5Q96HC4 RNU2-40P-201ENST00000410833 196 ntBASIC1.9□□□□□ -2.11
PDLIM5Q96HC4 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.9□□□□□ -2.11
PDLIM5Q96HC4 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
PDLIM5Q96HC4 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.9□□□□□ -2.11
PDLIM5Q96HC4 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.9□□□□□ -2.11
PDLIM5Q96HC4 CHEK2P4-201ENST00000450340 246 ntBASIC1.9□□□□□ -2.11
PDLIM5Q96HC4 AC105758.1-201ENST00000506038 399 ntBASIC1.9□□□□□ -2.11
PDLIM5Q96HC4 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.9□□□□□ -2.11
PDLIM5Q96HC4 EIF4A1P12-201ENST00000551910 141 ntBASIC1.9□□□□□ -2.11
PDLIM5Q96HC4 AC004584.2-201ENST00000570407 410 ntBASIC1.9□□□□□ -2.11
PDLIM5Q96HC4 MIR1244-1-201ENST00000612829 85 ntBASIC1.9□□□□□ -2.11
PDLIM5Q96HC4 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.9□□□□□ -2.11
PDLIM5Q96HC4 AC138305.3-201ENST00000624988 240 ntBASIC1.9□□□□□ -2.11
PDLIM5Q96HC4 MIR1244-3-201ENST00000635744 85 ntBASIC1.9□□□□□ -2.11
PDLIM5Q96HC4 MIR1244-2-201ENST00000636449 85 ntBASIC1.9□□□□□ -2.11
PDLIM5Q96HC4 MIR1244-4-202ENST00000636813 85 ntBASIC1.9□□□□□ -2.11
PDLIM5Q96HC4 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.11
PDLIM5Q96HC4 LINC02555-201ENST00000563933 1951 ntBASIC1.89□□□□□ -2.11
PDLIM5Q96HC4 Y_RNA.28-201ENST00000362554 111 ntBASIC1.89□□□□□ -2.11
PDLIM5Q96HC4 Y_RNA.106-201ENST00000363189 100 ntBASIC1.89□□□□□ -2.11
PDLIM5Q96HC4 SNORD115-8-201ENST00000363856 82 ntBASIC1.89□□□□□ -2.11
PDLIM5Q96HC4 RNA5SP493-201ENST00000364115 91 ntBASIC1.89□□□□□ -2.11
PDLIM5Q96HC4 Y_RNA.216-201ENST00000364205 93 ntBASIC1.89□□□□□ -2.11
PDLIM5Q96HC4 SNORD115-38-201ENST00000365037 82 ntBASIC1.89□□□□□ -2.11
PDLIM5Q96HC4 Y_RNA.332-201ENST00000365271 113 ntBASIC1.89□□□□□ -2.11
PDLIM5Q96HC4 Y_RNA.445-201ENST00000384168 102 ntBASIC1.89□□□□□ -2.11
PDLIM5Q96HC4 RNY1P14-201ENST00000384426 108 ntBASIC1.89□□□□□ -2.11
PDLIM5Q96HC4 RNU6-1011P-201ENST00000384668 107 ntBASIC1.89□□□□□ -2.11
PDLIM5Q96HC4 RNU6-700P-201ENST00000391043 107 ntBASIC1.89□□□□□ -2.11
PDLIM5Q96HC4 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.89□□□□□ -2.11
PDLIM5Q96HC4 MIR548P-201ENST00000408336 84 ntBASIC1.89□□□□□ -2.11
PDLIM5Q96HC4 AC123900.1-201ENST00000420390 96 ntBASIC1.89□□□□□ -2.11
PDLIM5Q96HC4 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.89□□□□□ -2.11
PDLIM5Q96HC4 AC112492.4-201ENST00000456549 352 ntBASIC1.89□□□□□ -2.11
PDLIM5Q96HC4 AC007215.1-201ENST00000464893 276 ntBASIC1.89□□□□□ -2.11
PDLIM5Q96HC4 TOMM22P6-201ENST00000465035 409 ntBASIC1.89□□□□□ -2.11
PDLIM5Q96HC4 AL163540.1-201ENST00000485382 386 ntBASIC1.89□□□□□ -2.11
PDLIM5Q96HC4 RNA5SP364-201ENST00000516938 78 ntBASIC1.89□□□□□ -2.11
PDLIM5Q96HC4 Y_RNA.711-201ENST00000516993 102 ntBASIC1.89□□□□□ -2.11
PDLIM5Q96HC4 AC027288.2-201ENST00000553028 243 ntBASIC1.89□□□□□ -2.11
PDLIM5Q96HC4 ANP32BP3-201ENST00000559213 706 ntBASIC1.89□□□□□ -2.11
PDLIM5Q96HC4 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.89□□□□□ -2.11
PDLIM5Q96HC4 7SK.7-201ENST00000603504 247 ntBASIC1.89□□□□□ -2.11
PDLIM5Q96HC4 AC137590.2-201ENST00000619709 240 ntBASIC1.89□□□□□ -2.11
PDLIM5Q96HC4 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.89□□□□□ -2.11
PDLIM5Q96HC4 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
PDLIM5Q96HC4 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
PDLIM5Q96HC4 Y_RNA.428-201ENST00000384078 102 ntBASIC1.88□□□□□ -2.11
PDLIM5Q96HC4 MIR153-2-201ENST00000385225 87 ntBASIC1.88□□□□□ -2.11
PDLIM5Q96HC4 SNORA48.1-201ENST00000390879 135 ntBASIC1.88□□□□□ -2.11
PDLIM5Q96HC4 MIR1302-11-201ENST00000408051 138 ntBASIC1.88□□□□□ -2.11
PDLIM5Q96HC4 MIR1302-9-201ENST00000408365 138 ntBASIC1.88□□□□□ -2.11
PDLIM5Q96HC4 MIR1302-10-201ENST00000408734 138 ntBASIC1.88□□□□□ -2.11
PDLIM5Q96HC4 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.88□□□□□ -2.11
PDLIM5Q96HC4 AC099799.1-201ENST00000439809 192 ntBASIC1.88□□□□□ -2.11
PDLIM5Q96HC4 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.88□□□□□ -2.11
PDLIM5Q96HC4 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.88□□□□□ -2.11
PDLIM5Q96HC4 RNU1-131P-201ENST00000458943 161 ntBASIC1.88□□□□□ -2.11
PDLIM5Q96HC4 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.88□□□□□ -2.11
PDLIM5Q96HC4 AC107393.1-201ENST00000512403 346 ntBASIC1.88□□□□□ -2.11
PDLIM5Q96HC4 RNU5F-4P-201ENST00000516581 114 ntBASIC1.88□□□□□ -2.11
PDLIM5Q96HC4 RNU4-77P-201ENST00000516692 156 ntBASIC1.88□□□□□ -2.11
PDLIM5Q96HC4 RNU6-58P-201ENST00000517143 103 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 137.2 ms