Protein–RNA interactions for Protein: Q96AJ9

VTI1A, Vesicle transport through interaction with t-SNAREs homolog 1A, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1AQ96AJ9 RPS27P26-201ENST00000494583 239 ntBASIC3.96□□□□□ -1.78
VTI1AQ96AJ9 MIR449C-201ENST00000516047 92 ntBASIC3.96□□□□□ -1.78
VTI1AQ96AJ9 RNU6-1007P-201ENST00000516586 107 ntBASIC3.96□□□□□ -1.78
VTI1AQ96AJ9 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.96□□□□□ -1.78
VTI1AQ96AJ9 AC109810.1-201ENST00000534066 224 ntBASIC3.96□□□□□ -1.78
VTI1AQ96AJ9 RPL17P51-201ENST00000605218 238 ntBASIC3.96□□□□□ -1.78
VTI1AQ96AJ9 AL365222.1-201ENST00000614661 98 ntBASIC3.96□□□□□ -1.78
VTI1AQ96AJ9 AC110079.1-202ENST00000635213 138 ntBASIC3.96□□□□□ -1.78
VTI1AQ96AJ9 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
VTI1AQ96AJ9 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
VTI1AQ96AJ9 PWAR6-201ENST00000552334 4618 ntBASIC3.96□□□□□ -1.78
VTI1AQ96AJ9 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.96□□□□□ -1.78
VTI1AQ96AJ9 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
VTI1AQ96AJ9 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.96□□□□□ -1.78
VTI1AQ96AJ9 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.95□□□□□ -1.78
VTI1AQ96AJ9 TNPO1P3-201ENST00000436471 2662 ntBASIC3.95□□□□□ -1.78
VTI1AQ96AJ9 RNU6-1205P-201ENST00000363625 106 ntBASIC3.95□□□□□ -1.78
VTI1AQ96AJ9 SNORA22C-201ENST00000384614 134 ntBASIC3.95□□□□□ -1.78
VTI1AQ96AJ9 RNU6-417P-201ENST00000384712 107 ntBASIC3.95□□□□□ -1.78
VTI1AQ96AJ9 MIR616-201ENST00000385293 97 ntBASIC3.95□□□□□ -1.78
VTI1AQ96AJ9 MIR526A2-201ENST00000390198 65 ntBASIC3.95□□□□□ -1.78
VTI1AQ96AJ9 RNU6-1154P-201ENST00000391001 104 ntBASIC3.95□□□□□ -1.78
VTI1AQ96AJ9 SNORA48.8-201ENST00000391324 134 ntBASIC3.95□□□□□ -1.78
VTI1AQ96AJ9 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.95□□□□□ -1.78
VTI1AQ96AJ9 NDUFB1P1-201ENST00000435191 180 ntBASIC3.95□□□□□ -1.78
VTI1AQ96AJ9 AC006028.1-201ENST00000438379 402 ntBASIC3.95□□□□□ -1.78
VTI1AQ96AJ9 AC245047.8-201ENST00000456455 284 ntBASIC3.95□□□□□ -1.78
VTI1AQ96AJ9 AC010409.1-201ENST00000487382 476 ntBASIC3.95□□□□□ -1.78
VTI1AQ96AJ9 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.95□□□□□ -1.78
VTI1AQ96AJ9 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC3.95□□□□□ -1.78
VTI1AQ96AJ9 MIR548X2-201ENST00000579776 100 ntBASIC3.95□□□□□ -1.78
VTI1AQ96AJ9 AL670379.2-201ENST00000604983 252 ntBASIC3.95□□□□□ -1.78
VTI1AQ96AJ9 SNORA50A-202ENST00000629536 136 ntBASIC3.95□□□□□ -1.78
VTI1AQ96AJ9 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.95□□□□□ -1.78
VTI1AQ96AJ9 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.95□□□□□ -1.78
VTI1AQ96AJ9 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.95□□□□□ -1.78
VTI1AQ96AJ9 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.95□□□□□ -1.78
VTI1AQ96AJ9 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
VTI1AQ96AJ9 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
VTI1AQ96AJ9 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.94□□□□□ -1.78
VTI1AQ96AJ9 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
VTI1AQ96AJ9 AC006504.1-201ENST00000562493 3666 ntBASIC3.94□□□□□ -1.78
VTI1AQ96AJ9 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
VTI1AQ96AJ9 MIR423-201ENST00000362201 94 ntBASIC3.94□□□□□ -1.78
VTI1AQ96AJ9 RNU6-735P-201ENST00000410612 107 ntBASIC3.94□□□□□ -1.78
VTI1AQ96AJ9 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.94□□□□□ -1.78
VTI1AQ96AJ9 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC3.94□□□□□ -1.78
VTI1AQ96AJ9 RPS29P12-201ENST00000460178 152 ntBASIC3.94□□□□□ -1.78
VTI1AQ96AJ9 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.94□□□□□ -1.78
VTI1AQ96AJ9 RNU6-62P-201ENST00000516526 102 ntBASIC3.94□□□□□ -1.78
VTI1AQ96AJ9 RNU5F-4P-201ENST00000516581 114 ntBASIC3.94□□□□□ -1.78
VTI1AQ96AJ9 AC008739.2-201ENST00000597006 317 ntBASIC3.94□□□□□ -1.78
VTI1AQ96AJ9 YPEL5P2-201ENST00000605553 359 ntBASIC3.94□□□□□ -1.78
VTI1AQ96AJ9 MIR7112-201ENST00000616126 65 ntBASIC3.94□□□□□ -1.78
VTI1AQ96AJ9 AP003355.3-201ENST00000623465 114 ntBASIC3.94□□□□□ -1.78
VTI1AQ96AJ9 AC090517.3-201ENST00000625170 141 ntBASIC3.94□□□□□ -1.78
VTI1AQ96AJ9 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.94□□□□□ -1.78
VTI1AQ96AJ9 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.94□□□□□ -1.78
VTI1AQ96AJ9 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
VTI1AQ96AJ9 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
VTI1AQ96AJ9 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.94□□□□□ -1.78
VTI1AQ96AJ9 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
VTI1AQ96AJ9 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.94□□□□□ -1.78
VTI1AQ96AJ9 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.93□□□□□ -1.78
VTI1AQ96AJ9 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.93□□□□□ -1.78
VTI1AQ96AJ9 RNA5SP42-201ENST00000364278 115 ntBASIC3.93□□□□□ -1.78
VTI1AQ96AJ9 RNU4-11P-201ENST00000365287 132 ntBASIC3.93□□□□□ -1.78
VTI1AQ96AJ9 AP002088.1-201ENST00000382740 395 ntBASIC3.93□□□□□ -1.78
VTI1AQ96AJ9 MT-TT-201ENST00000387460 66 ntBASIC3.93□□□□□ -1.78
VTI1AQ96AJ9 AL355796.1-201ENST00000406706 323 ntBASIC3.93□□□□□ -1.78
VTI1AQ96AJ9 AC002075.2-201ENST00000425207 252 ntBASIC3.93□□□□□ -1.78
VTI1AQ96AJ9 TRIAP1P1-201ENST00000427062 225 ntBASIC3.93□□□□□ -1.78
VTI1AQ96AJ9 SEM1P1-201ENST00000506694 209 ntBASIC3.93□□□□□ -1.78
VTI1AQ96AJ9 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.93□□□□□ -1.78
VTI1AQ96AJ9 AC107027.2-201ENST00000512197 115 ntBASIC3.93□□□□□ -1.78
VTI1AQ96AJ9 SNORA70.12-201ENST00000516084 153 ntBASIC3.93□□□□□ -1.78
VTI1AQ96AJ9 RNU6-313P-201ENST00000516317 112 ntBASIC3.93□□□□□ -1.78
VTI1AQ96AJ9 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.93□□□□□ -1.78
VTI1AQ96AJ9 MIR4738-201ENST00000579134 87 ntBASIC3.93□□□□□ -1.78
VTI1AQ96AJ9 AC103810.1-201ENST00000579873 453 ntBASIC3.93□□□□□ -1.78
VTI1AQ96AJ9 MIR4298-201ENST00000584380 73 ntBASIC3.93□□□□□ -1.78
VTI1AQ96AJ9 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
VTI1AQ96AJ9 MFSD8-233ENST00000641482 4860 ntBASIC3.93□□□□□ -1.78
VTI1AQ96AJ9 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
VTI1AQ96AJ9 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
VTI1AQ96AJ9 RNU6-1168P-201ENST00000390831 104 ntBASIC3.92□□□□□ -1.78
VTI1AQ96AJ9 RPS29P31-201ENST00000446147 164 ntBASIC3.92□□□□□ -1.78
VTI1AQ96AJ9 SNORA25.12-201ENST00000516202 82 ntBASIC3.92□□□□□ -1.78
VTI1AQ96AJ9 SCARNA17.1-201ENST00000516211 143 ntBASIC3.92□□□□□ -1.78
VTI1AQ96AJ9 SCARNA17.2-201ENST00000516334 143 ntBASIC3.92□□□□□ -1.78
VTI1AQ96AJ9 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.92□□□□□ -1.78
VTI1AQ96AJ9 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.92□□□□□ -1.78
VTI1AQ96AJ9 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.92□□□□□ -1.78
VTI1AQ96AJ9 MIR4765-201ENST00000585007 77 ntBASIC3.92□□□□□ -1.78
VTI1AQ96AJ9 DNAJC19P2-201ENST00000593340 302 ntBASIC3.92□□□□□ -1.78
VTI1AQ96AJ9 SCARNA17.4-201ENST00000614296 143 ntBASIC3.92□□□□□ -1.78
VTI1AQ96AJ9 AL162274.2-201ENST00000614406 332 ntBASIC3.92□□□□□ -1.78
VTI1AQ96AJ9 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
VTI1AQ96AJ9 AC010332.2-201ENST00000613083 1904 ntBASIC3.91□□□□□ -1.78
VTI1AQ96AJ9 AL513302.2-201ENST00000562313 1842 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 135.7 ms