| CLUAP1 | Q96AJ1 | AL392103.1-201 | ENST00000447000 | 198 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| CLUAP1 | Q96AJ1 | RPL23AP7-203 | ENST00000449021 | 469 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| CLUAP1 | Q96AJ1 | AC090515.1-201 | ENST00000465295 | 476 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| CLUAP1 | Q96AJ1 | AP001001.1-201 | ENST00000532422 | 826 nt | TSL 3 BASIC | 4.16 | □□□□□ -1.74 | | |
| CLUAP1 | Q96AJ1 | AC023043.3-201 | ENST00000593113 | 385 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| CLUAP1 | Q96AJ1 | CNOT6L-201 | ENST00000504123 | 8843 nt | APPRIS P1 TSL 2 BASIC | 4.16 | □□□□□ -1.74 | | |
| CLUAP1 | Q96AJ1 | KIAA1109-203 | ENST00000388738 | 15574 nt | APPRIS P1 TSL 1 (best) BASIC | 4.15 | □□□□□ -1.74 | | |
| CLUAP1 | Q96AJ1 | Y_RNA.310-201 | ENST00000365063 | 113 nt | BASIC | 4.15 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | SNORA70.4-201 | ENST00000365509 | 134 nt | BASIC | 4.15 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | AC115115.1-201 | ENST00000449927 | 248 nt | BASIC | 4.15 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | RNA5SP490-201 | ENST00000517141 | 136 nt | BASIC | 4.15 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | AC102945.1-201 | ENST00000522640 | 407 nt | TSL 2 BASIC | 4.15 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | MIR4308-201 | ENST00000580634 | 81 nt | BASIC | 4.15 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | MBNL1-218 | ENST00000485910 | 4257 nt | TSL 1 (best) BASIC | 4.15 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | CENPJ-205 | ENST00000545981 | 4299 nt | TSL 2 BASIC | 4.15 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | ADGRV1-201 | ENST00000405460 | 19557 nt | APPRIS P1 TSL 1 (best) BASIC | 4.15 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | ZNF804A-202 | ENST00000613975 | 3986 nt | TSL 5 BASIC | 4.14 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | SPEF2-203 | ENST00000440995 | 5964 nt | APPRIS ALT2 TSL 5 BASIC | 4.14 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | CPD-202 | ENST00000543464 | 4007 nt | TSL 2 BASIC | 4.14 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | AC138915.1-201 | ENST00000565427 | 1685 nt | BASIC | 4.14 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | GABRG2-209 | ENST00000638660 | 3799 nt | TSL 5 BASIC | 4.14 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | Y_RNA.7-201 | ENST00000362352 | 102 nt | BASIC | 4.14 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | RNA5SP383-201 | ENST00000362934 | 120 nt | BASIC | 4.14 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | RNA5SP72-201 | ENST00000364442 | 117 nt | BASIC | 4.14 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | MIR561-201 | ENST00000385216 | 97 nt | BASIC | 4.14 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | TRDJ2-201 | ENST00000390475 | 54 nt | APPRIS P1 BASIC | 4.14 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | RNU6-493P-201 | ENST00000391321 | 108 nt | BASIC | 4.14 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | RNU6-57P-201 | ENST00000411348 | 103 nt | BASIC | 4.14 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | AL583835.2-201 | ENST00000435483 | 500 nt | TSL 2 BASIC | 4.14 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | AC108488.2-201 | ENST00000438485 | 421 nt | APPRIS P1 TSL 3 BASIC | 4.14 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | AC022469.2-201 | ENST00000554759 | 396 nt | TSL 5 BASIC | 4.14 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | TTC28-AS1_2.1-201 | ENST00000611117 | 157 nt | BASIC | 4.14 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | AC012314.7-201 | ENST00000619693 | 93 nt | BASIC | 4.14 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | DICER1-203 | ENST00000526495 | 10331 nt | APPRIS P1 TSL 5 BASIC | 4.14 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | KNL1-202 | ENST00000399668 | 7607 nt | APPRIS ALT2 TSL 1 (best) BASIC | 4.14 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | PPP2R5A-205 | ENST00000537030 | 1719 nt | TSL 2 BASIC | 4.13 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | PRRG1-202 | ENST00000449135 | 4481 nt | APPRIS P1 TSL 1 (best) BASIC | 4.13 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | RNU6-144P-201 | ENST00000383951 | 107 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | SNORA20B-201 | ENST00000384220 | 132 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | MIR34B-201 | ENST00000385076 | 84 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | SNORA48.5-201 | ENST00000391143 | 135 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | MAMDC2-AS1-203 | ENST00000420573 | 339 nt | TSL 3 BASIC | 4.13 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | HMGN2P18-201 | ENST00000450680 | 270 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | AL137159.1-201 | ENST00000452808 | 512 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | RPL36AP21-201 | ENST00000490372 | 323 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | RNY3P16-201 | ENST00000516338 | 101 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | AC100767.1-201 | ENST00000528178 | 123 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | MIR7975-201 | ENST00000619350 | 68 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | ARHGAP12-201 | ENST00000311380 | 4625 nt | TSL 1 (best) BASIC | 4.13 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | SEMA3D-201 | ENST00000284136 | 6265 nt | APPRIS P1 TSL 5 BASIC | 4.13 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | Z83843.1-201 | ENST00000604070 | 3685 nt | BASIC | 4.13 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | CHD1-201 | ENST00000284049 | 6457 nt | APPRIS P1 TSL 1 (best) BASIC | 4.12 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | FER-201 | ENST00000281092 | 12119 nt | APPRIS P1 TSL 1 (best) BASIC | 4.12 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | SNORA27.1-201 | ENST00000362604 | 124 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | Y_RNA.571-201 | ENST00000384753 | 98 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | SNORA26.5-201 | ENST00000391215 | 123 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | AC104332.2-201 | ENST00000429959 | 156 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | AL121890.1-201 | ENST00000435457 | 205 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | AL135790.2-201 | ENST00000437701 | 267 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | AL357134.1-201 | ENST00000445848 | 426 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | PRSS3P4-201 | ENST00000453323 | 162 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | RN7SL330P-201 | ENST00000469709 | 307 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | AC006483.1-201 | ENST00000487308 | 313 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | HMGB3P3-201 | ENST00000510526 | 400 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | AC022559.1-201 | ENST00000520905 | 205 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | MIR1248-201 | ENST00000629190 | 106 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | CCSAP-202 | ENST00000366686 | 4399 nt | TSL 2 BASIC | 4.11 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | DDX60L-207 | ENST00000505890 | 4568 nt | TSL 2 BASIC | 4.11 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | ZNF280D-204 | ENST00000558320 | 3666 nt | TSL 1 (best) BASIC | 4.11 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | SNORA8.3-201 | ENST00000384679 | 139 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | TRDJ3-201 | ENST00000390476 | 59 nt | APPRIS P1 BASIC | 4.11 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | SNORA11.1-201 | ENST00000408133 | 129 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | AC003685.2-201 | ENST00000422795 | 395 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | AL445490.2-201 | ENST00000440492 | 441 nt | TSL 3 BASIC | 4.11 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | U8.19-201 | ENST00000459095 | 133 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | SNORD65B-201 | ENST00000459126 | 73 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | RNU6-965P-201 | ENST00000516721 | 96 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | AC025647.1-201 | ENST00000517879 | 253 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | MIR2682-201 | ENST00000580305 | 110 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | AL355297.2-201 | ENST00000604792 | 129 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | AC007218.2-201 | ENST00000636913 | 179 nt | TSL 5 BASIC | 4.11 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | WDR72-201 | ENST00000360509 | 5887 nt | APPRIS P2 TSL 1 (best) BASIC | 4.11 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | AKAP7-209 | ENST00000541650 | 2008 nt | TSL 5 BASIC | 4.11 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | MIR208A-201 | ENST00000362287 | 71 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | RNU6-312P-201 | ENST00000364629 | 107 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | SPRR2E-201 | ENST00000368750 | 678 nt | APPRIS P1 TSL 1 (best) BASIC | 4.1 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | AL355796.1-201 | ENST00000406706 | 323 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | AC245052.1-201 | ENST00000426213 | 410 nt | TSL 3 BASIC | 4.1 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | MTND2P29-201 | ENST00000438595 | 412 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | RPL23AP58-201 | ENST00000440453 | 469 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | RPS20P10-201 | ENST00000451209 | 253 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | RPS26P55-201 | ENST00000471178 | 356 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | AC010255.2-201 | ENST00000505209 | 428 nt | TSL 3 BASIC | 4.1 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | RN7SKP164-201 | ENST00000516138 | 266 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | SUMO2P18-201 | ENST00000518873 | 252 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | AC068657.1-201 | ENST00000520807 | 306 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | AP001458.1-201 | ENST00000532626 | 92 nt | TSL 3 BASIC | 4.1 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | MRPS18CP4-201 | ENST00000535821 | 231 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | KTN1-214 | ENST00000554507 | 2057 nt | TSL 1 (best) BASIC | 4.1 | □□□□□ -1.75 | | |
| CLUAP1 | Q96AJ1 | CACNB4-222 | ENST00000636350 | 7654 nt | TSL 5 BASIC | 4.1 | □□□□□ -1.75 | | |