Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.15□□□□□ -1.91
RTF1Q92541 AC073901.1-201ENST00000462471 408 ntBASIC3.15□□□□□ -1.91
RTF1Q92541 AC026436.1-201ENST00000510537 270 ntBASIC3.15□□□□□ -1.91
RTF1Q92541 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC3.15□□□□□ -1.91
RTF1Q92541 AC103810.6-201ENST00000606708 136 ntBASIC3.15□□□□□ -1.91
RTF1Q92541 AC046143.2-201ENST00000609789 160 ntBASIC3.15□□□□□ -1.91
RTF1Q92541 SDR42E1P4-201ENST00000620894 481 ntBASIC3.15□□□□□ -1.91
RTF1Q92541 AC010329.5-201ENST00000623497 2174 ntBASIC3.15□□□□□ -1.91
RTF1Q92541 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.14□□□□□ -1.91
RTF1Q92541 MIR29B2-201ENST00000385055 81 ntBASIC3.14□□□□□ -1.91
RTF1Q92541 RNU2-20P-201ENST00000410425 191 ntBASIC3.14□□□□□ -1.91
RTF1Q92541 AC091179.3-201ENST00000474761 144 ntBASIC3.14□□□□□ -1.91
RTF1Q92541 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.14□□□□□ -1.91
RTF1Q92541 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.14□□□□□ -1.91
RTF1Q92541 RNU6-496P-201ENST00000516145 99 ntBASIC3.14□□□□□ -1.91
RTF1Q92541 MIR3668-201ENST00000582138 75 ntBASIC3.14□□□□□ -1.91
RTF1Q92541 AC008739.2-201ENST00000597006 317 ntBASIC3.14□□□□□ -1.91
RTF1Q92541 RPL30P11-203ENST00000598995 310 ntBASIC3.14□□□□□ -1.91
RTF1Q92541 MZT1P2-201ENST00000604387 248 ntBASIC3.14□□□□□ -1.91
RTF1Q92541 AL670379.2-201ENST00000604983 252 ntBASIC3.14□□□□□ -1.91
RTF1Q92541 AC090425.1-201ENST00000610007 140 ntBASIC3.14□□□□□ -1.91
RTF1Q92541 AC005562.2-201ENST00000618264 111 ntBASIC3.14□□□□□ -1.91
RTF1Q92541 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RTF1Q92541 MTND5P6-201ENST00000422338 1798 ntBASIC3.13□□□□□ -1.91
RTF1Q92541 snoU2_19.1-201ENST00000362361 80 ntBASIC3.13□□□□□ -1.91
RTF1Q92541 RNU6-626P-201ENST00000363354 107 ntBASIC3.13□□□□□ -1.91
RTF1Q92541 SNORD114-30-201ENST00000364448 72 ntBASIC3.13□□□□□ -1.91
RTF1Q92541 Y_RNA.478-201ENST00000384358 107 ntBASIC3.13□□□□□ -1.91
RTF1Q92541 MIR549A-201ENST00000385268 96 ntBASIC3.13□□□□□ -1.91
RTF1Q92541 OOSP1P1-201ENST00000423265 274 ntBASIC3.13□□□□□ -1.91
RTF1Q92541 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.13□□□□□ -1.91
RTF1Q92541 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.13□□□□□ -1.91
RTF1Q92541 RNU6-1023P-201ENST00000516137 106 ntBASIC3.13□□□□□ -1.91
RTF1Q92541 RNU6-826P-201ENST00000516827 104 ntBASIC3.13□□□□□ -1.91
RTF1Q92541 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.13□□□□□ -1.91
RTF1Q92541 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.13□□□□□ -1.91
RTF1Q92541 RPL17P51-201ENST00000605218 238 ntBASIC3.13□□□□□ -1.91
RTF1Q92541 SNORD113-5-201ENST00000607261 78 ntBASIC3.13□□□□□ -1.91
RTF1Q92541 AL357075.2-201ENST00000614906 189 ntBASIC3.13□□□□□ -1.91
RTF1Q92541 TCL6_2.1-201ENST00000615162 119 ntBASIC3.13□□□□□ -1.91
RTF1Q92541 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.13□□□□□ -1.91
RTF1Q92541 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC3.12□□□□□ -1.91
RTF1Q92541 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
RTF1Q92541 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
RTF1Q92541 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RTF1Q92541 AC016717.2-201ENST00000609089 5141 ntBASIC3.12□□□□□ -1.91
RTF1Q92541 AL391987.6-201ENST00000305671 199 ntBASIC3.12□□□□□ -1.91
RTF1Q92541 RNU4-90P-201ENST00000362773 141 ntBASIC3.12□□□□□ -1.91
RTF1Q92541 VTRNA1-1-201ENST00000363120 99 ntBASIC3.12□□□□□ -1.91
RTF1Q92541 RNU6-961P-201ENST00000363893 105 ntBASIC3.12□□□□□ -1.91
RTF1Q92541 RNU6-20P-201ENST00000384106 107 ntBASIC3.12□□□□□ -1.91
RTF1Q92541 SNORA3.2-201ENST00000408221 125 ntBASIC3.12□□□□□ -1.91
RTF1Q92541 IFNA11P-201ENST00000446352 526 ntBASIC3.12□□□□□ -1.91
RTF1Q92541 UQCRBP2-201ENST00000447827 297 ntBASIC3.12□□□□□ -1.91
RTF1Q92541 SEPT14P8-201ENST00000508026 178 ntBASIC3.12□□□□□ -1.91
RTF1Q92541 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC3.12□□□□□ -1.91
RTF1Q92541 RNU6-344P-201ENST00000516635 111 ntBASIC3.12□□□□□ -1.91
RTF1Q92541 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
RTF1Q92541 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.12□□□□□ -1.91
RTF1Q92541 AC012433.1-201ENST00000588916 398 ntBASIC3.12□□□□□ -1.91
RTF1Q92541 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
RTF1Q92541 MIR7157-201ENST00000635801 60 ntBASIC3.12□□□□□ -1.91
RTF1Q92541 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
RTF1Q92541 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RTF1Q92541 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RTF1Q92541 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RTF1Q92541 Y_RNA.570-201ENST00000384750 101 ntBASIC3.11□□□□□ -1.91
RTF1Q92541 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
RTF1Q92541 MIR548H3-201ENST00000408771 118 ntBASIC3.11□□□□□ -1.91
RTF1Q92541 Y_RNA.602-201ENST00000410535 92 ntBASIC3.11□□□□□ -1.91
RTF1Q92541 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.11□□□□□ -1.91
RTF1Q92541 MTND1P19-201ENST00000511780 315 ntBASIC3.11□□□□□ -1.91
RTF1Q92541 RNU6-1338P-201ENST00000516328 91 ntBASIC3.11□□□□□ -1.91
RTF1Q92541 Y_RNA.680-201ENST00000516441 93 ntBASIC3.11□□□□□ -1.91
RTF1Q92541 RNA5SP281-201ENST00000516504 135 ntBASIC3.11□□□□□ -1.91
RTF1Q92541 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.11□□□□□ -1.91
RTF1Q92541 AC004486.1-201ENST00000546846 233 ntBASIC3.11□□□□□ -1.91
RTF1Q92541 MIR3128-201ENST00000581957 66 ntBASIC3.11□□□□□ -1.91
RTF1Q92541 AC011373.1-201ENST00000607270 237 ntBASIC3.11□□□□□ -1.91
RTF1Q92541 AC127459.3-201ENST00000624328 466 ntBASIC3.11□□□□□ -1.91
RTF1Q92541 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.11□□□□□ -1.91
RTF1Q92541 ZNF658B-202ENST00000615961 3375 ntBASIC3.1□□□□□ -1.91
RTF1Q92541 Y_RNA.237-201ENST00000364439 102 ntBASIC3.1□□□□□ -1.91
RTF1Q92541 SNORA68.1-201ENST00000364537 132 ntBASIC3.1□□□□□ -1.91
RTF1Q92541 RNU6-1180P-201ENST00000364935 107 ntBASIC3.1□□□□□ -1.91
RTF1Q92541 RNU6-290P-201ENST00000365212 101 ntBASIC3.1□□□□□ -1.91
RTF1Q92541 SNORA70B-201ENST00000384210 135 ntBASIC3.1□□□□□ -1.91
RTF1Q92541 Y_RNA.541-201ENST00000384640 113 ntBASIC3.1□□□□□ -1.91
RTF1Q92541 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.1□□□□□ -1.91
RTF1Q92541 Z98742.3-201ENST00000418637 326 ntBASIC3.1□□□□□ -1.91
RTF1Q92541 AC027124.2-201ENST00000428249 105 ntBASIC3.1□□□□□ -1.91
RTF1Q92541 AC004386.2-201ENST00000441858 148 ntBASIC3.1□□□□□ -1.91
RTF1Q92541 AC009237.7-201ENST00000447357 229 ntBASIC3.1□□□□□ -1.91
RTF1Q92541 HSPE1P25-201ENST00000455484 251 ntBASIC3.1□□□□□ -1.91
RTF1Q92541 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.1□□□□□ -1.91
RTF1Q92541 RNU6-388P-201ENST00000517012 105 ntBASIC3.1□□□□□ -1.91
RTF1Q92541 RNU6-389P-201ENST00000517048 105 ntBASIC3.1□□□□□ -1.91
RTF1Q92541 RRN3P3-201ENST00000549207 578 ntBASIC3.1□□□□□ -1.91
RTF1Q92541 AC018448.1-201ENST00000552843 316 ntBASIC3.1□□□□□ -1.91
RTF1Q92541 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms