Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.49□□□□□ -1.69
PTCD2Q8WV60 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PTCD2Q8WV60 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
PTCD2Q8WV60 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
PTCD2Q8WV60 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
PTCD2Q8WV60 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PTCD2Q8WV60 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.48□□□□□ -1.69
PTCD2Q8WV60 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PTCD2Q8WV60 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PTCD2Q8WV60 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PTCD2Q8WV60 Y_RNA.267-201ENST00000364679 109 ntBASIC4.48□□□□□ -1.69
PTCD2Q8WV60 RNU6-60P-201ENST00000364792 103 ntBASIC4.48□□□□□ -1.69
PTCD2Q8WV60 RPL23AP48-201ENST00000406913 488 ntBASIC4.48□□□□□ -1.69
PTCD2Q8WV60 MIR1183-201ENST00000408856 89 ntBASIC4.48□□□□□ -1.69
PTCD2Q8WV60 AL139247.1-201ENST00000422768 325 ntBASIC4.48□□□□□ -1.69
PTCD2Q8WV60 RNA5SP112-201ENST00000515937 99 ntBASIC4.48□□□□□ -1.69
PTCD2Q8WV60 RNU6-267P-201ENST00000516714 103 ntBASIC4.48□□□□□ -1.69
PTCD2Q8WV60 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC4.48□□□□□ -1.69
PTCD2Q8WV60 MIR6891-201ENST00000618788 93 ntBASIC4.48□□□□□ -1.69
PTCD2Q8WV60 MIR7154-201ENST00000620673 73 ntBASIC4.48□□□□□ -1.69
PTCD2Q8WV60 MIR203B-201ENST00000636080 86 ntBASIC4.48□□□□□ -1.69
PTCD2Q8WV60 Clostridiales-1.3-201ENST00000637703 147 ntBASIC4.48□□□□□ -1.69
PTCD2Q8WV60 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.48□□□□□ -1.69
PTCD2Q8WV60 MAPK10-372ENST00000641954 3413 ntBASIC4.48□□□□□ -1.69
PTCD2Q8WV60 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PTCD2Q8WV60 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
PTCD2Q8WV60 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
PTCD2Q8WV60 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PTCD2Q8WV60 RNU6-363P-201ENST00000362895 105 ntBASIC4.47□□□□□ -1.69
PTCD2Q8WV60 SNORA62-201ENST00000365493 153 ntBASIC4.47□□□□□ -1.69
PTCD2Q8WV60 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.47□□□□□ -1.69
PTCD2Q8WV60 RN7SL385P-201ENST00000468873 276 ntBASIC4.47□□□□□ -1.69
PTCD2Q8WV60 AC006445.1-201ENST00000491925 405 ntBASIC4.47□□□□□ -1.69
PTCD2Q8WV60 RNU7-25P-201ENST00000516544 62 ntBASIC4.47□□□□□ -1.69
PTCD2Q8WV60 AC069240.1-201ENST00000548774 375 ntBASIC4.47□□□□□ -1.69
PTCD2Q8WV60 MIR548Z-201ENST00000584743 97 ntBASIC4.47□□□□□ -1.69
PTCD2Q8WV60 AL356218.2-201ENST00000605264 187 ntBASIC4.47□□□□□ -1.69
PTCD2Q8WV60 AC087741.2-201ENST00000619415 172 ntBASIC4.47□□□□□ -1.69
PTCD2Q8WV60 AC012442.3-202ENST00000636742 206 ntBASIC4.47□□□□□ -1.69
PTCD2Q8WV60 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PTCD2Q8WV60 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.47□□□□□ -1.69
PTCD2Q8WV60 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.47□□□□□ -1.69
PTCD2Q8WV60 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.47□□□□□ -1.69
PTCD2Q8WV60 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
PTCD2Q8WV60 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
PTCD2Q8WV60 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.69
PTCD2Q8WV60 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
PTCD2Q8WV60 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.46□□□□□ -1.7
PTCD2Q8WV60 RNU6-661P-201ENST00000362409 107 ntBASIC4.46□□□□□ -1.7
PTCD2Q8WV60 SNORD45B-201ENST00000364617 72 ntBASIC4.46□□□□□ -1.7
PTCD2Q8WV60 SNORD115-35-201ENST00000365122 82 ntBASIC4.46□□□□□ -1.7
PTCD2Q8WV60 RNU6-442P-201ENST00000383968 104 ntBASIC4.46□□□□□ -1.7
PTCD2Q8WV60 Y_RNA.440-201ENST00000384120 114 ntBASIC4.46□□□□□ -1.7
PTCD2Q8WV60 MIR93-201ENST00000385024 80 ntBASIC4.46□□□□□ -1.7
PTCD2Q8WV60 FTH1P12-201ENST00000432137 551 ntBASIC4.46□□□□□ -1.7
PTCD2Q8WV60 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.46□□□□□ -1.7
PTCD2Q8WV60 RN7SL812P-201ENST00000493791 279 ntBASIC4.46□□□□□ -1.7
PTCD2Q8WV60 RNU7-99P-201ENST00000516271 62 ntBASIC4.46□□□□□ -1.7
PTCD2Q8WV60 SNORD36C-201ENST00000516733 66 ntBASIC4.46□□□□□ -1.7
PTCD2Q8WV60 RNU6-586P-201ENST00000517265 104 ntBASIC4.46□□□□□ -1.7
PTCD2Q8WV60 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC4.46□□□□□ -1.7
PTCD2Q8WV60 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC4.46□□□□□ -1.7
PTCD2Q8WV60 MIR3618-201ENST00000580330 88 ntBASIC4.46□□□□□ -1.7
PTCD2Q8WV60 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.46□□□□□ -1.7
PTCD2Q8WV60 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.46□□□□□ -1.7
PTCD2Q8WV60 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PTCD2Q8WV60 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
PTCD2Q8WV60 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
PTCD2Q8WV60 AC008264.2-201ENST00000610193 3731 ntBASIC4.46□□□□□ -1.7
PTCD2Q8WV60 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
PTCD2Q8WV60 MFSD8-236ENST00000641509 4050 ntBASIC4.46□□□□□ -1.7
PTCD2Q8WV60 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.46□□□□□ -1.7
PTCD2Q8WV60 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
PTCD2Q8WV60 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PTCD2Q8WV60 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
PTCD2Q8WV60 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
PTCD2Q8WV60 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
PTCD2Q8WV60 RNU1-96P-201ENST00000364163 162 ntBASIC4.45□□□□□ -1.7
PTCD2Q8WV60 AL445646.1-201ENST00000431784 216 ntBASIC4.45□□□□□ -1.7
PTCD2Q8WV60 AC091390.1-201ENST00000433904 331 ntBASIC4.45□□□□□ -1.7
PTCD2Q8WV60 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.45□□□□□ -1.7
PTCD2Q8WV60 RAC1P2-201ENST00000511164 579 ntBASIC4.45□□□□□ -1.7
PTCD2Q8WV60 RNU6ATAC13P-201ENST00000516152 131 ntBASIC4.45□□□□□ -1.7
PTCD2Q8WV60 RNU6-965P-201ENST00000516721 96 ntBASIC4.45□□□□□ -1.7
PTCD2Q8WV60 Y_RNA.705-201ENST00000516862 110 ntBASIC4.45□□□□□ -1.7
PTCD2Q8WV60 AL160290.3-201ENST00000604869 165 ntBASIC4.45□□□□□ -1.7
PTCD2Q8WV60 AC006441.5-201ENST00000612680 209 ntBASIC4.45□□□□□ -1.7
PTCD2Q8WV60 U2.20-201ENST00000613956 192 ntBASIC4.45□□□□□ -1.7
PTCD2Q8WV60 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PTCD2Q8WV60 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
PTCD2Q8WV60 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PTCD2Q8WV60 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
PTCD2Q8WV60 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
PTCD2Q8WV60 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PTCD2Q8WV60 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
PTCD2Q8WV60 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
PTCD2Q8WV60 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
PTCD2Q8WV60 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC4.44□□□□□ -1.7
PTCD2Q8WV60 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC4.44□□□□□ -1.7
PTCD2Q8WV60 SNORD14E-201ENST00000364009 85 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms