Protein–RNA interactions for Protein: Q8NCR9

CLRN3, Clarin-3, humanhuman

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3Q8NCR9 U2.9-201ENST00000615427 191 ntBASIC2.66□□□□□ -1.98
CLRN3Q8NCR9 U2.11-201ENST00000616345 191 ntBASIC2.66□□□□□ -1.98
CLRN3Q8NCR9 U2.2-201ENST00000616535 191 ntBASIC2.66□□□□□ -1.98
CLRN3Q8NCR9 U2.3-201ENST00000617785 191 ntBASIC2.66□□□□□ -1.98
CLRN3Q8NCR9 U2.19-201ENST00000618602 191 ntBASIC2.66□□□□□ -1.98
CLRN3Q8NCR9 RNU2-1-201ENST00000618664 191 ntBASIC2.66□□□□□ -1.98
CLRN3Q8NCR9 U2.6-201ENST00000619225 191 ntBASIC2.66□□□□□ -1.98
CLRN3Q8NCR9 U2.5-201ENST00000619465 191 ntBASIC2.66□□□□□ -1.98
CLRN3Q8NCR9 U2.10-201ENST00000620268 191 ntBASIC2.66□□□□□ -1.98
CLRN3Q8NCR9 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.66□□□□□ -1.98
CLRN3Q8NCR9 RNA5SP196-201ENST00000625967 102 ntBASIC2.66□□□□□ -1.98
CLRN3Q8NCR9 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
CLRN3Q8NCR9 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CLRN3Q8NCR9 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
CLRN3Q8NCR9 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.65□□□□□ -1.98
CLRN3Q8NCR9 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.65□□□□□ -1.98
CLRN3Q8NCR9 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.65□□□□□ -1.98
CLRN3Q8NCR9 Y_RNA.257-201ENST00000364596 102 ntBASIC2.65□□□□□ -1.99
CLRN3Q8NCR9 RNU6-740P-201ENST00000364734 105 ntBASIC2.65□□□□□ -1.99
CLRN3Q8NCR9 Y_RNA.368-201ENST00000365547 113 ntBASIC2.65□□□□□ -1.99
CLRN3Q8NCR9 Y_RNA.456-201ENST00000384232 111 ntBASIC2.65□□□□□ -1.99
CLRN3Q8NCR9 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.65□□□□□ -1.99
CLRN3Q8NCR9 Y_RNA.590-201ENST00000410140 107 ntBASIC2.65□□□□□ -1.99
CLRN3Q8NCR9 HMGN2P35-201ENST00000412164 270 ntBASIC2.65□□□□□ -1.99
CLRN3Q8NCR9 ATP5J2P3-201ENST00000451550 258 ntBASIC2.65□□□□□ -1.99
CLRN3Q8NCR9 RPS27P22-201ENST00000478056 241 ntBASIC2.65□□□□□ -1.99
CLRN3Q8NCR9 RNU6-111P-201ENST00000517179 105 ntBASIC2.65□□□□□ -1.99
CLRN3Q8NCR9 AC027419.1-201ENST00000522976 328 ntBASIC2.65□□□□□ -1.99
CLRN3Q8NCR9 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.65□□□□□ -1.99
CLRN3Q8NCR9 AC090425.1-201ENST00000610007 140 ntBASIC2.65□□□□□ -1.99
CLRN3Q8NCR9 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.65□□□□□ -1.99
CLRN3Q8NCR9 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CLRN3Q8NCR9 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
CLRN3Q8NCR9 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CLRN3Q8NCR9 snoU2-30.2-201ENST00000362805 70 ntBASIC2.64□□□□□ -1.99
CLRN3Q8NCR9 Y_RNA.82-201ENST00000363000 102 ntBASIC2.64□□□□□ -1.99
CLRN3Q8NCR9 Y_RNA.92-201ENST00000363043 102 ntBASIC2.64□□□□□ -1.99
CLRN3Q8NCR9 RNU6-23P-201ENST00000363283 107 ntBASIC2.64□□□□□ -1.99
CLRN3Q8NCR9 Y_RNA.124-201ENST00000363339 93 ntBASIC2.64□□□□□ -1.99
CLRN3Q8NCR9 Y_RNA.217-201ENST00000364214 105 ntBASIC2.64□□□□□ -1.99
CLRN3Q8NCR9 SNORD114-6-201ENST00000364393 72 ntBASIC2.64□□□□□ -1.99
CLRN3Q8NCR9 Y_RNA.235-201ENST00000364412 102 ntBASIC2.64□□□□□ -1.99
CLRN3Q8NCR9 Y_RNA.306-201ENST00000365015 102 ntBASIC2.64□□□□□ -1.99
CLRN3Q8NCR9 Y_RNA.312-201ENST00000365089 102 ntBASIC2.64□□□□□ -1.99
CLRN3Q8NCR9 Y_RNA.322-201ENST00000365151 102 ntBASIC2.64□□□□□ -1.99
CLRN3Q8NCR9 Y_RNA.539-201ENST00000384635 107 ntBASIC2.64□□□□□ -1.99
CLRN3Q8NCR9 HMGN2P34-201ENST00000437647 269 ntBASIC2.64□□□□□ -1.99
CLRN3Q8NCR9 AL109933.2-201ENST00000452651 260 ntBASIC2.64□□□□□ -1.99
CLRN3Q8NCR9 AL139109.1-201ENST00000455491 297 ntBASIC2.64□□□□□ -1.99
CLRN3Q8NCR9 Y_RNA.650-201ENST00000459002 102 ntBASIC2.64□□□□□ -1.99
CLRN3Q8NCR9 Y_RNA.641-201ENST00000459414 105 ntBASIC2.64□□□□□ -1.99
CLRN3Q8NCR9 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.64□□□□□ -1.99
CLRN3Q8NCR9 Y_RNA.679-201ENST00000516416 91 ntBASIC2.64□□□□□ -1.99
CLRN3Q8NCR9 Y_RNA.777-201ENST00000516982 102 ntBASIC2.64□□□□□ -1.99
CLRN3Q8NCR9 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.64□□□□□ -1.99
CLRN3Q8NCR9 AC025884.1-201ENST00000556034 378 ntBASIC2.64□□□□□ -1.99
CLRN3Q8NCR9 Y_RNA.771-201ENST00000598668 102 ntBASIC2.64□□□□□ -1.99
CLRN3Q8NCR9 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.64□□□□□ -1.99
CLRN3Q8NCR9 Y_RNA.789-201ENST00000622480 102 ntBASIC2.64□□□□□ -1.99
CLRN3Q8NCR9 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.64□□□□□ -1.99
CLRN3Q8NCR9 MFSD8-233ENST00000641482 4860 ntBASIC2.63□□□□□ -1.99
CLRN3Q8NCR9 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
CLRN3Q8NCR9 Y_RNA.65-201ENST00000362846 100 ntBASIC2.63□□□□□ -1.99
CLRN3Q8NCR9 SNORD115-3-201ENST00000363100 82 ntBASIC2.63□□□□□ -1.99
CLRN3Q8NCR9 RNA5SP493-201ENST00000364115 91 ntBASIC2.63□□□□□ -1.99
CLRN3Q8NCR9 Y_RNA.341-201ENST00000365341 102 ntBASIC2.63□□□□□ -1.99
CLRN3Q8NCR9 RNU6-1289P-201ENST00000384431 106 ntBASIC2.63□□□□□ -1.99
CLRN3Q8NCR9 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.63□□□□□ -1.99
CLRN3Q8NCR9 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.63□□□□□ -1.99
CLRN3Q8NCR9 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.63□□□□□ -1.99
CLRN3Q8NCR9 CST9LP2-201ENST00000437612 320 ntBASIC2.63□□□□□ -1.99
CLRN3Q8NCR9 FPGT-203ENST00000467578 601 ntTSL 2 BASIC2.63□□□□□ -1.99
CLRN3Q8NCR9 AC136628.3-201ENST00000521868 290 ntBASIC2.63□□□□□ -1.99
CLRN3Q8NCR9 RN7SL600P-201ENST00000581811 299 ntBASIC2.63□□□□□ -1.99
CLRN3Q8NCR9 MIR4438-201ENST00000585271 93 ntBASIC2.63□□□□□ -1.99
CLRN3Q8NCR9 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.63□□□□□ -1.99
CLRN3Q8NCR9 AL078604.3-201ENST00000615580 211 ntBASIC2.63□□□□□ -1.99
CLRN3Q8NCR9 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.63□□□□□ -1.99
CLRN3Q8NCR9 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
CLRN3Q8NCR9 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.62□□□□□ -1.99
CLRN3Q8NCR9 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.62□□□□□ -1.99
CLRN3Q8NCR9 RNU1-58P-201ENST00000362413 163 ntBASIC2.62□□□□□ -1.99
CLRN3Q8NCR9 RNU6-1272P-201ENST00000362776 107 ntBASIC2.62□□□□□ -1.99
CLRN3Q8NCR9 RNU6-1164P-201ENST00000364428 107 ntBASIC2.62□□□□□ -1.99
CLRN3Q8NCR9 RNU6-338P-201ENST00000383888 105 ntBASIC2.62□□□□□ -1.99
CLRN3Q8NCR9 RNU6-662P-201ENST00000384253 104 ntBASIC2.62□□□□□ -1.99
CLRN3Q8NCR9 MIR515-2-201ENST00000384883 83 ntBASIC2.62□□□□□ -1.99
CLRN3Q8NCR9 MIR515-1-201ENST00000384884 83 ntBASIC2.62□□□□□ -1.99
CLRN3Q8NCR9 RNU11-5P-201ENST00000391216 129 ntBASIC2.62□□□□□ -1.99
CLRN3Q8NCR9 AL590004.2-201ENST00000404787 371 ntBASIC2.62□□□□□ -1.99
CLRN3Q8NCR9 RNU6-628P-201ENST00000410675 107 ntBASIC2.62□□□□□ -1.99
CLRN3Q8NCR9 AL356095.1-201ENST00000417217 199 ntBASIC2.62□□□□□ -1.99
CLRN3Q8NCR9 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.62□□□□□ -1.99
CLRN3Q8NCR9 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC2.62□□□□□ -1.99
CLRN3Q8NCR9 AC106707.2-201ENST00000484182 374 ntBASIC2.62□□□□□ -1.99
CLRN3Q8NCR9 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.62□□□□□ -1.99
CLRN3Q8NCR9 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.62□□□□□ -1.99
CLRN3Q8NCR9 RNU6-1278P-201ENST00000516130 107 ntBASIC2.62□□□□□ -1.99
CLRN3Q8NCR9 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.62□□□□□ -1.99
CLRN3Q8NCR9 AC004486.1-201ENST00000546846 233 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms