Protein–RNA interactions for Protein: Q8IWL2

SFTPA1, Pulmonary surfactant-associated protein A1, humanhuman

Predictions only

Length 248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1Q8IWL2 AC103988.1-201ENST00000566382 2177 ntBASIC2.57□□□□□ -2
SFTPA1Q8IWL2 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
SFTPA1Q8IWL2 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SFTPA1Q8IWL2 Y_RNA.60-201ENST00000362831 98 ntBASIC2.57□□□□□ -2
SFTPA1Q8IWL2 SNORD32B-201ENST00000364460 84 ntBASIC2.57□□□□□ -2
SFTPA1Q8IWL2 SNORA72.2-201ENST00000365028 127 ntBASIC2.57□□□□□ -2
SFTPA1Q8IWL2 Y_RNA.570-201ENST00000384750 101 ntBASIC2.57□□□□□ -2
SFTPA1Q8IWL2 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.57□□□□□ -2
SFTPA1Q8IWL2 AC244505.4-201ENST00000434905 287 ntBASIC2.57□□□□□ -2
SFTPA1Q8IWL2 SSXP5-201ENST00000443473 287 ntBASIC2.57□□□□□ -2
SFTPA1Q8IWL2 AC009237.7-201ENST00000447357 229 ntBASIC2.57□□□□□ -2
SFTPA1Q8IWL2 MTND4LP30-201ENST00000454092 297 ntBASIC2.57□□□□□ -2
SFTPA1Q8IWL2 YWHAEP4-201ENST00000505390 198 ntBASIC2.57□□□□□ -2
SFTPA1Q8IWL2 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.57□□□□□ -2
SFTPA1Q8IWL2 AC074133.1-201ENST00000515696 183 ntBASIC2.57□□□□□ -2
SFTPA1Q8IWL2 RNU6-586P-201ENST00000517265 104 ntBASIC2.57□□□□□ -2
SFTPA1Q8IWL2 CYCSP23-201ENST00000519781 313 ntBASIC2.57□□□□□ -2
SFTPA1Q8IWL2 AK6P2-201ENST00000549020 471 ntBASIC2.57□□□□□ -2
SFTPA1Q8IWL2 MIR4423-201ENST00000580922 80 ntBASIC2.57□□□□□ -2
SFTPA1Q8IWL2 AC105245.1-201ENST00000581934 244 ntBASIC2.57□□□□□ -2
SFTPA1Q8IWL2 AC104984.5-201ENST00000586878 94 ntBASIC2.57□□□□□ -2
SFTPA1Q8IWL2 AC005357.1-201ENST00000588399 301 ntBASIC2.57□□□□□ -2
SFTPA1Q8IWL2 AC010900.2-201ENST00000604508 210 ntBASIC2.57□□□□□ -2
SFTPA1Q8IWL2 SNORD113-5-201ENST00000607261 78 ntBASIC2.57□□□□□ -2
SFTPA1Q8IWL2 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.57□□□□□ -2
SFTPA1Q8IWL2 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.57□□□□□ -2
SFTPA1Q8IWL2 CTSLP2-204ENST00000629029 392 ntBASIC2.57□□□□□ -2
SFTPA1Q8IWL2 MIR7157-201ENST00000635801 60 ntBASIC2.57□□□□□ -2
SFTPA1Q8IWL2 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.57□□□□□ -2
SFTPA1Q8IWL2 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.57□□□□□ -2
SFTPA1Q8IWL2 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SFTPA1Q8IWL2 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SFTPA1Q8IWL2 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.57□□□□□ -2
SFTPA1Q8IWL2 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.57□□□□□ -2
SFTPA1Q8IWL2 AC108206.1-201ENST00000570186 4159 ntBASIC2.57□□□□□ -2
SFTPA1Q8IWL2 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.57□□□□□ -2
SFTPA1Q8IWL2 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SFTPA1Q8IWL2 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
SFTPA1Q8IWL2 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.56□□□□□ -2
SFTPA1Q8IWL2 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SFTPA1Q8IWL2 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.56□□□□□ -2
SFTPA1Q8IWL2 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
SFTPA1Q8IWL2 AC010329.5-201ENST00000623497 2174 ntBASIC2.56□□□□□ -2
SFTPA1Q8IWL2 RNA5SP432-201ENST00000362480 116 ntBASIC2.56□□□□□ -2
SFTPA1Q8IWL2 RNU4-90P-201ENST00000362773 141 ntBASIC2.56□□□□□ -2
SFTPA1Q8IWL2 SNORD81.1-201ENST00000363064 77 ntBASIC2.56□□□□□ -2
SFTPA1Q8IWL2 SNORA51.4-201ENST00000364993 124 ntBASIC2.56□□□□□ -2
SFTPA1Q8IWL2 Z98742.3-201ENST00000418637 326 ntBASIC2.56□□□□□ -2
SFTPA1Q8IWL2 MICF-203ENST00000432679 129 ntBASIC2.56□□□□□ -2
SFTPA1Q8IWL2 RPL23AP58-201ENST00000440453 469 ntBASIC2.56□□□□□ -2
SFTPA1Q8IWL2 SEPT14P8-201ENST00000508026 178 ntBASIC2.56□□□□□ -2
SFTPA1Q8IWL2 AC023141.11-201ENST00000508864 202 ntBASIC2.56□□□□□ -2
SFTPA1Q8IWL2 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC2.56□□□□□ -2
SFTPA1Q8IWL2 RNU6-1098P-201ENST00000516772 96 ntBASIC2.56□□□□□ -2
SFTPA1Q8IWL2 RNU6-794P-201ENST00000517261 64 ntBASIC2.56□□□□□ -2
SFTPA1Q8IWL2 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.56□□□□□ -2
SFTPA1Q8IWL2 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.56□□□□□ -2
SFTPA1Q8IWL2 SNORD11B-201ENST00000607707 90 ntBASIC2.56□□□□□ -2
SFTPA1Q8IWL2 AC069294.1-201ENST00000608397 350 ntBASIC2.56□□□□□ -2
SFTPA1Q8IWL2 U4.3-201ENST00000621047 82 ntBASIC2.56□□□□□ -2
SFTPA1Q8IWL2 SNORA50A-202ENST00000629536 136 ntBASIC2.56□□□□□ -2
SFTPA1Q8IWL2 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.56□□□□□ -2
SFTPA1Q8IWL2 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.56□□□□□ -2
SFTPA1Q8IWL2 ZNF658B-202ENST00000615961 3375 ntBASIC2.56□□□□□ -2
SFTPA1Q8IWL2 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.56□□□□□ -2
SFTPA1Q8IWL2 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.56□□□□□ -2
SFTPA1Q8IWL2 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.55□□□□□ -2
SFTPA1Q8IWL2 SNORD27-201ENST00000363981 72 ntBASIC2.55□□□□□ -2
SFTPA1Q8IWL2 RNU6-290P-201ENST00000365212 101 ntBASIC2.55□□□□□ -2
SFTPA1Q8IWL2 Y_RNA.518-201ENST00000384552 113 ntBASIC2.55□□□□□ -2
SFTPA1Q8IWL2 Y_RNA.562-201ENST00000384695 113 ntBASIC2.55□□□□□ -2
SFTPA1Q8IWL2 AL590004.2-201ENST00000404787 371 ntBASIC2.55□□□□□ -2
SFTPA1Q8IWL2 U6atac.2-201ENST00000408644 118 ntBASIC2.55□□□□□ -2
SFTPA1Q8IWL2 RNA5SP504-201ENST00000410676 117 ntBASIC2.55□□□□□ -2
SFTPA1Q8IWL2 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.55□□□□□ -2
SFTPA1Q8IWL2 RPS23P5-201ENST00000495419 428 ntBASIC2.55□□□□□ -2
SFTPA1Q8IWL2 HMGB3P17-201ENST00000504195 649 ntBASIC2.55□□□□□ -2
SFTPA1Q8IWL2 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.55□□□□□ -2
SFTPA1Q8IWL2 RNU6-966P-201ENST00000516479 104 ntBASIC2.55□□□□□ -2
SFTPA1Q8IWL2 RNU5F-4P-201ENST00000516581 114 ntBASIC2.55□□□□□ -2
SFTPA1Q8IWL2 RNU6-344P-201ENST00000516635 111 ntBASIC2.55□□□□□ -2
SFTPA1Q8IWL2 AP002001.1-203ENST00000534002 267 ntBASIC2.55□□□□□ -2
SFTPA1Q8IWL2 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.55□□□□□ -2
SFTPA1Q8IWL2 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.55□□□□□ -2
SFTPA1Q8IWL2 AC004467.1-201ENST00000615678 330 ntBASIC2.55□□□□□ -2
SFTPA1Q8IWL2 AC006001.4-201ENST00000622243 395 ntBASIC2.55□□□□□ -2
SFTPA1Q8IWL2 AC091932.3-201ENST00000624223 323 ntBASIC2.55□□□□□ -2
SFTPA1Q8IWL2 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
SFTPA1Q8IWL2 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.54□□□□□ -2
SFTPA1Q8IWL2 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.54□□□□□ -2
SFTPA1Q8IWL2 Y_RNA.54-201ENST00000362766 105 ntBASIC2.54□□□□□ -2
SFTPA1Q8IWL2 Y_RNA.101-201ENST00000363154 102 ntBASIC2.54□□□□□ -2
SFTPA1Q8IWL2 U8.2-201ENST00000363156 134 ntBASIC2.54□□□□□ -2
SFTPA1Q8IWL2 Y_RNA.230-201ENST00000364348 109 ntBASIC2.54□□□□□ -2
SFTPA1Q8IWL2 SNORA20.1-201ENST00000364790 130 ntBASIC2.54□□□□□ -2
SFTPA1Q8IWL2 Y_RNA.331-201ENST00000365267 102 ntBASIC2.54□□□□□ -2
SFTPA1Q8IWL2 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.54□□□□□ -2
SFTPA1Q8IWL2 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.54□□□□□ -2
SFTPA1Q8IWL2 MIR1294-201ENST00000408503 142 ntBASIC2.54□□□□□ -2
SFTPA1Q8IWL2 RNU4-53P-201ENST00000410828 140 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 175.8 ms