Protein–RNA interactions for Protein: Q86VH5

LRRTM3, Leucine-rich repeat transmembrane neuronal protein 3, humanhuman

Predictions only

Length 581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM3Q86VH5 AC009487.4-201ENST00000624969 3585 ntBASIC3□□□□□ -1.93
LRRTM3Q86VH5 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3□□□□□ -1.93
LRRTM3Q86VH5 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3□□□□□ -1.93
LRRTM3Q86VH5 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.99□□□□□ -1.93
LRRTM3Q86VH5 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
LRRTM3Q86VH5 Y_RNA.331-201ENST00000365267 102 ntBASIC2.99□□□□□ -1.93
LRRTM3Q86VH5 Y_RNA.483-201ENST00000384380 101 ntBASIC2.99□□□□□ -1.93
LRRTM3Q86VH5 RNU4-30P-201ENST00000410245 143 ntBASIC2.99□□□□□ -1.93
LRRTM3Q86VH5 RNU2-48P-201ENST00000410694 191 ntBASIC2.99□□□□□ -1.93
LRRTM3Q86VH5 RNU6-1203P-201ENST00000410703 110 ntBASIC2.99□□□□□ -1.93
LRRTM3Q86VH5 Y_RNA.618-201ENST00000410949 107 ntBASIC2.99□□□□□ -1.93
LRRTM3Q86VH5 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.99□□□□□ -1.93
LRRTM3Q86VH5 AC005042.3-201ENST00000453230 174 ntBASIC2.99□□□□□ -1.93
LRRTM3Q86VH5 RNU7-57P-201ENST00000459540 60 ntBASIC2.99□□□□□ -1.93
LRRTM3Q86VH5 RN7SL75P-201ENST00000461926 281 ntBASIC2.99□□□□□ -1.93
LRRTM3Q86VH5 UBE2DNL-203ENST00000474922 222 ntBASIC2.99□□□□□ -1.93
LRRTM3Q86VH5 AC018868.1-201ENST00000491307 315 ntBASIC2.99□□□□□ -1.93
LRRTM3Q86VH5 AC055872.1-201ENST00000570978 278 ntBASIC2.99□□□□□ -1.93
LRRTM3Q86VH5 AC062037.2-201ENST00000610137 73 ntBASIC2.99□□□□□ -1.93
LRRTM3Q86VH5 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
LRRTM3Q86VH5 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.99□□□□□ -1.93
LRRTM3Q86VH5 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.98□□□□□ -1.93
LRRTM3Q86VH5 AC092593.1-201ENST00000515413 1815 ntBASIC2.98□□□□□ -1.93
LRRTM3Q86VH5 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
LRRTM3Q86VH5 AC093831.2-201ENST00000624393 3427 ntBASIC2.98□□□□□ -1.93
LRRTM3Q86VH5 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.98□□□□□ -1.93
LRRTM3Q86VH5 RNU6-975P-201ENST00000384296 105 ntBASIC2.98□□□□□ -1.93
LRRTM3Q86VH5 RNU6-505P-201ENST00000384427 107 ntBASIC2.98□□□□□ -1.93
LRRTM3Q86VH5 AP002001.1-203ENST00000534002 267 ntBASIC2.98□□□□□ -1.93
LRRTM3Q86VH5 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.98□□□□□ -1.93
LRRTM3Q86VH5 MIR4319-201ENST00000577285 85 ntBASIC2.98□□□□□ -1.93
LRRTM3Q86VH5 MIR4672-201ENST00000583126 81 ntBASIC2.98□□□□□ -1.93
LRRTM3Q86VH5 AC006023.1-201ENST00000603944 259 ntBASIC2.98□□□□□ -1.93
LRRTM3Q86VH5 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.98□□□□□ -1.93
LRRTM3Q86VH5 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.98□□□□□ -1.93
LRRTM3Q86VH5 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
LRRTM3Q86VH5 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.97□□□□□ -1.93
LRRTM3Q86VH5 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
LRRTM3Q86VH5 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
LRRTM3Q86VH5 RNU6-290P-201ENST00000365212 101 ntBASIC2.97□□□□□ -1.93
LRRTM3Q86VH5 MIR1185-2-201ENST00000408687 86 ntBASIC2.97□□□□□ -1.93
LRRTM3Q86VH5 RNU2-54P-201ENST00000410299 190 ntBASIC2.97□□□□□ -1.93
LRRTM3Q86VH5 HSPE1P25-201ENST00000455484 251 ntBASIC2.97□□□□□ -1.93
LRRTM3Q86VH5 RNU7-26P-201ENST00000458980 63 ntBASIC2.97□□□□□ -1.93
LRRTM3Q86VH5 AC093259.1-201ENST00000509755 300 ntBASIC2.97□□□□□ -1.93
LRRTM3Q86VH5 AC107222.1-201ENST00000510899 637 ntBASIC2.97□□□□□ -1.93
LRRTM3Q86VH5 RNU6-991P-201ENST00000516168 107 ntBASIC2.97□□□□□ -1.93
LRRTM3Q86VH5 RNU6-948P-201ENST00000516374 107 ntBASIC2.97□□□□□ -1.93
LRRTM3Q86VH5 PRELID2P1-201ENST00000552837 301 ntBASIC2.97□□□□□ -1.93
LRRTM3Q86VH5 AC006006.1-201ENST00000603082 144 ntBASIC2.97□□□□□ -1.93
LRRTM3Q86VH5 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.97□□□□□ -1.93
LRRTM3Q86VH5 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
LRRTM3Q86VH5 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
LRRTM3Q86VH5 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
LRRTM3Q86VH5 AC135776.4-201ENST00000624300 1904 ntBASIC2.96□□□□□ -1.94
LRRTM3Q86VH5 AC062016.1-201ENST00000355719 319 ntBASIC2.96□□□□□ -1.94
LRRTM3Q86VH5 Y_RNA.101-201ENST00000363154 102 ntBASIC2.96□□□□□ -1.94
LRRTM3Q86VH5 SNORA38-201ENST00000363946 132 ntBASIC2.96□□□□□ -1.94
LRRTM3Q86VH5 Y_RNA.446-201ENST00000384178 104 ntBASIC2.96□□□□□ -1.94
LRRTM3Q86VH5 RNU6-102P-201ENST00000384485 104 ntBASIC2.96□□□□□ -1.94
LRRTM3Q86VH5 MIR592-201ENST00000384959 97 ntBASIC2.96□□□□□ -1.94
LRRTM3Q86VH5 SNORA53-201ENST00000391141 249 ntBASIC2.96□□□□□ -1.94
LRRTM3Q86VH5 AL138827.1-201ENST00000402666 306 ntBASIC2.96□□□□□ -1.94
LRRTM3Q86VH5 RNU2-52P-201ENST00000410680 190 ntBASIC2.96□□□□□ -1.94
LRRTM3Q86VH5 HMGN2P35-201ENST00000412164 270 ntBASIC2.96□□□□□ -1.94
LRRTM3Q86VH5 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.96□□□□□ -1.94
LRRTM3Q86VH5 RNU6-155P-201ENST00000516347 100 ntBASIC2.96□□□□□ -1.94
LRRTM3Q86VH5 RNU2-34P-201ENST00000516534 121 ntBASIC2.96□□□□□ -1.94
LRRTM3Q86VH5 RPPH1-2P-201ENST00000516688 293 ntBASIC2.96□□□□□ -1.94
LRRTM3Q86VH5 NDUFA5P6-201ENST00000542110 379 ntBASIC2.96□□□□□ -1.94
LRRTM3Q86VH5 RPL12P50-201ENST00000603116 116 ntBASIC2.96□□□□□ -1.94
LRRTM3Q86VH5 AC025754.2-201ENST00000606491 432 ntBASIC2.96□□□□□ -1.94
LRRTM3Q86VH5 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.96□□□□□ -1.94
LRRTM3Q86VH5 snoZ196.1-201ENST00000625269 89 ntBASIC2.96□□□□□ -1.94
LRRTM3Q86VH5 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
LRRTM3Q86VH5 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
LRRTM3Q86VH5 AL161431.1-201ENST00000618966 4205 ntBASIC2.95□□□□□ -1.94
LRRTM3Q86VH5 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.95□□□□□ -1.94
LRRTM3Q86VH5 AC010615.1-201ENST00000594254 1764 ntBASIC2.95□□□□□ -1.94
LRRTM3Q86VH5 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
LRRTM3Q86VH5 Y_RNA.332-201ENST00000365271 113 ntBASIC2.95□□□□□ -1.94
LRRTM3Q86VH5 Y_RNA.500-201ENST00000384466 111 ntBASIC2.95□□□□□ -1.94
LRRTM3Q86VH5 Y_RNA.541-201ENST00000384640 113 ntBASIC2.95□□□□□ -1.94
LRRTM3Q86VH5 MIR512-1-201ENST00000384913 84 ntBASIC2.95□□□□□ -1.94
LRRTM3Q86VH5 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.95□□□□□ -1.94
LRRTM3Q86VH5 RN7SKP58-201ENST00000411010 305 ntBASIC2.95□□□□□ -1.94
LRRTM3Q86VH5 SRIP3-201ENST00000413200 219 ntBASIC2.95□□□□□ -1.94
LRRTM3Q86VH5 AC009963.1-201ENST00000417265 157 ntBASIC2.95□□□□□ -1.94
LRRTM3Q86VH5 AC123900.1-201ENST00000420390 96 ntBASIC2.95□□□□□ -1.94
LRRTM3Q86VH5 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.95□□□□□ -1.94
LRRTM3Q86VH5 SNORD127-201ENST00000458892 86 ntBASIC2.95□□□□□ -1.94
LRRTM3Q86VH5 HMGB3P17-201ENST00000504195 649 ntBASIC2.95□□□□□ -1.94
LRRTM3Q86VH5 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.95□□□□□ -1.94
LRRTM3Q86VH5 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.95□□□□□ -1.94
LRRTM3Q86VH5 MIR3684-201ENST00000579779 74 ntBASIC2.95□□□□□ -1.94
LRRTM3Q86VH5 AC037487.3-201ENST00000606668 112 ntBASIC2.95□□□□□ -1.94
LRRTM3Q86VH5 AC090115.4-201ENST00000609970 188 ntBASIC2.95□□□□□ -1.94
LRRTM3Q86VH5 AL590240.4-201ENST00000616908 390 ntBASIC2.95□□□□□ -1.94
LRRTM3Q86VH5 IGHVIII-44-202ENST00000636235 289 ntBASIC2.95□□□□□ -1.94
LRRTM3Q86VH5 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms