Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 AC233702.2-202ENST00000562547 291 ntBASIC2.42□□□□□ -2.02
SYNE3Q6ZMZ3 SNORD14A-201ENST00000606526 91 ntBASIC2.42□□□□□ -2.02
SYNE3Q6ZMZ3 MIR1302-2-201ENST00000607096 138 ntBASIC2.42□□□□□ -2.02
SYNE3Q6ZMZ3 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.42□□□□□ -2.02
SYNE3Q6ZMZ3 AL606534.2-204ENST00000635008 178 ntBASIC2.42□□□□□ -2.02
SYNE3Q6ZMZ3 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.41□□□□□ -2.02
SYNE3Q6ZMZ3 Y_RNA.28-201ENST00000362554 111 ntBASIC2.41□□□□□ -2.02
SYNE3Q6ZMZ3 Y_RNA.148-201ENST00000363557 117 ntBASIC2.41□□□□□ -2.02
SYNE3Q6ZMZ3 Y_RNA.314-201ENST00000365114 102 ntBASIC2.41□□□□□ -2.02
SYNE3Q6ZMZ3 RNU6-793P-201ENST00000384233 104 ntBASIC2.41□□□□□ -2.02
SYNE3Q6ZMZ3 RNU6-318P-201ENST00000384283 103 ntBASIC2.41□□□□□ -2.02
SYNE3Q6ZMZ3 SNORA67.3-201ENST00000384366 140 ntBASIC2.41□□□□□ -2.02
SYNE3Q6ZMZ3 MIR329-1-201ENST00000385028 80 ntBASIC2.41□□□□□ -2.02
SYNE3Q6ZMZ3 MIR586-201ENST00000385035 97 ntBASIC2.41□□□□□ -2.02
SYNE3Q6ZMZ3 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.41□□□□□ -2.02
SYNE3Q6ZMZ3 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.41□□□□□ -2.02
SYNE3Q6ZMZ3 AL021397.1-201ENST00000451806 248 ntBASIC2.41□□□□□ -2.02
SYNE3Q6ZMZ3 NDUFB4P10-201ENST00000452541 359 ntBASIC2.41□□□□□ -2.02
SYNE3Q6ZMZ3 PRELID3BP1-201ENST00000457142 540 ntBASIC2.41□□□□□ -2.02
SYNE3Q6ZMZ3 AC091179.3-201ENST00000474761 144 ntBASIC2.41□□□□□ -2.02
SYNE3Q6ZMZ3 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.41□□□□□ -2.02
SYNE3Q6ZMZ3 SNORA40.14-201ENST00000516543 86 ntBASIC2.41□□□□□ -2.02
SYNE3Q6ZMZ3 RNU5F-4P-201ENST00000516581 114 ntBASIC2.41□□□□□ -2.02
SYNE3Q6ZMZ3 AC091144.1-201ENST00000519573 138 ntBASIC2.41□□□□□ -2.02
SYNE3Q6ZMZ3 AC087441.2-201ENST00000529141 262 ntBASIC2.41□□□□□ -2.02
SYNE3Q6ZMZ3 GNAI2P1-201ENST00000541815 315 ntBASIC2.41□□□□□ -2.02
SYNE3Q6ZMZ3 AL442163.3-201ENST00000554110 156 ntBASIC2.41□□□□□ -2.02
SYNE3Q6ZMZ3 MIR5006-201ENST00000583027 110 ntBASIC2.41□□□□□ -2.02
SYNE3Q6ZMZ3 VN1R91P-201ENST00000594377 169 ntBASIC2.41□□□□□ -2.02
SYNE3Q6ZMZ3 AC092447.9-201ENST00000603395 144 ntBASIC2.41□□□□□ -2.02
SYNE3Q6ZMZ3 SNORD58B-201ENST00000607313 66 ntBASIC2.41□□□□□ -2.02
SYNE3Q6ZMZ3 U2.1-201ENST00000618978 145 ntBASIC2.41□□□□□ -2.02
SYNE3Q6ZMZ3 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.41□□□□□ -2.02
SYNE3Q6ZMZ3 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.41□□□□□ -2.02
SYNE3Q6ZMZ3 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
SYNE3Q6ZMZ3 Y_RNA.39-201ENST00000362620 98 ntBASIC2.4□□□□□ -2.03
SYNE3Q6ZMZ3 Y_RNA.80-201ENST00000362996 102 ntBASIC2.4□□□□□ -2.03
SYNE3Q6ZMZ3 Y_RNA.99-201ENST00000363138 105 ntBASIC2.4□□□□□ -2.03
SYNE3Q6ZMZ3 SNORA3A-201ENST00000364113 130 ntBASIC2.4□□□□□ -2.03
SYNE3Q6ZMZ3 RNU4-52P-201ENST00000384209 138 ntBASIC2.4□□□□□ -2.03
SYNE3Q6ZMZ3 RNU6-1145P-201ENST00000384246 107 ntBASIC2.4□□□□□ -2.03
SYNE3Q6ZMZ3 MIR300-201ENST00000401138 83 ntBASIC2.4□□□□□ -2.03
SYNE3Q6ZMZ3 AL023284.1-201ENST00000403956 276 ntBASIC2.4□□□□□ -2.03
SYNE3Q6ZMZ3 RN7SKP284-201ENST00000411002 343 ntBASIC2.4□□□□□ -2.03
SYNE3Q6ZMZ3 RNU6-1001P-201ENST00000411265 100 ntBASIC2.4□□□□□ -2.03
SYNE3Q6ZMZ3 AC114482.1-201ENST00000418010 247 ntBASIC2.4□□□□□ -2.03
SYNE3Q6ZMZ3 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.4□□□□□ -2.03
SYNE3Q6ZMZ3 HMGN2P18-201ENST00000450680 270 ntBASIC2.4□□□□□ -2.03
SYNE3Q6ZMZ3 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.4□□□□□ -2.03
SYNE3Q6ZMZ3 SNORA25.14-201ENST00000516481 132 ntBASIC2.4□□□□□ -2.03
SYNE3Q6ZMZ3 RN7SKP49-201ENST00000516675 260 ntBASIC2.4□□□□□ -2.03
SYNE3Q6ZMZ3 AC023442.1-201ENST00000531247 422 ntBASIC2.4□□□□□ -2.03
SYNE3Q6ZMZ3 AC093023.1-201ENST00000547375 507 ntBASIC2.4□□□□□ -2.03
SYNE3Q6ZMZ3 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.4□□□□□ -2.03
SYNE3Q6ZMZ3 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.4□□□□□ -2.03
SYNE3Q6ZMZ3 MIR5695-201ENST00000579717 85 ntBASIC2.4□□□□□ -2.03
SYNE3Q6ZMZ3 MIR3945-201ENST00000581853 98 ntBASIC2.4□□□□□ -2.03
SYNE3Q6ZMZ3 AC002984.1-201ENST00000591692 448 ntBASIC2.4□□□□□ -2.03
SYNE3Q6ZMZ3 SNORD11B-201ENST00000607707 90 ntBASIC2.4□□□□□ -2.03
SYNE3Q6ZMZ3 AC010999.1-201ENST00000611856 324 ntBASIC2.4□□□□□ -2.03
SYNE3Q6ZMZ3 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.4□□□□□ -2.03
SYNE3Q6ZMZ3 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
SYNE3Q6ZMZ3 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.03
SYNE3Q6ZMZ3 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
SYNE3Q6ZMZ3 MIR340-201ENST00000362125 95 ntBASIC2.39□□□□□ -2.03
SYNE3Q6ZMZ3 MIR1283-1-201ENST00000408494 87 ntBASIC2.39□□□□□ -2.03
SYNE3Q6ZMZ3 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.39□□□□□ -2.03
SYNE3Q6ZMZ3 EDDM3CP-201ENST00000415977 425 ntBASIC2.39□□□□□ -2.03
SYNE3Q6ZMZ3 AC005534.2-201ENST00000431047 433 ntBASIC2.39□□□□□ -2.03
SYNE3Q6ZMZ3 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.39□□□□□ -2.03
SYNE3Q6ZMZ3 AL137159.1-201ENST00000452808 512 ntBASIC2.39□□□□□ -2.03
SYNE3Q6ZMZ3 HMGN2P9-201ENST00000476875 229 ntBASIC2.39□□□□□ -2.03
SYNE3Q6ZMZ3 AC093852.1-201ENST00000503587 266 ntBASIC2.39□□□□□ -2.03
SYNE3Q6ZMZ3 RNA5SP490-201ENST00000517141 136 ntBASIC2.39□□□□□ -2.03
SYNE3Q6ZMZ3 CYCSP23-201ENST00000519781 313 ntBASIC2.39□□□□□ -2.03
SYNE3Q6ZMZ3 IGKV3-31-201ENST00000523109 329 ntBASIC2.39□□□□□ -2.03
SYNE3Q6ZMZ3 MIR4648-201ENST00000580107 72 ntBASIC2.39□□□□□ -2.03
SYNE3Q6ZMZ3 MIR3171-201ENST00000584270 74 ntBASIC2.39□□□□□ -2.03
SYNE3Q6ZMZ3 AL356055.1-201ENST00000602528 446 ntBASIC2.39□□□□□ -2.03
SYNE3Q6ZMZ3 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.39□□□□□ -2.03
SYNE3Q6ZMZ3 AC005296.1-201ENST00000616145 209 ntBASIC2.39□□□□□ -2.03
SYNE3Q6ZMZ3 AC009487.4-201ENST00000624969 3585 ntBASIC2.39□□□□□ -2.03
SYNE3Q6ZMZ3 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
SYNE3Q6ZMZ3 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.38□□□□□ -2.03
SYNE3Q6ZMZ3 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SYNE3Q6ZMZ3 RNA5SP160-201ENST00000364866 120 ntBASIC2.38□□□□□ -2.03
SYNE3Q6ZMZ3 SNORA70B-201ENST00000384210 135 ntBASIC2.38□□□□□ -2.03
SYNE3Q6ZMZ3 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
SYNE3Q6ZMZ3 AL356379.1-201ENST00000414105 126 ntBASIC2.38□□□□□ -2.03
SYNE3Q6ZMZ3 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.38□□□□□ -2.03
SYNE3Q6ZMZ3 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.38□□□□□ -2.03
SYNE3Q6ZMZ3 RPL23AP7-203ENST00000449021 469 ntBASIC2.38□□□□□ -2.03
SYNE3Q6ZMZ3 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.38□□□□□ -2.03
SYNE3Q6ZMZ3 RNU6-717P-201ENST00000459076 104 ntBASIC2.38□□□□□ -2.03
SYNE3Q6ZMZ3 RNU7-14P-201ENST00000459331 62 ntBASIC2.38□□□□□ -2.03
SYNE3Q6ZMZ3 RNU7-87P-201ENST00000459343 62 ntBASIC2.38□□□□□ -2.03
SYNE3Q6ZMZ3 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.38□□□□□ -2.03
SYNE3Q6ZMZ3 SNORA4.4-201ENST00000515921 135 ntBASIC2.38□□□□□ -2.03
SYNE3Q6ZMZ3 Y_RNA.661-201ENST00000516003 99 ntBASIC2.38□□□□□ -2.03
SYNE3Q6ZMZ3 Y_RNA.683-201ENST00000516508 93 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms