Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 RNU6-546P-201ENST00000383991 107 ntBASIC3.36□□□□□ -1.87
SNAP47Q5SQN1 Y_RNA.571-201ENST00000384753 98 ntBASIC3.36□□□□□ -1.87
SNAP47Q5SQN1 MIR95-201ENST00000385072 81 ntBASIC3.36□□□□□ -1.87
SNAP47Q5SQN1 MIR1289-1-201ENST00000408836 144 ntBASIC3.36□□□□□ -1.87
SNAP47Q5SQN1 RNU6-57P-201ENST00000411348 103 ntBASIC3.36□□□□□ -1.87
SNAP47Q5SQN1 AL451074.5-201ENST00000415894 435 ntBASIC3.36□□□□□ -1.87
SNAP47Q5SQN1 AL161788.1-201ENST00000441805 169 ntBASIC3.36□□□□□ -1.87
SNAP47Q5SQN1 RPL23AP7-203ENST00000449021 469 ntBASIC3.36□□□□□ -1.87
SNAP47Q5SQN1 CYP2C59P-201ENST00000457790 269 ntBASIC3.36□□□□□ -1.87
SNAP47Q5SQN1 CENPBD1P1-201ENST00000464061 469 ntBASIC3.36□□□□□ -1.87
SNAP47Q5SQN1 RNU6-1278P-201ENST00000516130 107 ntBASIC3.36□□□□□ -1.87
SNAP47Q5SQN1 AC022616.8-201ENST00000533569 253 ntBASIC3.36□□□□□ -1.87
SNAP47Q5SQN1 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.36□□□□□ -1.87
SNAP47Q5SQN1 AL513302.2-201ENST00000562313 1842 ntBASIC3.35□□□□□ -1.87
SNAP47Q5SQN1 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
SNAP47Q5SQN1 SNORA20B-201ENST00000384220 132 ntBASIC3.35□□□□□ -1.87
SNAP47Q5SQN1 MTCO2P33-201ENST00000402100 465 ntBASIC3.35□□□□□ -1.87
SNAP47Q5SQN1 RNA5SP120-201ENST00000410900 112 ntBASIC3.35□□□□□ -1.87
SNAP47Q5SQN1 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.35□□□□□ -1.87
SNAP47Q5SQN1 AL121890.1-201ENST00000435457 205 ntBASIC3.35□□□□□ -1.87
SNAP47Q5SQN1 AL392103.1-201ENST00000447000 198 ntBASIC3.35□□□□□ -1.87
SNAP47Q5SQN1 CKS1BP2-201ENST00000497342 240 ntBASIC3.35□□□□□ -1.87
SNAP47Q5SQN1 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.35□□□□□ -1.87
SNAP47Q5SQN1 Y_RNA.703-201ENST00000516846 111 ntBASIC3.35□□□□□ -1.87
SNAP47Q5SQN1 MIR3651-201ENST00000630427 90 ntBASIC3.35□□□□□ -1.87
SNAP47Q5SQN1 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.35□□□□□ -1.87
SNAP47Q5SQN1 AC110774.1-201ENST00000623567 2018 ntBASIC3.35□□□□□ -1.87
SNAP47Q5SQN1 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
SNAP47Q5SQN1 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.35□□□□□ -1.87
SNAP47Q5SQN1 AC068700.1-201ENST00000565862 3754 ntBASIC3.35□□□□□ -1.87
SNAP47Q5SQN1 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
SNAP47Q5SQN1 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SNAP47Q5SQN1 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
SNAP47Q5SQN1 Y_RNA.7-201ENST00000362352 102 ntBASIC3.34□□□□□ -1.87
SNAP47Q5SQN1 RNU1-23P-201ENST00000363361 144 ntBASIC3.34□□□□□ -1.87
SNAP47Q5SQN1 RNU6-899P-201ENST00000363947 107 ntBASIC3.34□□□□□ -1.87
SNAP47Q5SQN1 RNU6-438P-201ENST00000365561 103 ntBASIC3.34□□□□□ -1.87
SNAP47Q5SQN1 AL355497.1-201ENST00000406262 551 ntBASIC3.34□□□□□ -1.87
SNAP47Q5SQN1 AC006989.1-201ENST00000427212 131 ntBASIC3.34□□□□□ -1.87
SNAP47Q5SQN1 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.34□□□□□ -1.87
SNAP47Q5SQN1 HMGN2P18-201ENST00000450680 270 ntBASIC3.34□□□□□ -1.87
SNAP47Q5SQN1 RPS4XP2-201ENST00000458402 793 ntBASIC3.34□□□□□ -1.87
SNAP47Q5SQN1 AC091021.1-201ENST00000468051 388 ntBASIC3.34□□□□□ -1.87
SNAP47Q5SQN1 RN7SL442P-201ENST00000473804 320 ntBASIC3.34□□□□□ -1.87
SNAP47Q5SQN1 AC092185.1-201ENST00000491371 97 ntBASIC3.34□□□□□ -1.87
SNAP47Q5SQN1 RNU6-948P-201ENST00000516374 107 ntBASIC3.34□□□□□ -1.87
SNAP47Q5SQN1 SNORA48.11-201ENST00000517015 89 ntBASIC3.34□□□□□ -1.87
SNAP47Q5SQN1 IGKV2-26-201ENST00000518305 343 ntBASIC3.34□□□□□ -1.87
SNAP47Q5SQN1 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.34□□□□□ -1.87
SNAP47Q5SQN1 MIR3133-201ENST00000583157 78 ntBASIC3.34□□□□□ -1.87
SNAP47Q5SQN1 AC021753.1-201ENST00000635724 168 ntBASIC3.34□□□□□ -1.87
SNAP47Q5SQN1 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
SNAP47Q5SQN1 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
SNAP47Q5SQN1 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.88
SNAP47Q5SQN1 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
SNAP47Q5SQN1 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
SNAP47Q5SQN1 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.88
SNAP47Q5SQN1 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
SNAP47Q5SQN1 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
SNAP47Q5SQN1 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC3.33□□□□□ -1.88
SNAP47Q5SQN1 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
SNAP47Q5SQN1 AL159152.1-201ENST00000635019 2587 ntBASIC3.33□□□□□ -1.88
SNAP47Q5SQN1 SNORA27.1-201ENST00000362604 124 ntBASIC3.33□□□□□ -1.88
SNAP47Q5SQN1 SNORA38.1-201ENST00000364172 131 ntBASIC3.33□□□□□ -1.88
SNAP47Q5SQN1 Y_RNA.238-201ENST00000364441 102 ntBASIC3.33□□□□□ -1.88
SNAP47Q5SQN1 Y_RNA.506-201ENST00000384494 102 ntBASIC3.33□□□□□ -1.88
SNAP47Q5SQN1 RNU6-1235P-201ENST00000384559 107 ntBASIC3.33□□□□□ -1.88
SNAP47Q5SQN1 SNORA48.8-201ENST00000391324 134 ntBASIC3.33□□□□□ -1.88
SNAP47Q5SQN1 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.33□□□□□ -1.88
SNAP47Q5SQN1 TRIAP1P1-201ENST00000427062 225 ntBASIC3.33□□□□□ -1.88
SNAP47Q5SQN1 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.33□□□□□ -1.88
SNAP47Q5SQN1 SNORD65B-201ENST00000459126 73 ntBASIC3.33□□□□□ -1.88
SNAP47Q5SQN1 RNU6-498P-201ENST00000459468 107 ntBASIC3.33□□□□□ -1.88
SNAP47Q5SQN1 RPS27P29-201ENST00000463110 252 ntBASIC3.33□□□□□ -1.88
SNAP47Q5SQN1 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.33□□□□□ -1.88
SNAP47Q5SQN1 RNA5SP490-201ENST00000517141 136 ntBASIC3.33□□□□□ -1.88
SNAP47Q5SQN1 RN7SKP57-201ENST00000517248 293 ntBASIC3.33□□□□□ -1.88
SNAP47Q5SQN1 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.33□□□□□ -1.88
SNAP47Q5SQN1 AL356280.1-201ENST00000603614 379 ntBASIC3.33□□□□□ -1.88
SNAP47Q5SQN1 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SNAP47Q5SQN1 AC009487.4-201ENST00000624969 3585 ntBASIC3.32□□□□□ -1.88
SNAP47Q5SQN1 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.32□□□□□ -1.88
SNAP47Q5SQN1 Y_RNA.170-201ENST00000363746 110 ntBASIC3.32□□□□□ -1.88
SNAP47Q5SQN1 RNU6-271P-201ENST00000363858 105 ntBASIC3.32□□□□□ -1.88
SNAP47Q5SQN1 Y_RNA.293-201ENST00000364908 93 ntBASIC3.32□□□□□ -1.88
SNAP47Q5SQN1 RNA5SP240-201ENST00000365355 128 ntBASIC3.32□□□□□ -1.88
SNAP47Q5SQN1 RNU6-418P-201ENST00000384035 107 ntBASIC3.32□□□□□ -1.88
SNAP47Q5SQN1 RNU6-125P-201ENST00000384505 107 ntBASIC3.32□□□□□ -1.88
SNAP47Q5SQN1 RNU6-381P-201ENST00000391259 108 ntBASIC3.32□□□□□ -1.88
SNAP47Q5SQN1 RNU2-2P-201ENST00000410396 191 ntBASIC3.32□□□□□ -1.88
SNAP47Q5SQN1 AC005326.1-201ENST00000429197 123 ntBASIC3.32□□□□□ -1.88
SNAP47Q5SQN1 HSPE1P13-201ENST00000451143 297 ntBASIC3.32□□□□□ -1.88
SNAP47Q5SQN1 RNU7-141P-201ENST00000459304 62 ntBASIC3.32□□□□□ -1.88
SNAP47Q5SQN1 AC010401.1-201ENST00000463867 348 ntBASIC3.32□□□□□ -1.88
SNAP47Q5SQN1 AC010598.1-201ENST00000510378 103 ntBASIC3.32□□□□□ -1.88
SNAP47Q5SQN1 RNU6-406P-201ENST00000516470 107 ntBASIC3.32□□□□□ -1.88
SNAP47Q5SQN1 PRELID2P1-201ENST00000552837 301 ntBASIC3.32□□□□□ -1.88
SNAP47Q5SQN1 RNU2-4P-201ENST00000606190 192 ntBASIC3.32□□□□□ -1.88
SNAP47Q5SQN1 U2.15-201ENST00000611544 191 ntBASIC3.32□□□□□ -1.88
SNAP47Q5SQN1 U2.16-201ENST00000613119 191 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 131 ms