Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 U2.12-201ENST00000613778 191 ntBASIC2.2□□□□□ -2.06
USP41Q3LFD5 U2.20-201ENST00000613956 192 ntBASIC2.2□□□□□ -2.06
USP41Q3LFD5 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.2□□□□□ -2.06
USP41Q3LFD5 U2.9-201ENST00000615427 191 ntBASIC2.2□□□□□ -2.06
USP41Q3LFD5 U2.11-201ENST00000616345 191 ntBASIC2.2□□□□□ -2.06
USP41Q3LFD5 U2.2-201ENST00000616535 191 ntBASIC2.2□□□□□ -2.06
USP41Q3LFD5 AC087588.2-201ENST00000617667 426 ntBASIC2.2□□□□□ -2.06
USP41Q3LFD5 U2.3-201ENST00000617785 191 ntBASIC2.2□□□□□ -2.06
USP41Q3LFD5 U2.19-201ENST00000618602 191 ntBASIC2.2□□□□□ -2.06
USP41Q3LFD5 RNU2-1-201ENST00000618664 191 ntBASIC2.2□□□□□ -2.06
USP41Q3LFD5 U2.6-201ENST00000619225 191 ntBASIC2.2□□□□□ -2.06
USP41Q3LFD5 U2.5-201ENST00000619465 191 ntBASIC2.2□□□□□ -2.06
USP41Q3LFD5 U2.10-201ENST00000620268 191 ntBASIC2.2□□□□□ -2.06
USP41Q3LFD5 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.2□□□□□ -2.06
USP41Q3LFD5 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.2□□□□□ -2.06
USP41Q3LFD5 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
USP41Q3LFD5 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
USP41Q3LFD5 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
USP41Q3LFD5 AL596028.1-201ENST00000326971 197 ntBASIC2.19□□□□□ -2.06
USP41Q3LFD5 RNU6-545P-201ENST00000362681 104 ntBASIC2.19□□□□□ -2.06
USP41Q3LFD5 RNU6-879P-201ENST00000364328 108 ntBASIC2.19□□□□□ -2.06
USP41Q3LFD5 Y_RNA.394-201ENST00000383942 103 ntBASIC2.19□□□□□ -2.06
USP41Q3LFD5 RNU1-139P-201ENST00000391307 165 ntBASIC2.19□□□□□ -2.06
USP41Q3LFD5 AC019129.1-201ENST00000403786 261 ntBASIC2.19□□□□□ -2.06
USP41Q3LFD5 AC096644.2-201ENST00000429278 159 ntBASIC2.19□□□□□ -2.06
USP41Q3LFD5 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.19□□□□□ -2.06
USP41Q3LFD5 RNU6-976P-201ENST00000516086 111 ntBASIC2.19□□□□□ -2.06
USP41Q3LFD5 RNU6-295P-201ENST00000516901 104 ntBASIC2.19□□□□□ -2.06
USP41Q3LFD5 RNU1-117P-201ENST00000517041 158 ntBASIC2.19□□□□□ -2.06
USP41Q3LFD5 RNU6-548P-201ENST00000517083 115 ntBASIC2.19□□□□□ -2.06
USP41Q3LFD5 AC144568.1-201ENST00000520139 137 ntBASIC2.19□□□□□ -2.06
USP41Q3LFD5 MIR6840-201ENST00000611937 71 ntBASIC2.19□□□□□ -2.06
USP41Q3LFD5 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.19□□□□□ -2.06
USP41Q3LFD5 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.19□□□□□ -2.06
USP41Q3LFD5 AC131280.1-202ENST00000624067 4211 ntBASIC2.18□□□□□ -2.06
USP41Q3LFD5 RNU6-727P-201ENST00000363592 107 ntBASIC2.18□□□□□ -2.06
USP41Q3LFD5 RNU5F-3P-201ENST00000363767 117 ntBASIC2.18□□□□□ -2.06
USP41Q3LFD5 SNORD31B-201ENST00000364977 69 ntBASIC2.18□□□□□ -2.06
USP41Q3LFD5 SNORA6-201ENST00000384033 151 ntBASIC2.18□□□□□ -2.06
USP41Q3LFD5 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.18□□□□□ -2.06
USP41Q3LFD5 AL033519.2-201ENST00000403958 392 ntBASIC2.18□□□□□ -2.06
USP41Q3LFD5 MIR1262-201ENST00000408276 93 ntBASIC2.18□□□□□ -2.06
USP41Q3LFD5 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.18□□□□□ -2.06
USP41Q3LFD5 SRIP3-201ENST00000413200 219 ntBASIC2.18□□□□□ -2.06
USP41Q3LFD5 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.18□□□□□ -2.06
USP41Q3LFD5 EIF1P2-201ENST00000428233 350 ntBASIC2.18□□□□□ -2.06
USP41Q3LFD5 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.18□□□□□ -2.06
USP41Q3LFD5 RNU6-717P-201ENST00000459076 104 ntBASIC2.18□□□□□ -2.06
USP41Q3LFD5 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.18□□□□□ -2.06
USP41Q3LFD5 AC093023.1-201ENST00000547375 507 ntBASIC2.18□□□□□ -2.06
USP41Q3LFD5 RRN3P3-201ENST00000549207 578 ntBASIC2.18□□□□□ -2.06
USP41Q3LFD5 MIR4448-201ENST00000584360 86 ntBASIC2.18□□□□□ -2.06
USP41Q3LFD5 Y_RNA.783-201ENST00000613546 102 ntBASIC2.18□□□□□ -2.06
USP41Q3LFD5 ZNF72P-201ENST00000425869 1908 ntBASIC2.18□□□□□ -2.06
USP41Q3LFD5 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.18□□□□□ -2.06
USP41Q3LFD5 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
USP41Q3LFD5 Y_RNA.5-201ENST00000362334 102 ntBASIC2.17□□□□□ -2.06
USP41Q3LFD5 Y_RNA.11-201ENST00000362375 109 ntBASIC2.17□□□□□ -2.06
USP41Q3LFD5 Y_RNA.179-201ENST00000363844 90 ntBASIC2.17□□□□□ -2.06
USP41Q3LFD5 RNU6-1305P-201ENST00000364353 104 ntBASIC2.17□□□□□ -2.06
USP41Q3LFD5 RNU6-281P-201ENST00000384212 103 ntBASIC2.17□□□□□ -2.06
USP41Q3LFD5 RNU6-793P-201ENST00000384233 104 ntBASIC2.17□□□□□ -2.06
USP41Q3LFD5 Y_RNA.496-201ENST00000384444 101 ntBASIC2.17□□□□□ -2.06
USP41Q3LFD5 SNORA26.9-201ENST00000391322 122 ntBASIC2.17□□□□□ -2.06
USP41Q3LFD5 Y_RNA.592-201ENST00000410274 109 ntBASIC2.17□□□□□ -2.06
USP41Q3LFD5 RNA5SP270-201ENST00000411361 118 ntBASIC2.17□□□□□ -2.06
USP41Q3LFD5 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.17□□□□□ -2.06
USP41Q3LFD5 UBE2V1P7-201ENST00000446395 340 ntBASIC2.17□□□□□ -2.06
USP41Q3LFD5 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.17□□□□□ -2.06
USP41Q3LFD5 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.17□□□□□ -2.06
USP41Q3LFD5 HMGN2P23-201ENST00000456759 269 ntBASIC2.17□□□□□ -2.06
USP41Q3LFD5 AC091179.3-201ENST00000474761 144 ntBASIC2.17□□□□□ -2.06
USP41Q3LFD5 MIR4753-201ENST00000585119 83 ntBASIC2.17□□□□□ -2.06
USP41Q3LFD5 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.17□□□□□ -2.06
USP41Q3LFD5 AC010999.1-201ENST00000611856 324 ntBASIC2.17□□□□□ -2.06
USP41Q3LFD5 AL353997.5-201ENST00000618886 171 ntBASIC2.17□□□□□ -2.06
USP41Q3LFD5 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC2.17□□□□□ -2.06
USP41Q3LFD5 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.17□□□□□ -2.06
USP41Q3LFD5 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.16□□□□□ -2.06
USP41Q3LFD5 RNU1-62P-201ENST00000362599 164 ntBASIC2.16□□□□□ -2.06
USP41Q3LFD5 RNU4-42P-201ENST00000364738 142 ntBASIC2.16□□□□□ -2.06
USP41Q3LFD5 Y_RNA.445-201ENST00000384168 102 ntBASIC2.16□□□□□ -2.06
USP41Q3LFD5 SNORD14D-201ENST00000384390 87 ntBASIC2.16□□□□□ -2.06
USP41Q3LFD5 MIR583-201ENST00000384846 75 ntBASIC2.16□□□□□ -2.06
USP41Q3LFD5 RNU6-308P-201ENST00000390957 107 ntBASIC2.16□□□□□ -2.06
USP41Q3LFD5 MIR300-201ENST00000401138 83 ntBASIC2.16□□□□□ -2.06
USP41Q3LFD5 RNU6-1001P-201ENST00000411265 100 ntBASIC2.16□□□□□ -2.06
USP41Q3LFD5 AL139156.1-201ENST00000412785 841 ntBASIC2.16□□□□□ -2.06
USP41Q3LFD5 MTCO2P12-201ENST00000427426 682 ntBASIC2.16□□□□□ -2.06
USP41Q3LFD5 AC007677.1-201ENST00000445757 515 ntBASIC2.16□□□□□ -2.06
USP41Q3LFD5 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.16□□□□□ -2.06
USP41Q3LFD5 RNA5SP182-201ENST00000516064 82 ntBASIC2.16□□□□□ -2.06
USP41Q3LFD5 RNU6-344P-201ENST00000516635 111 ntBASIC2.16□□□□□ -2.06
USP41Q3LFD5 RNU7-193P-201ENST00000516723 65 ntBASIC2.16□□□□□ -2.06
USP41Q3LFD5 RNA5SP137-201ENST00000516833 135 ntBASIC2.16□□□□□ -2.06
USP41Q3LFD5 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.16□□□□□ -2.06
USP41Q3LFD5 AC125232.2-201ENST00000592457 143 ntBASIC2.16□□□□□ -2.06
USP41Q3LFD5 AC092447.9-201ENST00000603395 144 ntBASIC2.16□□□□□ -2.06
USP41Q3LFD5 SNORD11B-201ENST00000607707 90 ntBASIC2.16□□□□□ -2.06
USP41Q3LFD5 uc_338.22-201ENST00000622722 187 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 177 ms