Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 AL078596.1-201ENST00000624856 447 ntBASIC2.17□□□□□ -2.06
EFNB3Q15768 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
EFNB3Q15768 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.17□□□□□ -2.06
EFNB3Q15768 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
EFNB3Q15768 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
EFNB3Q15768 Y_RNA.153-201ENST00000363615 91 ntBASIC2.16□□□□□ -2.06
EFNB3Q15768 Y_RNA.276-201ENST00000364732 109 ntBASIC2.16□□□□□ -2.06
EFNB3Q15768 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
EFNB3Q15768 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC2.16□□□□□ -2.06
EFNB3Q15768 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.16□□□□□ -2.06
EFNB3Q15768 DPH3P2-201ENST00000422618 250 ntBASIC2.16□□□□□ -2.06
EFNB3Q15768 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.16□□□□□ -2.06
EFNB3Q15768 AC074290.1-201ENST00000448883 135 ntBASIC2.16□□□□□ -2.06
EFNB3Q15768 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.16□□□□□ -2.06
EFNB3Q15768 NDUFB4P10-201ENST00000452541 359 ntBASIC2.16□□□□□ -2.06
EFNB3Q15768 AC114982.1-201ENST00000469402 321 ntBASIC2.16□□□□□ -2.06
EFNB3Q15768 ATP5EP1-201ENST00000510257 156 ntBASIC2.16□□□□□ -2.06
EFNB3Q15768 HMGB3P3-201ENST00000510526 400 ntBASIC2.16□□□□□ -2.06
EFNB3Q15768 RNA5SP82-201ENST00000516707 92 ntBASIC2.16□□□□□ -2.06
EFNB3Q15768 RNU1-117P-201ENST00000517041 158 ntBASIC2.16□□□□□ -2.06
EFNB3Q15768 RNA5SP490-201ENST00000517141 136 ntBASIC2.16□□□□□ -2.06
EFNB3Q15768 RNU6-667P-201ENST00000517186 102 ntBASIC2.16□□□□□ -2.06
EFNB3Q15768 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.16□□□□□ -2.06
EFNB3Q15768 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.16□□□□□ -2.06
EFNB3Q15768 MIR4753-201ENST00000585119 83 ntBASIC2.16□□□□□ -2.06
EFNB3Q15768 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.16□□□□□ -2.06
EFNB3Q15768 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.16□□□□□ -2.06
EFNB3Q15768 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
EFNB3Q15768 U3.8-201ENST00000363675 217 ntBASIC2.15□□□□□ -2.07
EFNB3Q15768 RNU6-438P-201ENST00000365561 103 ntBASIC2.15□□□□□ -2.07
EFNB3Q15768 Y_RNA.415-201ENST00000384012 112 ntBASIC2.15□□□□□ -2.07
EFNB3Q15768 RNU6-926P-201ENST00000384075 107 ntBASIC2.15□□□□□ -2.07
EFNB3Q15768 Y_RNA.439-201ENST00000384119 94 ntBASIC2.15□□□□□ -2.07
EFNB3Q15768 SNORA67.2-201ENST00000384300 149 ntBASIC2.15□□□□□ -2.07
EFNB3Q15768 MIR1283-1-201ENST00000408494 87 ntBASIC2.15□□□□□ -2.07
EFNB3Q15768 RNA5SP504-201ENST00000410676 117 ntBASIC2.15□□□□□ -2.07
EFNB3Q15768 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.15□□□□□ -2.07
EFNB3Q15768 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.15□□□□□ -2.07
EFNB3Q15768 HMGN2P18-201ENST00000450680 270 ntBASIC2.15□□□□□ -2.07
EFNB3Q15768 AC016925.1-201ENST00000458303 298 ntBASIC2.15□□□□□ -2.07
EFNB3Q15768 SRIP1-201ENST00000489235 288 ntBASIC2.15□□□□□ -2.07
EFNB3Q15768 AC131281.1-201ENST00000522984 164 ntBASIC2.15□□□□□ -2.07
EFNB3Q15768 NDUFA5P6-201ENST00000542110 379 ntBASIC2.15□□□□□ -2.07
EFNB3Q15768 AC018448.1-201ENST00000552843 316 ntBASIC2.15□□□□□ -2.07
EFNB3Q15768 AL162730.1-201ENST00000605734 292 ntBASIC2.15□□□□□ -2.07
EFNB3Q15768 AL357075.2-201ENST00000614906 189 ntBASIC2.15□□□□□ -2.07
EFNB3Q15768 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
EFNB3Q15768 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
EFNB3Q15768 RNA5SP456-201ENST00000364002 114 ntBASIC2.14□□□□□ -2.07
EFNB3Q15768 RNA5SP126-201ENST00000365092 109 ntBASIC2.14□□□□□ -2.07
EFNB3Q15768 RNU6-301P-201ENST00000384277 107 ntBASIC2.14□□□□□ -2.07
EFNB3Q15768 MIR518C-201ENST00000384822 101 ntBASIC2.14□□□□□ -2.07
EFNB3Q15768 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.14□□□□□ -2.07
EFNB3Q15768 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.14□□□□□ -2.07
EFNB3Q15768 AL137159.1-201ENST00000452808 512 ntBASIC2.14□□□□□ -2.07
EFNB3Q15768 RNU6-625P-201ENST00000459412 107 ntBASIC2.14□□□□□ -2.07
EFNB3Q15768 AC010655.3-201ENST00000478818 450 ntBASIC2.14□□□□□ -2.07
EFNB3Q15768 RPL26P26-201ENST00000480251 434 ntBASIC2.14□□□□□ -2.07
EFNB3Q15768 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.14□□□□□ -2.07
EFNB3Q15768 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.14□□□□□ -2.07
EFNB3Q15768 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.14□□□□□ -2.07
EFNB3Q15768 MYL12BP1-201ENST00000569826 507 ntBASIC2.14□□□□□ -2.07
EFNB3Q15768 RAC1P9-201ENST00000604990 392 ntBASIC2.14□□□□□ -2.07
EFNB3Q15768 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.14□□□□□ -2.07
EFNB3Q15768 AC245884.12-201ENST00000615364 59 ntBASIC2.14□□□□□ -2.07
EFNB3Q15768 AC011476.5-201ENST00000615594 130 ntBASIC2.14□□□□□ -2.07
EFNB3Q15768 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.14□□□□□ -2.07
EFNB3Q15768 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
EFNB3Q15768 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
EFNB3Q15768 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
EFNB3Q15768 AC009487.4-201ENST00000624969 3585 ntBASIC2.14□□□□□ -2.07
EFNB3Q15768 AC080100.1-201ENST00000624239 5356 ntBASIC2.13□□□□□ -2.07
EFNB3Q15768 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.13□□□□□ -2.07
EFNB3Q15768 RNU6-545P-201ENST00000362681 104 ntBASIC2.13□□□□□ -2.07
EFNB3Q15768 Y_RNA.183-201ENST00000363882 113 ntBASIC2.13□□□□□ -2.07
EFNB3Q15768 SNORA25.6-201ENST00000364121 118 ntBASIC2.13□□□□□ -2.07
EFNB3Q15768 RNU6-743P-201ENST00000364151 106 ntBASIC2.13□□□□□ -2.07
EFNB3Q15768 Y_RNA.210-201ENST00000364161 110 ntBASIC2.13□□□□□ -2.07
EFNB3Q15768 RNU6-1305P-201ENST00000364353 104 ntBASIC2.13□□□□□ -2.07
EFNB3Q15768 DEFA7P-201ENST00000382676 285 ntBASIC2.13□□□□□ -2.07
EFNB3Q15768 RNU6-1264P-201ENST00000383891 107 ntBASIC2.13□□□□□ -2.07
EFNB3Q15768 Y_RNA.498-201ENST00000384460 102 ntBASIC2.13□□□□□ -2.07
EFNB3Q15768 AL079342.1-201ENST00000401460 267 ntBASIC2.13□□□□□ -2.07
EFNB3Q15768 AL359511.1-201ENST00000402970 211 ntBASIC2.13□□□□□ -2.07
EFNB3Q15768 MIR548F4-201ENST00000408515 105 ntBASIC2.13□□□□□ -2.07
EFNB3Q15768 ELOCP21-201ENST00000412558 336 ntBASIC2.13□□□□□ -2.07
EFNB3Q15768 SRIP3-201ENST00000413200 219 ntBASIC2.13□□□□□ -2.07
EFNB3Q15768 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2.13□□□□□ -2.07
EFNB3Q15768 HMGN2P9-201ENST00000476875 229 ntBASIC2.13□□□□□ -2.07
EFNB3Q15768 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.13□□□□□ -2.07
EFNB3Q15768 MRPS35P2-201ENST00000508242 191 ntBASIC2.13□□□□□ -2.07
EFNB3Q15768 AC093259.1-201ENST00000509755 300 ntBASIC2.13□□□□□ -2.07
EFNB3Q15768 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.13□□□□□ -2.07
EFNB3Q15768 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.13□□□□□ -2.07
EFNB3Q15768 RNU6-408P-201ENST00000515910 100 ntBASIC2.13□□□□□ -2.07
EFNB3Q15768 RNU6-1143P-201ENST00000516125 104 ntBASIC2.13□□□□□ -2.07
EFNB3Q15768 SNORA40.15-201ENST00000516884 107 ntBASIC2.13□□□□□ -2.07
EFNB3Q15768 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.13□□□□□ -2.07
EFNB3Q15768 AL117187.1-201ENST00000555482 181 ntBASIC2.13□□□□□ -2.07
EFNB3Q15768 PRR13P7-201ENST00000605538 430 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms