Protein–RNA interactions for Protein: Q13698

CACNA1S, Voltage-dependent L-type calcium channel subunit alpha-1S, humanhuman

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1SQ13698 RNU2-9P-201ENST00000410194 145 ntBASIC0.73□□□□□ -2.29
CACNA1SQ13698 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.73□□□□□ -2.29
CACNA1SQ13698 RNU7-167P-201ENST00000459160 62 ntBASIC0.73□□□□□ -2.29
CACNA1SQ13698 RNU6-221P-201ENST00000459541 99 ntBASIC0.73□□□□□ -2.29
CACNA1SQ13698 Y_RNA.654-201ENST00000497848 106 ntBASIC0.73□□□□□ -2.29
CACNA1SQ13698 SNORA31.4-201ENST00000516049 129 ntBASIC0.73□□□□□ -2.29
CACNA1SQ13698 RNA5SP503-201ENST00000517047 117 ntBASIC0.73□□□□□ -2.29
CACNA1SQ13698 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.73□□□□□ -2.29
CACNA1SQ13698 AC019288.1-201ENST00000557918 224 ntBASIC0.73□□□□□ -2.29
CACNA1SQ13698 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.73□□□□□ -2.29
CACNA1SQ13698 GHRLOS.1-201ENST00000610995 70 ntBASIC0.73□□□□□ -2.29
CACNA1SQ13698 MIR8076-201ENST00000611401 83 ntBASIC0.73□□□□□ -2.29
CACNA1SQ13698 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.73□□□□□ -2.29
CACNA1SQ13698 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.73□□□□□ -2.29
CACNA1SQ13698 ELL2P3-201ENST00000457883 1602 ntBASIC0.73□□□□□ -2.29
CACNA1SQ13698 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.72□□□□□ -2.29
CACNA1SQ13698 MIR302D-201ENST00000362275 68 ntBASIC0.72□□□□□ -2.29
CACNA1SQ13698 VTRNA1-3-201ENST00000365645 89 ntBASIC0.72□□□□□ -2.29
CACNA1SQ13698 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
CACNA1SQ13698 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
CACNA1SQ13698 MIR320B2-201ENST00000408479 138 ntBASIC0.72□□□□□ -2.29
CACNA1SQ13698 SNX2P2-201ENST00000424553 323 ntBASIC0.72□□□□□ -2.29
CACNA1SQ13698 MTND4P32-201ENST00000437189 1237 ntBASIC0.72□□□□□ -2.29
CACNA1SQ13698 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.72□□□□□ -2.29
CACNA1SQ13698 AC009237.7-201ENST00000447357 229 ntBASIC0.72□□□□□ -2.29
CACNA1SQ13698 ZNF736P8Y-201ENST00000451913 669 ntBASIC0.72□□□□□ -2.29
CACNA1SQ13698 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.72□□□□□ -2.29
CACNA1SQ13698 AC010493.1-201ENST00000513479 292 ntBASIC0.72□□□□□ -2.29
CACNA1SQ13698 RNU6-189P-201ENST00000516120 101 ntBASIC0.72□□□□□ -2.29
CACNA1SQ13698 RN7SKP287-201ENST00000516546 266 ntBASIC0.72□□□□□ -2.29
CACNA1SQ13698 MRPS36P4-201ENST00000534436 298 ntBASIC0.72□□□□□ -2.29
CACNA1SQ13698 SCOCP1-201ENST00000554676 349 ntBASIC0.72□□□□□ -2.29
CACNA1SQ13698 AC136932.1-201ENST00000574771 208 ntBASIC0.72□□□□□ -2.29
CACNA1SQ13698 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC0.72□□□□□ -2.29
CACNA1SQ13698 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.72□□□□□ -2.29
CACNA1SQ13698 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
CACNA1SQ13698 RNU6-1026P-201ENST00000384465 108 ntBASIC0.71□□□□□ -2.3
CACNA1SQ13698 Y_RNA.504-201ENST00000384481 104 ntBASIC0.71□□□□□ -2.3
CACNA1SQ13698 DYNLT3P2-201ENST00000442517 295 ntBASIC0.71□□□□□ -2.3
CACNA1SQ13698 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC0.71□□□□□ -2.3
CACNA1SQ13698 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.71□□□□□ -2.3
CACNA1SQ13698 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC0.71□□□□□ -2.3
CACNA1SQ13698 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.71□□□□□ -2.3
CACNA1SQ13698 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.71□□□□□ -2.3
CACNA1SQ13698 MIR548AB-201ENST00000584917 84 ntBASIC0.71□□□□□ -2.3
CACNA1SQ13698 AL513534.2-201ENST00000603836 250 ntBASIC0.71□□□□□ -2.3
CACNA1SQ13698 RNU6-85P-201ENST00000605989 107 ntBASIC0.71□□□□□ -2.3
CACNA1SQ13698 AC068792.1-201ENST00000621354 417 ntBASIC0.71□□□□□ -2.3
CACNA1SQ13698 RNU5B-2P-201ENST00000363036 113 ntBASIC0.71□□□□□ -2.3
CACNA1SQ13698 RNU6-996P-201ENST00000365438 107 ntBASIC0.71□□□□□ -2.3
CACNA1SQ13698 SNORA26.8-201ENST00000391306 124 ntBASIC0.71□□□□□ -2.3
CACNA1SQ13698 RN7SKP200-201ENST00000410564 320 ntBASIC0.71□□□□□ -2.3
CACNA1SQ13698 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC0.71□□□□□ -2.3
CACNA1SQ13698 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC0.71□□□□□ -2.3
CACNA1SQ13698 RNU6-261P-201ENST00000459506 102 ntBASIC0.71□□□□□ -2.3
CACNA1SQ13698 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.71□□□□□ -2.3
CACNA1SQ13698 RNU6-165P-201ENST00000517170 99 ntBASIC0.71□□□□□ -2.3
CACNA1SQ13698 MIR5696-201ENST00000578474 85 ntBASIC0.71□□□□□ -2.3
CACNA1SQ13698 AC004492.1-201ENST00000607036 742 ntBASIC0.71□□□□□ -2.3
CACNA1SQ13698 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.71□□□□□ -2.3
CACNA1SQ13698 AC064836.2-201ENST00000609491 462 ntBASIC0.71□□□□□ -2.3
CACNA1SQ13698 MIR8054-201ENST00000620877 86 ntBASIC0.71□□□□□ -2.3
CACNA1SQ13698 Z69908.1-201ENST00000622603 247 ntBASIC0.71□□□□□ -2.3
CACNA1SQ13698 MIR653-201ENST00000385279 96 ntBASIC0.7□□□□□ -2.3
CACNA1SQ13698 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.7□□□□□ -2.3
CACNA1SQ13698 RAB28P5-201ENST00000427490 651 ntBASIC0.7□□□□□ -2.3
CACNA1SQ13698 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.7□□□□□ -2.3
CACNA1SQ13698 RNU7-57P-201ENST00000459540 60 ntBASIC0.7□□□□□ -2.3
CACNA1SQ13698 RNA5SP121-201ENST00000516537 101 ntBASIC0.7□□□□□ -2.3
CACNA1SQ13698 RN7SKP88-201ENST00000516847 250 ntBASIC0.7□□□□□ -2.3
CACNA1SQ13698 AC091178.2-201ENST00000584401 117 ntBASIC0.7□□□□□ -2.3
CACNA1SQ13698 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.7□□□□□ -2.3
CACNA1SQ13698 7SK.8-201ENST00000612110 250 ntBASIC0.7□□□□□ -2.3
CACNA1SQ13698 7SK.11-201ENST00000615477 250 ntBASIC0.7□□□□□ -2.3
CACNA1SQ13698 7SK.13-201ENST00000622040 250 ntBASIC0.7□□□□□ -2.3
CACNA1SQ13698 RNU6-1123P-201ENST00000362347 106 ntBASIC0.69□□□□□ -2.3
CACNA1SQ13698 Y_RNA.287-201ENST00000364853 94 ntBASIC0.69□□□□□ -2.3
CACNA1SQ13698 SNORA32.2-201ENST00000384049 122 ntBASIC0.69□□□□□ -2.3
CACNA1SQ13698 RNU6-214P-201ENST00000384130 107 ntBASIC0.69□□□□□ -2.3
CACNA1SQ13698 MIR608-201ENST00000384820 100 ntBASIC0.69□□□□□ -2.3
CACNA1SQ13698 RNU6-248P-201ENST00000410720 107 ntBASIC0.69□□□□□ -2.3
CACNA1SQ13698 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC0.69□□□□□ -2.3
CACNA1SQ13698 MTCO2P19-201ENST00000427513 598 ntBASIC0.69□□□□□ -2.3
CACNA1SQ13698 AC098934.3-201ENST00000430450 190 ntBASIC0.69□□□□□ -2.3
CACNA1SQ13698 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.69□□□□□ -2.3
CACNA1SQ13698 TRBVA-201ENST00000498804 316 ntBASIC0.69□□□□□ -2.3
CACNA1SQ13698 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.69□□□□□ -2.3
CACNA1SQ13698 MIR4709-201ENST00000577272 72 ntBASIC0.69□□□□□ -2.3
CACNA1SQ13698 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.69□□□□□ -2.3
CACNA1SQ13698 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.69□□□□□ -2.3
CACNA1SQ13698 AC068790.2-201ENST00000602601 557 ntBASIC0.69□□□□□ -2.3
CACNA1SQ13698 AC021506.2-201ENST00000612354 169 ntBASIC0.69□□□□□ -2.3
CACNA1SQ13698 MIR8063-201ENST00000621930 81 ntBASIC0.69□□□□□ -2.3
CACNA1SQ13698 snoZ196.1-201ENST00000625269 89 ntBASIC0.69□□□□□ -2.3
CACNA1SQ13698 Y_RNA.296-201ENST00000364930 108 ntBASIC0.69□□□□□ -2.3
CACNA1SQ13698 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC0.69□□□□□ -2.3
CACNA1SQ13698 TIMM9P3-201ENST00000428659 274 ntBASIC0.69□□□□□ -2.3
CACNA1SQ13698 AC245047.7-201ENST00000440265 293 ntBASIC0.69□□□□□ -2.3
CACNA1SQ13698 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.69□□□□□ -2.3
CACNA1SQ13698 AC074290.1-201ENST00000448883 135 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms