Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AC069439.1-201ENST00000494739 167 ntBASIC1.62□□□□□ -2.15
SCN1BQ07699 AC008549.1-201ENST00000512900 643 ntBASIC1.62□□□□□ -2.15
SCN1BQ07699 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.62□□□□□ -2.15
SCN1BQ07699 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.62□□□□□ -2.15
SCN1BQ07699 AK6P2-201ENST00000549020 471 ntBASIC1.62□□□□□ -2.15
SCN1BQ07699 MIR4419B-201ENST00000577260 68 ntBASIC1.62□□□□□ -2.15
SCN1BQ07699 MIR5695-201ENST00000579717 85 ntBASIC1.62□□□□□ -2.15
SCN1BQ07699 MIR4742-201ENST00000581069 85 ntBASIC1.62□□□□□ -2.15
SCN1BQ07699 AC068790.6-201ENST00000602558 258 ntBASIC1.62□□□□□ -2.15
SCN1BQ07699 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.62□□□□□ -2.15
SCN1BQ07699 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.62□□□□□ -2.15
SCN1BQ07699 AC002553.4-201ENST00000616896 331 ntBASIC1.62□□□□□ -2.15
SCN1BQ07699 AL133216.2-202ENST00000634512 349 ntBASIC1.62□□□□□ -2.15
SCN1BQ07699 ICE2P2-201ENST00000483823 2787 ntBASIC1.62□□□□□ -2.15
SCN1BQ07699 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
SCN1BQ07699 Y_RNA.67-201ENST00000362870 100 ntBASIC1.61□□□□□ -2.15
SCN1BQ07699 U8.2-201ENST00000363156 134 ntBASIC1.61□□□□□ -2.15
SCN1BQ07699 RNU6-271P-201ENST00000363858 105 ntBASIC1.61□□□□□ -2.15
SCN1BQ07699 RNU6-1240P-201ENST00000365155 104 ntBASIC1.61□□□□□ -2.15
SCN1BQ07699 MIR10B-201ENST00000385011 110 ntBASIC1.61□□□□□ -2.15
SCN1BQ07699 MIR548F5-201ENST00000408421 86 ntBASIC1.61□□□□□ -2.15
SCN1BQ07699 EIF1P1-201ENST00000421436 341 ntBASIC1.61□□□□□ -2.15
SCN1BQ07699 MTND3P23-201ENST00000431980 347 ntBASIC1.61□□□□□ -2.15
SCN1BQ07699 SNORD5.1-201ENST00000458800 75 ntBASIC1.61□□□□□ -2.15
SCN1BQ07699 TRBV12-1-201ENST00000479785 344 ntBASIC1.61□□□□□ -2.15
SCN1BQ07699 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.61□□□□□ -2.15
SCN1BQ07699 AC103851.1-201ENST00000506833 274 ntBASIC1.61□□□□□ -2.15
SCN1BQ07699 AP000889.1-201ENST00000530968 660 ntBASIC1.61□□□□□ -2.15
SCN1BQ07699 CBX3P8-201ENST00000532412 525 ntBASIC1.61□□□□□ -2.15
SCN1BQ07699 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.61□□□□□ -2.15
SCN1BQ07699 AC104581.2-201ENST00000572227 430 ntBASIC1.61□□□□□ -2.15
SCN1BQ07699 BNIP3P10-201ENST00000605360 577 ntBASIC1.61□□□□□ -2.15
SCN1BQ07699 AL355802.3-201ENST00000607571 545 ntBASIC1.61□□□□□ -2.15
SCN1BQ07699 AC068137.4-201ENST00000638485 296 ntBASIC1.61□□□□□ -2.15
SCN1BQ07699 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.61□□□□□ -2.15
SCN1BQ07699 RNU6-222P-201ENST00000362438 107 ntBASIC1.6□□□□□ -2.15
SCN1BQ07699 U3.8-201ENST00000363675 217 ntBASIC1.6□□□□□ -2.15
SCN1BQ07699 Y_RNA.179-201ENST00000363844 90 ntBASIC1.6□□□□□ -2.15
SCN1BQ07699 SNORD48-201ENST00000364953 64 ntBASIC1.6□□□□□ -2.15
SCN1BQ07699 RNU6-203P-201ENST00000384038 104 ntBASIC1.6□□□□□ -2.15
SCN1BQ07699 Y_RNA.490-201ENST00000384413 102 ntBASIC1.6□□□□□ -2.15
SCN1BQ07699 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.6□□□□□ -2.15
SCN1BQ07699 RNU6-510P-201ENST00000391239 108 ntBASIC1.6□□□□□ -2.15
SCN1BQ07699 FCF1P9-201ENST00000412546 282 ntBASIC1.6□□□□□ -2.15
SCN1BQ07699 COX6CP10-201ENST00000416832 224 ntBASIC1.6□□□□□ -2.15
SCN1BQ07699 USMG5P1-201ENST00000425964 177 ntBASIC1.6□□□□□ -2.15
SCN1BQ07699 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
SCN1BQ07699 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.6□□□□□ -2.15
SCN1BQ07699 Y_RNA.706-201ENST00000516933 99 ntBASIC1.6□□□□□ -2.15
SCN1BQ07699 AF235103.2-201ENST00000525753 346 ntBASIC1.6□□□□□ -2.15
SCN1BQ07699 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.6□□□□□ -2.15
SCN1BQ07699 AC011494.1-201ENST00000596454 237 ntBASIC1.6□□□□□ -2.15
SCN1BQ07699 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.6□□□□□ -2.15
SCN1BQ07699 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
SCN1BQ07699 RNU5F-3P-201ENST00000363767 117 ntBASIC1.59□□□□□ -2.15
SCN1BQ07699 RNA5SP363-201ENST00000365072 115 ntBASIC1.59□□□□□ -2.15
SCN1BQ07699 MIR1185-2-201ENST00000408687 86 ntBASIC1.59□□□□□ -2.15
SCN1BQ07699 RNU7-34P-201ENST00000459394 64 ntBASIC1.59□□□□□ -2.15
SCN1BQ07699 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.59□□□□□ -2.15
SCN1BQ07699 RNU6-970P-201ENST00000516312 107 ntBASIC1.59□□□□□ -2.15
SCN1BQ07699 RNU6-1016P-201ENST00000516689 94 ntBASIC1.59□□□□□ -2.15
SCN1BQ07699 DEFB122-202ENST00000569013 197 ntBASIC1.59□□□□□ -2.15
SCN1BQ07699 MIR4709-201ENST00000577272 72 ntBASIC1.59□□□□□ -2.15
SCN1BQ07699 MIR4513-201ENST00000581077 86 ntBASIC1.59□□□□□ -2.15
SCN1BQ07699 MIR4422-201ENST00000581938 83 ntBASIC1.59□□□□□ -2.15
SCN1BQ07699 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.59□□□□□ -2.15
SCN1BQ07699 MZT1P2-201ENST00000604387 248 ntBASIC1.59□□□□□ -2.15
SCN1BQ07699 AP001485.1-201ENST00000604799 199 ntBASIC1.59□□□□□ -2.15
SCN1BQ07699 AC018462.2-201ENST00000605375 395 ntBASIC1.59□□□□□ -2.15
SCN1BQ07699 AC100812.1-201ENST00000607622 580 ntBASIC1.59□□□□□ -2.15
SCN1BQ07699 AC084782.3-201ENST00000612282 578 ntBASIC1.59□□□□□ -2.15
SCN1BQ07699 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
SCN1BQ07699 RNA5SP109-201ENST00000391010 116 ntBASIC1.58□□□□□ -2.16
SCN1BQ07699 RNU2-2P-201ENST00000410396 191 ntBASIC1.58□□□□□ -2.16
SCN1BQ07699 USP9YP16-201ENST00000430287 407 ntBASIC1.58□□□□□ -2.16
SCN1BQ07699 RPS3AP52-201ENST00000435639 297 ntBASIC1.58□□□□□ -2.16
SCN1BQ07699 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.58□□□□□ -2.16
SCN1BQ07699 NDUFB4P10-201ENST00000452541 359 ntBASIC1.58□□□□□ -2.16
SCN1BQ07699 USP9YP23-201ENST00000455085 407 ntBASIC1.58□□□□□ -2.16
SCN1BQ07699 RNU1-98P-201ENST00000458992 160 ntBASIC1.58□□□□□ -2.16
SCN1BQ07699 AL163195.1-201ENST00000496941 348 ntBASIC1.58□□□□□ -2.16
SCN1BQ07699 HMGN1P12-201ENST00000499125 195 ntBASIC1.58□□□□□ -2.16
SCN1BQ07699 AC026782.1-201ENST00000512952 449 ntBASIC1.58□□□□□ -2.16
SCN1BQ07699 AC093303.1-201ENST00000514549 295 ntBASIC1.58□□□□□ -2.16
SCN1BQ07699 RNU6-1114P-201ENST00000516022 107 ntBASIC1.58□□□□□ -2.16
SCN1BQ07699 AC024995.1-201ENST00000523014 93 ntBASIC1.58□□□□□ -2.16
SCN1BQ07699 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.58□□□□□ -2.16
SCN1BQ07699 AC060780.3-201ENST00000589464 80 ntBASIC1.58□□□□□ -2.16
SCN1BQ07699 AC010999.1-201ENST00000611856 324 ntBASIC1.58□□□□□ -2.16
SCN1BQ07699 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.58□□□□□ -2.16
SCN1BQ07699 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.58□□□□□ -2.16
SCN1BQ07699 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.58□□□□□ -2.16
SCN1BQ07699 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
SCN1BQ07699 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
SCN1BQ07699 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
SCN1BQ07699 MIR302D-201ENST00000362275 68 ntBASIC1.57□□□□□ -2.16
SCN1BQ07699 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
SCN1BQ07699 RNU1-78P-201ENST00000391248 165 ntBASIC1.57□□□□□ -2.16
SCN1BQ07699 AL079342.1-201ENST00000401460 267 ntBASIC1.57□□□□□ -2.16
SCN1BQ07699 MIR548K-201ENST00000408406 116 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms