Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.11□□□□□ -2.39
H3F3AP84243 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.11□□□□□ -2.39
H3F3AP84243 MTND5P17-201ENST00000418405 1603 ntBASIC0.11□□□□□ -2.39
H3F3AP84243 U8.16-201ENST00000391279 133 ntBASIC0.1□□□□□ -2.39
H3F3AP84243 MTCYBP10-201ENST00000424905 650 ntBASIC0.1□□□□□ -2.39
H3F3AP84243 AC092436.3-201ENST00000511788 257 ntBASIC0.1□□□□□ -2.39
H3F3AP84243 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.1□□□□□ -2.39
H3F3AP84243 MIR4431-201ENST00000579990 94 ntBASIC0.1□□□□□ -2.39
H3F3AP84243 AC011712.1-201ENST00000588959 234 ntBASIC0.1□□□□□ -2.39
H3F3AP84243 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.09□□□□□ -2.39
H3F3AP84243 RNA5SP264-201ENST00000363115 107 ntBASIC0.09□□□□□ -2.4
H3F3AP84243 RNU6-424P-201ENST00000384367 105 ntBASIC0.09□□□□□ -2.4
H3F3AP84243 RNU6-393P-201ENST00000384475 107 ntBASIC0.09□□□□□ -2.4
H3F3AP84243 Y_RNA.540-201ENST00000384638 111 ntBASIC0.09□□□□□ -2.4
H3F3AP84243 MIR1295A-201ENST00000408463 79 ntBASIC0.09□□□□□ -2.4
H3F3AP84243 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.09□□□□□ -2.4
H3F3AP84243 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC0.09□□□□□ -2.4
H3F3AP84243 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC0.09□□□□□ -2.4
H3F3AP84243 RNU6-221P-201ENST00000459541 99 ntBASIC0.09□□□□□ -2.4
H3F3AP84243 RNU7-12P-201ENST00000516030 62 ntBASIC0.09□□□□□ -2.4
H3F3AP84243 RNU7-99P-201ENST00000516271 62 ntBASIC0.09□□□□□ -2.4
H3F3AP84243 SNORA25.17-201ENST00000517184 124 ntBASIC0.09□□□□□ -2.4
H3F3AP84243 RSL24D1P11-201ENST00000591045 491 ntBASIC0.09□□□□□ -2.4
H3F3AP84243 AC023932.2-201ENST00000603176 175 ntBASIC0.09□□□□□ -2.4
H3F3AP84243 AC069431.2-201ENST00000604149 1099 ntBASIC0.09□□□□□ -2.4
H3F3AP84243 RNU6-94P-201ENST00000607728 107 ntBASIC0.09□□□□□ -2.4
H3F3AP84243 AL138726.1-201ENST00000614873 333 ntBASIC0.09□□□□□ -2.4
H3F3AP84243 AC007014.2-201ENST00000615581 479 ntBASIC0.09□□□□□ -2.4
H3F3AP84243 MIR6718-201ENST00000616153 80 ntBASIC0.09□□□□□ -2.4
H3F3AP84243 SEPT14P17-201ENST00000617978 177 ntBASIC0.09□□□□□ -2.4
H3F3AP84243 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.08□□□□□ -2.4
H3F3AP84243 MIR103A2-201ENST00000362154 78 ntBASIC0.08□□□□□ -2.4
H3F3AP84243 Y_RNA.265-201ENST00000364677 108 ntBASIC0.08□□□□□ -2.4
H3F3AP84243 RNU6-994P-201ENST00000410507 111 ntBASIC0.08□□□□□ -2.4
H3F3AP84243 AL663109.1-201ENST00000411498 844 ntBASIC0.08□□□□□ -2.4
H3F3AP84243 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.08□□□□□ -2.4
H3F3AP84243 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.08□□□□□ -2.4
H3F3AP84243 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC0.08□□□□□ -2.4
H3F3AP84243 MTCO1P19-201ENST00000443487 500 ntBASIC0.08□□□□□ -2.4
H3F3AP84243 EPS15P1-201ENST00000448836 336 ntBASIC0.08□□□□□ -2.4
H3F3AP84243 AC105313.1-201ENST00000509121 353 ntBASIC0.08□□□□□ -2.4
H3F3AP84243 AC010493.1-201ENST00000513479 292 ntBASIC0.08□□□□□ -2.4
H3F3AP84243 Y_RNA.672-201ENST00000516289 104 ntBASIC0.08□□□□□ -2.4
H3F3AP84243 RNU6-323P-201ENST00000521915 107 ntBASIC0.08□□□□□ -2.4
H3F3AP84243 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC0.08□□□□□ -2.4
H3F3AP84243 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC0.08□□□□□ -2.4
H3F3AP84243 MIR3192-201ENST00000584920 77 ntBASIC0.08□□□□□ -2.4
H3F3AP84243 AC005771.1-201ENST00000585581 349 ntBASIC0.08□□□□□ -2.4
H3F3AP84243 RNU5F-6P-201ENST00000362979 116 ntBASIC0.07□□□□□ -2.4
H3F3AP84243 RNA5SP494-201ENST00000410653 129 ntBASIC0.07□□□□□ -2.4
H3F3AP84243 RNU6-177P-201ENST00000411257 104 ntBASIC0.07□□□□□ -2.4
H3F3AP84243 MTCO2P34-201ENST00000421994 607 ntBASIC0.07□□□□□ -2.4
H3F3AP84243 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.07□□□□□ -2.4
H3F3AP84243 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.07□□□□□ -2.4
H3F3AP84243 RNU1-117P-201ENST00000517041 158 ntBASIC0.07□□□□□ -2.4
H3F3AP84243 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.07□□□□□ -2.4
H3F3AP84243 U6.73-201ENST00000619194 103 ntBASIC0.07□□□□□ -2.4
H3F3AP84243 AC008873.1-201ENST00000625051 138 ntBASIC0.07□□□□□ -2.4
H3F3AP84243 MIR103A1-201ENST00000362165 78 ntBASIC0.06□□□□□ -2.4
H3F3AP84243 RNU6-222P-201ENST00000362438 107 ntBASIC0.06□□□□□ -2.4
H3F3AP84243 RNU6-266P-201ENST00000364225 107 ntBASIC0.06□□□□□ -2.4
H3F3AP84243 RNU6-169P-201ENST00000365336 107 ntBASIC0.06□□□□□ -2.4
H3F3AP84243 Y_RNA.367-201ENST00000365544 101 ntBASIC0.06□□□□□ -2.4
H3F3AP84243 RNU6-434P-201ENST00000384376 107 ntBASIC0.06□□□□□ -2.4
H3F3AP84243 RNY1P4-201ENST00000384595 115 ntBASIC0.06□□□□□ -2.4
H3F3AP84243 SNORD70.1-201ENST00000391007 85 ntBASIC0.06□□□□□ -2.4
H3F3AP84243 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.06□□□□□ -2.4
H3F3AP84243 AC004854.1-201ENST00000440356 349 ntBASIC0.06□□□□□ -2.4
H3F3AP84243 MTND4LP16-201ENST00000440828 295 ntBASIC0.06□□□□□ -2.4
H3F3AP84243 AC093019.1-201ENST00000443135 252 ntBASIC0.06□□□□□ -2.4
H3F3AP84243 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.06□□□□□ -2.4
H3F3AP84243 AC010469.2-201ENST00000496412 480 ntBASIC0.06□□□□□ -2.4
H3F3AP84243 AC079140.5-201ENST00000507882 310 ntBASIC0.06□□□□□ -2.4
H3F3AP84243 RNA5SP454-201ENST00000517231 127 ntBASIC0.06□□□□□ -2.4
H3F3AP84243 AP003716.2-201ENST00000528260 108 ntBASIC0.06□□□□□ -2.4
H3F3AP84243 MIR4514-201ENST00000581410 57 ntBASIC0.06□□□□□ -2.4
H3F3AP84243 SNRPGP20-201ENST00000604477 205 ntBASIC0.06□□□□□ -2.4
H3F3AP84243 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.05□□□□□ -2.4
H3F3AP84243 SNORA67.2-201ENST00000384300 149 ntBASIC0.05□□□□□ -2.4
H3F3AP84243 MIR613-201ENST00000385248 95 ntBASIC0.05□□□□□ -2.4
H3F3AP84243 SNORD105-201ENST00000386910 85 ntBASIC0.05□□□□□ -2.4
H3F3AP84243 RPS26P42-201ENST00000413485 326 ntBASIC0.05□□□□□ -2.4
H3F3AP84243 RPL31P35-201ENST00000431058 377 ntBASIC0.05□□□□□ -2.4
H3F3AP84243 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC0.05□□□□□ -2.4
H3F3AP84243 RNU2-69P-201ENST00000516061 100 ntBASIC0.05□□□□□ -2.4
H3F3AP84243 AC069113.1-201ENST00000517763 267 ntBASIC0.05□□□□□ -2.4
H3F3AP84243 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.05□□□□□ -2.4
H3F3AP84243 AC005730.3-201ENST00000583067 366 ntBASIC0.05□□□□□ -2.4
H3F3AP84243 AL117336.2-201ENST00000602435 335 ntBASIC0.05□□□□□ -2.4
H3F3AP84243 AC025449.1-201ENST00000603896 529 ntBASIC0.05□□□□□ -2.4
H3F3AP84243 AC100812.1-201ENST00000607622 580 ntBASIC0.05□□□□□ -2.4
H3F3AP84243 AC138749.5-201ENST00000611461 208 ntBASIC0.05□□□□□ -2.4
H3F3AP84243 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.05□□□□□ -2.4
H3F3AP84243 AC009878.1-201ENST00000621819 340 ntBASIC0.05□□□□□ -2.4
H3F3AP84243 RNU6-501P-201ENST00000364072 100 ntBASIC0.04□□□□□ -2.4
H3F3AP84243 RNU4-67P-201ENST00000364569 141 ntBASIC0.04□□□□□ -2.4
H3F3AP84243 Y_RNA.476-201ENST00000384347 108 ntBASIC0.04□□□□□ -2.4
H3F3AP84243 RNU4-46P-201ENST00000410818 138 ntBASIC0.04□□□□□ -2.4
H3F3AP84243 RPL39P5-202ENST00000512505 151 ntBASIC0.04□□□□□ -2.4
H3F3AP84243 MTND2P31-201ENST00000512602 616 ntBASIC0.04□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms