Protein–RNA interactions for Protein: P78367

NKX3-2, Homeobox protein Nkx-3.2, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-2P78367 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.24□□□□□ -1.89
NKX3-2P78367 MIR3144-201ENST00000579460 79 ntBASIC3.24□□□□□ -1.89
NKX3-2P78367 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.24□□□□□ -1.89
NKX3-2P78367 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.24□□□□□ -1.89
NKX3-2P78367 RNU6-91P-201ENST00000607774 107 ntBASIC3.24□□□□□ -1.89
NKX3-2P78367 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
NKX3-2P78367 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.24□□□□□ -1.89
NKX3-2P78367 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.24□□□□□ -1.89
NKX3-2P78367 AC010680.1-201ENST00000590024 3590 ntBASIC3.23□□□□□ -1.89
NKX3-2P78367 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
NKX3-2P78367 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.23□□□□□ -1.89
NKX3-2P78367 SNORD87-201ENST00000364849 89 ntBASIC3.23□□□□□ -1.89
NKX3-2P78367 Y_RNA.329-201ENST00000365209 107 ntBASIC3.23□□□□□ -1.89
NKX3-2P78367 RNU6-1310P-201ENST00000384153 107 ntBASIC3.23□□□□□ -1.89
NKX3-2P78367 MIR147B-201ENST00000390185 80 ntBASIC3.23□□□□□ -1.89
NKX3-2P78367 MIR320B2-201ENST00000408479 138 ntBASIC3.23□□□□□ -1.89
NKX3-2P78367 RNU6-1077P-201ENST00000410506 102 ntBASIC3.23□□□□□ -1.89
NKX3-2P78367 RNU6-1135P-201ENST00000411083 103 ntBASIC3.23□□□□□ -1.89
NKX3-2P78367 BTF3P11-201ENST00000426582 477 ntBASIC3.23□□□□□ -1.89
NKX3-2P78367 AC027124.2-201ENST00000428249 105 ntBASIC3.23□□□□□ -1.89
NKX3-2P78367 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.23□□□□□ -1.89
NKX3-2P78367 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.23□□□□□ -1.89
NKX3-2P78367 snoU13.14-201ENST00000459372 104 ntBASIC3.23□□□□□ -1.89
NKX3-2P78367 RNA5SP380-201ENST00000517190 98 ntBASIC3.23□□□□□ -1.89
NKX3-2P78367 AC104027.1-201ENST00000521887 300 ntBASIC3.23□□□□□ -1.89
NKX3-2P78367 AL138880.2-201ENST00000616214 239 ntBASIC3.23□□□□□ -1.89
NKX3-2P78367 AC132825.6-201ENST00000638861 357 ntBASIC3.23□□□□□ -1.89
NKX3-2P78367 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
NKX3-2P78367 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
NKX3-2P78367 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.23□□□□□ -1.89
NKX3-2P78367 AL359854.1-201ENST00000614203 1594 ntBASIC3.22□□□□□ -1.89
NKX3-2P78367 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.22□□□□□ -1.89
NKX3-2P78367 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
NKX3-2P78367 RNU6-1272P-201ENST00000362776 107 ntBASIC3.22□□□□□ -1.89
NKX3-2P78367 SNORD114-19-201ENST00000363072 75 ntBASIC3.22□□□□□ -1.89
NKX3-2P78367 Y_RNA.435-201ENST00000384095 112 ntBASIC3.22□□□□□ -1.89
NKX3-2P78367 RNU6-750P-201ENST00000390946 107 ntBASIC3.22□□□□□ -1.89
NKX3-2P78367 AC004386.2-201ENST00000441858 148 ntBASIC3.22□□□□□ -1.89
NKX3-2P78367 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.22□□□□□ -1.89
NKX3-2P78367 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.22□□□□□ -1.89
NKX3-2P78367 RNA5SP217-201ENST00000515959 91 ntBASIC3.22□□□□□ -1.89
NKX3-2P78367 RNU6-436P-201ENST00000516171 114 ntBASIC3.22□□□□□ -1.89
NKX3-2P78367 RNU6-107P-201ENST00000516643 102 ntBASIC3.22□□□□□ -1.89
NKX3-2P78367 AC068657.1-201ENST00000520807 306 ntBASIC3.22□□□□□ -1.89
NKX3-2P78367 AP005660.1-201ENST00000522972 293 ntBASIC3.22□□□□□ -1.89
NKX3-2P78367 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.22□□□□□ -1.89
NKX3-2P78367 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.22□□□□□ -1.89
NKX3-2P78367 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
NKX3-2P78367 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
NKX3-2P78367 AL365361.1-201ENST00000566942 3481 ntBASIC3.21□□□□□ -1.89
NKX3-2P78367 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
NKX3-2P78367 AP003122.5-201ENST00000527668 3766 ntBASIC3.21□□□□□ -1.9
NKX3-2P78367 Y_RNA.398-201ENST00000383952 99 ntBASIC3.21□□□□□ -1.9
NKX3-2P78367 AL357139.1-201ENST00000407792 426 ntBASIC3.21□□□□□ -1.9
NKX3-2P78367 RNA5SP504-201ENST00000410676 117 ntBASIC3.21□□□□□ -1.9
NKX3-2P78367 AL451074.5-201ENST00000415894 435 ntBASIC3.21□□□□□ -1.9
NKX3-2P78367 SNORD109B-201ENST00000458961 67 ntBASIC3.21□□□□□ -1.9
NKX3-2P78367 SNORD109A-201ENST00000459128 67 ntBASIC3.21□□□□□ -1.9
NKX3-2P78367 AC112771.1-201ENST00000463581 102 ntBASIC3.21□□□□□ -1.9
NKX3-2P78367 RPL31P41-201ENST00000477967 372 ntBASIC3.21□□□□□ -1.9
NKX3-2P78367 AC145146.1-201ENST00000496370 254 ntBASIC3.21□□□□□ -1.9
NKX3-2P78367 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.21□□□□□ -1.9
NKX3-2P78367 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.21□□□□□ -1.9
NKX3-2P78367 RNU2-12P-201ENST00000517216 168 ntBASIC3.21□□□□□ -1.9
NKX3-2P78367 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
NKX3-2P78367 EIF4A1P12-201ENST00000551910 141 ntBASIC3.21□□□□□ -1.9
NKX3-2P78367 AL391813.1-201ENST00000603098 260 ntBASIC3.21□□□□□ -1.9
NKX3-2P78367 AC107294.3-201ENST00000609211 526 ntBASIC3.21□□□□□ -1.9
NKX3-2P78367 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
NKX3-2P78367 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.21□□□□□ -1.9
NKX3-2P78367 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
NKX3-2P78367 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
NKX3-2P78367 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.2□□□□□ -1.9
NKX3-2P78367 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
NKX3-2P78367 RNA5SP240-201ENST00000365355 128 ntBASIC3.2□□□□□ -1.9
NKX3-2P78367 SNORA18.2-201ENST00000383865 132 ntBASIC3.2□□□□□ -1.9
NKX3-2P78367 RNY1P5-201ENST00000383890 115 ntBASIC3.2□□□□□ -1.9
NKX3-2P78367 MIR186-201ENST00000384988 86 ntBASIC3.2□□□□□ -1.9
NKX3-2P78367 MIR548I2-201ENST00000408348 149 ntBASIC3.2□□□□□ -1.9
NKX3-2P78367 U3.40-201ENST00000408706 208 ntBASIC3.2□□□□□ -1.9
NKX3-2P78367 RNU5E-9P-201ENST00000411164 104 ntBASIC3.2□□□□□ -1.9
NKX3-2P78367 TMSB4XP3-201ENST00000445144 114 ntBASIC3.2□□□□□ -1.9
NKX3-2P78367 AL441985.1-201ENST00000457727 251 ntBASIC3.2□□□□□ -1.9
NKX3-2P78367 Y_RNA.637-201ENST00000459424 114 ntBASIC3.2□□□□□ -1.9
NKX3-2P78367 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.2□□□□□ -1.9
NKX3-2P78367 SNORA31.26-201ENST00000517250 137 ntBASIC3.2□□□□□ -1.9
NKX3-2P78367 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.2□□□□□ -1.9
NKX3-2P78367 MIR5692C2-201ENST00000577959 77 ntBASIC3.2□□□□□ -1.9
NKX3-2P78367 AC005562.2-201ENST00000618264 111 ntBASIC3.2□□□□□ -1.9
NKX3-2P78367 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.19□□□□□ -1.9
NKX3-2P78367 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
NKX3-2P78367 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
NKX3-2P78367 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NKX3-2P78367 RNU6-324P-201ENST00000363957 106 ntBASIC3.19□□□□□ -1.9
NKX3-2P78367 RNU6-1264P-201ENST00000383891 107 ntBASIC3.19□□□□□ -1.9
NKX3-2P78367 SNORA67.4-201ENST00000384688 142 ntBASIC3.19□□□□□ -1.9
NKX3-2P78367 RNA5SP21-201ENST00000410917 96 ntBASIC3.19□□□□□ -1.9
NKX3-2P78367 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.19□□□□□ -1.9
NKX3-2P78367 RNU1-117P-201ENST00000517041 158 ntBASIC3.19□□□□□ -1.9
NKX3-2P78367 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 159.7 ms