Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC0.32□□□□□ -2.36
SKP1P63208 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC0.32□□□□□ -2.36
SKP1P63208 AL158050.2-201ENST00000605336 568 ntBASIC0.32□□□□□ -2.36
SKP1P63208 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.32□□□□□ -2.36
SKP1P63208 MIR6516-201ENST00000630554 81 ntBASIC0.32□□□□□ -2.36
SKP1P63208 SNORD114-23-201ENST00000363536 72 ntBASIC0.31□□□□□ -2.36
SKP1P63208 RNU6-108P-201ENST00000365558 107 ntBASIC0.31□□□□□ -2.36
SKP1P63208 RNU6-424P-201ENST00000384367 105 ntBASIC0.31□□□□□ -2.36
SKP1P63208 AL355143.1-201ENST00000407101 841 ntBASIC0.31□□□□□ -2.36
SKP1P63208 MIR320B2-201ENST00000408479 138 ntBASIC0.31□□□□□ -2.36
SKP1P63208 RPS3AP3-201ENST00000411933 242 ntBASIC0.31□□□□□ -2.36
SKP1P63208 MTCO2P12-201ENST00000427426 682 ntBASIC0.31□□□□□ -2.36
SKP1P63208 RNU4-57P-201ENST00000515980 135 ntBASIC0.31□□□□□ -2.36
SKP1P63208 RNU2-46P-201ENST00000517038 113 ntBASIC0.31□□□□□ -2.36
SKP1P63208 AC022868.1-201ENST00000517767 391 ntBASIC0.31□□□□□ -2.36
SKP1P63208 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.31□□□□□ -2.36
SKP1P63208 AGGF1P4-201ENST00000568249 801 ntBASIC0.31□□□□□ -2.36
SKP1P63208 AC004223.2-201ENST00000590309 544 ntBASIC0.31□□□□□ -2.36
SKP1P63208 MIR7844-201ENST00000616161 122 ntBASIC0.31□□□□□ -2.36
SKP1P63208 U6.73-201ENST00000619194 103 ntBASIC0.31□□□□□ -2.36
SKP1P63208 AC068787.1-201ENST00000623908 691 ntBASIC0.31□□□□□ -2.36
SKP1P63208 RNU6-227P-201ENST00000362865 103 ntBASIC0.3□□□□□ -2.36
SKP1P63208 RNU6-1097P-201ENST00000363586 107 ntBASIC0.3□□□□□ -2.36
SKP1P63208 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
SKP1P63208 Y_RNA.399-201ENST00000383955 105 ntBASIC0.3□□□□□ -2.36
SKP1P63208 RNU6-1105P-201ENST00000384774 107 ntBASIC0.3□□□□□ -2.36
SKP1P63208 MIR122-201ENST00000385044 85 ntBASIC0.3□□□□□ -2.36
SKP1P63208 MIR216A-201ENST00000385063 110 ntBASIC0.3□□□□□ -2.36
SKP1P63208 RNU6-1186P-201ENST00000410429 97 ntBASIC0.3□□□□□ -2.36
SKP1P63208 RNA5SP494-201ENST00000410653 129 ntBASIC0.3□□□□□ -2.36
SKP1P63208 STAG3L5P-204ENST00000443759 179 ntBASIC0.3□□□□□ -2.36
SKP1P63208 AC002350.1-201ENST00000490759 375 ntBASIC0.3□□□□□ -2.36
SKP1P63208 RNU6-1110P-201ENST00000516462 101 ntBASIC0.3□□□□□ -2.36
SKP1P63208 RNU6-344P-201ENST00000516635 111 ntBASIC0.3□□□□□ -2.36
SKP1P63208 RNU6-323P-201ENST00000521915 107 ntBASIC0.3□□□□□ -2.36
SKP1P63208 AC027419.1-201ENST00000522976 328 ntBASIC0.3□□□□□ -2.36
SKP1P63208 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC0.3□□□□□ -2.36
SKP1P63208 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.3□□□□□ -2.36
SKP1P63208 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.3□□□□□ -2.36
SKP1P63208 MIR4703-201ENST00000577728 79 ntBASIC0.3□□□□□ -2.36
SKP1P63208 BNIP3P39-201ENST00000601077 554 ntBASIC0.3□□□□□ -2.36
SKP1P63208 RNA5SP193-201ENST00000410353 107 ntBASIC0.29□□□□□ -2.36
SKP1P63208 AC106883.1-201ENST00000418805 562 ntBASIC0.29□□□□□ -2.36
SKP1P63208 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC0.29□□□□□ -2.36
SKP1P63208 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.29□□□□□ -2.36
SKP1P63208 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.29□□□□□ -2.36
SKP1P63208 RNA5SP134-201ENST00000516492 96 ntBASIC0.29□□□□□ -2.36
SKP1P63208 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
SKP1P63208 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.28□□□□□ -2.36
SKP1P63208 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.28□□□□□ -2.36
SKP1P63208 RNU6-1067P-201ENST00000384752 107 ntBASIC0.28□□□□□ -2.36
SKP1P63208 AL031577.2-201ENST00000404133 280 ntBASIC0.28□□□□□ -2.36
SKP1P63208 Y_RNA.598-201ENST00000410480 95 ntBASIC0.28□□□□□ -2.36
SKP1P63208 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC0.28□□□□□ -2.36
SKP1P63208 MTND4LP16-201ENST00000440828 295 ntBASIC0.28□□□□□ -2.36
SKP1P63208 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC0.28□□□□□ -2.36
SKP1P63208 RPS20P10-201ENST00000451209 253 ntBASIC0.28□□□□□ -2.36
SKP1P63208 TPT1P7-201ENST00000458300 517 ntBASIC0.28□□□□□ -2.36
SKP1P63208 SNORD111.1-201ENST00000516421 86 ntBASIC0.28□□□□□ -2.36
SKP1P63208 RNU6-612P-201ENST00000516909 102 ntBASIC0.28□□□□□ -2.36
SKP1P63208 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.28□□□□□ -2.36
SKP1P63208 AL096861.1-201ENST00000610899 123 ntBASIC0.28□□□□□ -2.36
SKP1P63208 AC139792.3-201ENST00000623525 224 ntBASIC0.28□□□□□ -2.36
SKP1P63208 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.28□□□□□ -2.36
SKP1P63208 AC090625.1-201ENST00000357130 210 ntBASIC0.27□□□□□ -2.37
SKP1P63208 SNORD113-6-201ENST00000363345 75 ntBASIC0.27□□□□□ -2.37
SKP1P63208 RNU5F-7P-201ENST00000363696 115 ntBASIC0.27□□□□□ -2.37
SKP1P63208 RNU6-1286P-201ENST00000383871 107 ntBASIC0.27□□□□□ -2.37
SKP1P63208 RNU6-342P-201ENST00000384521 104 ntBASIC0.27□□□□□ -2.37
SKP1P63208 MIR613-201ENST00000385248 95 ntBASIC0.27□□□□□ -2.37
SKP1P63208 RNU1-119P-201ENST00000391122 165 ntBASIC0.27□□□□□ -2.37
SKP1P63208 RNA5SP504-201ENST00000410676 117 ntBASIC0.27□□□□□ -2.37
SKP1P63208 AC098592.1-201ENST00000419352 333 ntBASIC0.27□□□□□ -2.37
SKP1P63208 RPL23AP50-201ENST00000434149 455 ntBASIC0.27□□□□□ -2.37
SKP1P63208 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC0.27□□□□□ -2.37
SKP1P63208 AC004854.1-201ENST00000440356 349 ntBASIC0.27□□□□□ -2.37
SKP1P63208 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC0.27□□□□□ -2.37
SKP1P63208 RPS29P15-201ENST00000458329 171 ntBASIC0.27□□□□□ -2.37
SKP1P63208 SCARNA18-201ENST00000459004 134 ntBASIC0.27□□□□□ -2.37
SKP1P63208 RNU6-430P-201ENST00000517078 107 ntBASIC0.27□□□□□ -2.37
SKP1P63208 MTND4LP26-201ENST00000518144 282 ntBASIC0.27□□□□□ -2.37
SKP1P63208 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.27□□□□□ -2.37
SKP1P63208 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC0.27□□□□□ -2.37
SKP1P63208 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.27□□□□□ -2.37
SKP1P63208 RNU6-85P-201ENST00000605989 107 ntBASIC0.27□□□□□ -2.37
SKP1P63208 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.27□□□□□ -2.37
SKP1P63208 AC093913.1-201ENST00000614178 329 ntBASIC0.27□□□□□ -2.37
SKP1P63208 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.27□□□□□ -2.37
SKP1P63208 7SK.10-201ENST00000621414 298 ntBASIC0.27□□□□□ -2.37
SKP1P63208 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.27□□□□□ -2.37
SKP1P63208 AC010487.4-201ENST00000637027 61 ntBASIC0.27□□□□□ -2.37
SKP1P63208 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
SKP1P63208 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC0.26□□□□□ -2.37
SKP1P63208 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.26□□□□□ -2.37
SKP1P63208 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.26□□□□□ -2.37
SKP1P63208 AC093019.1-201ENST00000443135 252 ntBASIC0.26□□□□□ -2.37
SKP1P63208 RNU7-167P-201ENST00000459160 62 ntBASIC0.26□□□□□ -2.37
SKP1P63208 RPS29P27-201ENST00000463711 170 ntBASIC0.26□□□□□ -2.37
SKP1P63208 RNA5SP436-201ENST00000516020 115 ntBASIC0.26□□□□□ -2.37
SKP1P63208 MTND2P32-201ENST00000521584 1038 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms