Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 AC134026.1-201ENST00000623249 2239 ntBASIC0.37□□□□□ -2.35
CLDN12P56749 AP000568.1-201ENST00000282964 442 ntBASIC0.37□□□□□ -2.35
CLDN12P56749 MIR1-2-201ENST00000384961 85 ntBASIC0.37□□□□□ -2.35
CLDN12P56749 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.37□□□□□ -2.35
CLDN12P56749 SNORA75.2-201ENST00000391138 150 ntBASIC0.37□□□□□ -2.35
CLDN12P56749 SNORA75.3-201ENST00000391231 150 ntBASIC0.37□□□□□ -2.35
CLDN12P56749 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.37□□□□□ -2.35
CLDN12P56749 SSR1P2-201ENST00000415208 787 ntBASIC0.37□□□□□ -2.35
CLDN12P56749 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.37□□□□□ -2.35
CLDN12P56749 ZNF114P1-201ENST00000453500 292 ntBASIC0.37□□□□□ -2.35
CLDN12P56749 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC0.37□□□□□ -2.35
CLDN12P56749 LINC01399-202ENST00000458450 244 ntBASIC0.37□□□□□ -2.35
CLDN12P56749 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC0.37□□□□□ -2.35
CLDN12P56749 RNU7-28P-201ENST00000516759 62 ntBASIC0.37□□□□□ -2.35
CLDN12P56749 RNU6-1223P-201ENST00000517124 104 ntBASIC0.37□□□□□ -2.35
CLDN12P56749 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
CLDN12P56749 AL137161.1-201ENST00000532231 390 ntBASIC0.37□□□□□ -2.35
CLDN12P56749 AP002001.1-203ENST00000534002 267 ntBASIC0.37□□□□□ -2.35
CLDN12P56749 SUB1P2-201ENST00000556401 297 ntBASIC0.37□□□□□ -2.35
CLDN12P56749 MIR4778-201ENST00000577635 80 ntBASIC0.37□□□□□ -2.35
CLDN12P56749 AL022161.1-201ENST00000604390 213 ntBASIC0.37□□□□□ -2.35
CLDN12P56749 AL391903.3-201ENST00000612158 163 ntBASIC0.37□□□□□ -2.35
CLDN12P56749 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.37□□□□□ -2.35
CLDN12P56749 AC139792.3-201ENST00000623525 224 ntBASIC0.37□□□□□ -2.35
CLDN12P56749 AP000720.1-201ENST00000625091 483 ntBASIC0.37□□□□□ -2.35
CLDN12P56749 RNY4P34-201ENST00000364779 95 ntBASIC0.36□□□□□ -2.35
CLDN12P56749 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.36□□□□□ -2.35
CLDN12P56749 SNORA50A-201ENST00000384225 134 ntBASIC0.36□□□□□ -2.35
CLDN12P56749 RNU6-424P-201ENST00000384367 105 ntBASIC0.36□□□□□ -2.35
CLDN12P56749 AL355796.1-201ENST00000406706 323 ntBASIC0.36□□□□□ -2.35
CLDN12P56749 RNA5SP247-201ENST00000411181 105 ntBASIC0.36□□□□□ -2.35
CLDN12P56749 AC114737.2-201ENST00000421583 173 ntBASIC0.36□□□□□ -2.35
CLDN12P56749 AC005002.2-201ENST00000438228 269 ntBASIC0.36□□□□□ -2.35
CLDN12P56749 AC004854.1-201ENST00000440356 349 ntBASIC0.36□□□□□ -2.35
CLDN12P56749 AC233266.1-201ENST00000454518 96 ntBASIC0.36□□□□□ -2.35
CLDN12P56749 U8.21-201ENST00000459536 136 ntBASIC0.36□□□□□ -2.35
CLDN12P56749 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC0.36□□□□□ -2.35
CLDN12P56749 RNA5SP220-201ENST00000516298 104 ntBASIC0.36□□□□□ -2.35
CLDN12P56749 RNU6-229P-201ENST00000516614 102 ntBASIC0.36□□□□□ -2.35
CLDN12P56749 AC004223.2-201ENST00000590309 544 ntBASIC0.36□□□□□ -2.35
CLDN12P56749 AC242852.1-201ENST00000612151 96 ntBASIC0.36□□□□□ -2.35
CLDN12P56749 MIR6734-201ENST00000621166 68 ntBASIC0.36□□□□□ -2.35
CLDN12P56749 AC244015.1-201ENST00000622301 99 ntBASIC0.36□□□□□ -2.35
CLDN12P56749 SCARNA4-201ENST00000629045 128 ntBASIC0.36□□□□□ -2.35
CLDN12P56749 RNA5SP347-201ENST00000362445 119 ntBASIC0.35□□□□□ -2.35
CLDN12P56749 RNU6-945P-201ENST00000383947 107 ntBASIC0.35□□□□□ -2.35
CLDN12P56749 RNU6-245P-201ENST00000384020 107 ntBASIC0.35□□□□□ -2.35
CLDN12P56749 MIR562-201ENST00000384894 95 ntBASIC0.35□□□□□ -2.35
CLDN12P56749 SNORD89-201ENST00000390981 114 ntBASIC0.35□□□□□ -2.35
CLDN12P56749 RNU6-1186P-201ENST00000410429 97 ntBASIC0.35□□□□□ -2.35
CLDN12P56749 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.35□□□□□ -2.35
CLDN12P56749 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.35□□□□□ -2.35
CLDN12P56749 AC098934.3-201ENST00000430450 190 ntBASIC0.35□□□□□ -2.35
CLDN12P56749 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.35□□□□□ -2.35
CLDN12P56749 AC025465.4-201ENST00000513422 638 ntBASIC0.35□□□□□ -2.35
CLDN12P56749 RN7SKP12-201ENST00000516275 143 ntBASIC0.35□□□□□ -2.35
CLDN12P56749 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.35□□□□□ -2.35
CLDN12P56749 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.35□□□□□ -2.35
CLDN12P56749 AC245014.2-201ENST00000603689 287 ntBASIC0.35□□□□□ -2.35
CLDN12P56749 AC246785.4-201ENST00000605374 287 ntBASIC0.35□□□□□ -2.35
CLDN12P56749 MIR98-201ENST00000606724 119 ntBASIC0.35□□□□□ -2.35
CLDN12P56749 SNORD11B-201ENST00000607707 90 ntBASIC0.35□□□□□ -2.35
CLDN12P56749 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.35□□□□□ -2.35
CLDN12P56749 AC010608.3-201ENST00000625048 527 ntBASIC0.35□□□□□ -2.35
CLDN12P56749 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.34□□□□□ -2.36
CLDN12P56749 AC244023.1-201ENST00000426884 112 ntBASIC0.34□□□□□ -2.36
CLDN12P56749 AC093019.1-201ENST00000443135 252 ntBASIC0.34□□□□□ -2.36
CLDN12P56749 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.34□□□□□ -2.36
CLDN12P56749 MTATP6P9-201ENST00000515039 680 ntBASIC0.34□□□□□ -2.36
CLDN12P56749 RNU4-57P-201ENST00000515980 135 ntBASIC0.34□□□□□ -2.36
CLDN12P56749 RNU6-1110P-201ENST00000516462 101 ntBASIC0.34□□□□□ -2.36
CLDN12P56749 RNA5SP54-201ENST00000516951 92 ntBASIC0.34□□□□□ -2.36
CLDN12P56749 AC022868.1-201ENST00000517767 391 ntBASIC0.34□□□□□ -2.36
CLDN12P56749 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC0.34□□□□□ -2.36
CLDN12P56749 AC242498.1-201ENST00000604134 111 ntBASIC0.34□□□□□ -2.36
CLDN12P56749 AC004223.4-201ENST00000612426 332 ntBASIC0.34□□□□□ -2.36
CLDN12P56749 AP001506.1-201ENST00000615444 211 ntBASIC0.34□□□□□ -2.36
CLDN12P56749 AC243994.1-201ENST00000618627 109 ntBASIC0.34□□□□□ -2.36
CLDN12P56749 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.34□□□□□ -2.36
CLDN12P56749 MIR5087-201ENST00000635826 76 ntBASIC0.34□□□□□ -2.36
CLDN12P56749 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
CLDN12P56749 RNU6-1266P-201ENST00000362794 105 ntBASIC0.33□□□□□ -2.36
CLDN12P56749 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.33□□□□□ -2.36
CLDN12P56749 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.33□□□□□ -2.36
CLDN12P56749 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.33□□□□□ -2.36
CLDN12P56749 AC092423.1-201ENST00000430165 186 ntBASIC0.33□□□□□ -2.36
CLDN12P56749 AL445305.1-201ENST00000432577 575 ntBASIC0.33□□□□□ -2.36
CLDN12P56749 STAG3L5P-204ENST00000443759 179 ntBASIC0.33□□□□□ -2.36
CLDN12P56749 OFD1P4Y-201ENST00000455273 1179 ntBASIC0.33□□□□□ -2.36
CLDN12P56749 TPT1P7-201ENST00000458300 517 ntBASIC0.33□□□□□ -2.36
CLDN12P56749 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.33□□□□□ -2.36
CLDN12P56749 MRPS36P4-201ENST00000534436 298 ntBASIC0.33□□□□□ -2.36
CLDN12P56749 AC016957.1-201ENST00000534895 309 ntBASIC0.33□□□□□ -2.36
CLDN12P56749 AC006435.5-201ENST00000624486 112 ntBASIC0.33□□□□□ -2.36
CLDN12P56749 RNU1-133P-201ENST00000364867 167 ntBASIC0.32□□□□□ -2.36
CLDN12P56749 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
CLDN12P56749 RNY1P14-201ENST00000384426 108 ntBASIC0.32□□□□□ -2.36
CLDN12P56749 RNU6-1237P-201ENST00000384777 107 ntBASIC0.32□□□□□ -2.36
CLDN12P56749 FGFR1OP2P1-201ENST00000395943 500 ntBASIC0.32□□□□□ -2.36
CLDN12P56749 AL031577.2-201ENST00000404133 280 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms