Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 MTND4P19-201ENST00000446659 478 ntBASIC2.29□□□□□ -2.04
NR1H2P55055 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.29□□□□□ -2.04
NR1H2P55055 AL163540.1-201ENST00000485382 386 ntBASIC2.29□□□□□ -2.04
NR1H2P55055 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.29□□□□□ -2.04
NR1H2P55055 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.29□□□□□ -2.04
NR1H2P55055 ATP5EP1-201ENST00000510257 156 ntBASIC2.29□□□□□ -2.04
NR1H2P55055 RNU2-34P-201ENST00000516534 121 ntBASIC2.29□□□□□ -2.04
NR1H2P55055 RNU4-77P-201ENST00000516692 156 ntBASIC2.29□□□□□ -2.04
NR1H2P55055 Y_RNA.711-201ENST00000516993 102 ntBASIC2.29□□□□□ -2.04
NR1H2P55055 AC093023.1-201ENST00000547375 507 ntBASIC2.29□□□□□ -2.04
NR1H2P55055 AC006600.1-201ENST00000572529 153 ntBASIC2.29□□□□□ -2.04
NR1H2P55055 SNORD53-201ENST00000579969 78 ntBASIC2.29□□□□□ -2.04
NR1H2P55055 MIR5694-201ENST00000581190 76 ntBASIC2.29□□□□□ -2.04
NR1H2P55055 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.29□□□□□ -2.04
NR1H2P55055 AC083806.3-201ENST00000614016 455 ntBASIC2.29□□□□□ -2.04
NR1H2P55055 AL590808.1-201ENST00000618696 141 ntBASIC2.29□□□□□ -2.04
NR1H2P55055 U2.1-201ENST00000618978 145 ntBASIC2.29□□□□□ -2.04
NR1H2P55055 MIR4272-201ENST00000635924 64 ntBASIC2.29□□□□□ -2.04
NR1H2P55055 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
NR1H2P55055 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
NR1H2P55055 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
NR1H2P55055 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
NR1H2P55055 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
NR1H2P55055 MIR21-201ENST00000362134 72 ntBASIC2.28□□□□□ -2.04
NR1H2P55055 RNU6-23P-201ENST00000363283 107 ntBASIC2.28□□□□□ -2.04
NR1H2P55055 SNORA22B-201ENST00000383876 138 ntBASIC2.28□□□□□ -2.04
NR1H2P55055 MIR628-201ENST00000385229 95 ntBASIC2.28□□□□□ -2.04
NR1H2P55055 AL160004.2-201ENST00000432935 350 ntBASIC2.28□□□□□ -2.04
NR1H2P55055 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.28□□□□□ -2.04
NR1H2P55055 RNU1-41P-201ENST00000516161 162 ntBASIC2.28□□□□□ -2.04
NR1H2P55055 RNU1-48P-201ENST00000516400 162 ntBASIC2.28□□□□□ -2.04
NR1H2P55055 RNU6-344P-201ENST00000516635 111 ntBASIC2.28□□□□□ -2.04
NR1H2P55055 RNU6-988P-201ENST00000519081 107 ntBASIC2.28□□□□□ -2.04
NR1H2P55055 AC091144.1-201ENST00000519573 138 ntBASIC2.28□□□□□ -2.04
NR1H2P55055 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.28□□□□□ -2.04
NR1H2P55055 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.28□□□□□ -2.04
NR1H2P55055 AC125232.2-201ENST00000592457 143 ntBASIC2.28□□□□□ -2.04
NR1H2P55055 CTSLP2-204ENST00000629029 392 ntBASIC2.28□□□□□ -2.04
NR1H2P55055 AL606534.2-204ENST00000635008 178 ntBASIC2.28□□□□□ -2.04
NR1H2P55055 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
NR1H2P55055 Y_RNA.148-201ENST00000363557 117 ntBASIC2.27□□□□□ -2.05
NR1H2P55055 RNA5SP37-201ENST00000365420 130 ntBASIC2.27□□□□□ -2.05
NR1H2P55055 SNORA51.11-201ENST00000384442 131 ntBASIC2.27□□□□□ -2.05
NR1H2P55055 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
NR1H2P55055 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
NR1H2P55055 AL512604.1-201ENST00000404812 257 ntBASIC2.27□□□□□ -2.05
NR1H2P55055 MIR1283-1-201ENST00000408494 87 ntBASIC2.27□□□□□ -2.05
NR1H2P55055 RNA5SP450-201ENST00000411206 102 ntBASIC2.27□□□□□ -2.05
NR1H2P55055 RNU6-1001P-201ENST00000411265 100 ntBASIC2.27□□□□□ -2.05
NR1H2P55055 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.27□□□□□ -2.05
NR1H2P55055 AC104435.1-201ENST00000483483 166 ntBASIC2.27□□□□□ -2.05
NR1H2P55055 AC079804.2-201ENST00000490376 200 ntBASIC2.27□□□□□ -2.05
NR1H2P55055 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.27□□□□□ -2.05
NR1H2P55055 MIR2355-201ENST00000517199 87 ntBASIC2.27□□□□□ -2.05
NR1H2P55055 AC023442.1-201ENST00000531247 422 ntBASIC2.27□□□□□ -2.05
NR1H2P55055 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.27□□□□□ -2.05
NR1H2P55055 VN1R91P-201ENST00000594377 169 ntBASIC2.27□□□□□ -2.05
NR1H2P55055 SNORD58B-201ENST00000607313 66 ntBASIC2.27□□□□□ -2.05
NR1H2P55055 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.27□□□□□ -2.05
NR1H2P55055 AC010999.1-201ENST00000611856 324 ntBASIC2.27□□□□□ -2.05
NR1H2P55055 MIR6840-201ENST00000611937 71 ntBASIC2.27□□□□□ -2.05
NR1H2P55055 U4.3-201ENST00000621047 82 ntBASIC2.27□□□□□ -2.05
NR1H2P55055 MIR7843-201ENST00000622274 79 ntBASIC2.27□□□□□ -2.05
NR1H2P55055 AC064859.1-201ENST00000624741 174 ntBASIC2.27□□□□□ -2.05
NR1H2P55055 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
NR1H2P55055 RNU1-62P-201ENST00000362599 164 ntBASIC2.26□□□□□ -2.05
NR1H2P55055 RNA5SP361-201ENST00000362686 118 ntBASIC2.26□□□□□ -2.05
NR1H2P55055 RNU6-727P-201ENST00000363592 107 ntBASIC2.26□□□□□ -2.05
NR1H2P55055 Y_RNA.179-201ENST00000363844 90 ntBASIC2.26□□□□□ -2.05
NR1H2P55055 RNA5SP456-201ENST00000364002 114 ntBASIC2.26□□□□□ -2.05
NR1H2P55055 AL033519.2-201ENST00000403958 392 ntBASIC2.26□□□□□ -2.05
NR1H2P55055 AC009963.1-201ENST00000417265 157 ntBASIC2.26□□□□□ -2.05
NR1H2P55055 BX510359.4-201ENST00000423750 193 ntBASIC2.26□□□□□ -2.05
NR1H2P55055 AL357134.1-201ENST00000445848 426 ntBASIC2.26□□□□□ -2.05
NR1H2P55055 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.26□□□□□ -2.05
NR1H2P55055 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.26□□□□□ -2.05
NR1H2P55055 SNORA25.10-201ENST00000515926 124 ntBASIC2.26□□□□□ -2.05
NR1H2P55055 RNA5SP24-201ENST00000516478 95 ntBASIC2.26□□□□□ -2.05
NR1H2P55055 HSBP1P1-201ENST00000555205 166 ntBASIC2.26□□□□□ -2.05
NR1H2P55055 MZT1P2-201ENST00000604387 248 ntBASIC2.26□□□□□ -2.05
NR1H2P55055 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.26□□□□□ -2.05
NR1H2P55055 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
NR1H2P55055 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
NR1H2P55055 RNA5SP289-201ENST00000362332 137 ntBASIC2.25□□□□□ -2.05
NR1H2P55055 RNU6-545P-201ENST00000362681 104 ntBASIC2.25□□□□□ -2.05
NR1H2P55055 RNU6-1301P-201ENST00000362724 104 ntBASIC2.25□□□□□ -2.05
NR1H2P55055 Y_RNA.202-201ENST00000364083 110 ntBASIC2.25□□□□□ -2.05
NR1H2P55055 RNU6-793P-201ENST00000384233 104 ntBASIC2.25□□□□□ -2.05
NR1H2P55055 MIR329-1-201ENST00000385028 80 ntBASIC2.25□□□□□ -2.05
NR1H2P55055 MIR1283-2-201ENST00000408621 87 ntBASIC2.25□□□□□ -2.05
NR1H2P55055 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.25□□□□□ -2.05
NR1H2P55055 AL158823.1-201ENST00000418441 478 ntBASIC2.25□□□□□ -2.05
NR1H2P55055 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.25□□□□□ -2.05
NR1H2P55055 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.25□□□□□ -2.05
NR1H2P55055 Y_RNA.638-201ENST00000459374 113 ntBASIC2.25□□□□□ -2.05
NR1H2P55055 AC091179.3-201ENST00000474761 144 ntBASIC2.25□□□□□ -2.05
NR1H2P55055 AC090255.1-201ENST00000495779 349 ntBASIC2.25□□□□□ -2.05
NR1H2P55055 RNU6-948P-201ENST00000516374 107 ntBASIC2.25□□□□□ -2.05
NR1H2P55055 RNU6-911P-201ENST00000516523 104 ntBASIC2.25□□□□□ -2.05
NR1H2P55055 RNU1-117P-201ENST00000517041 158 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms