Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 RN7SL633P-201ENST00000488974 297 ntBASIC3.31□□□□□ -1.88
PMS1P54277 RNU6-1278P-201ENST00000516130 107 ntBASIC3.31□□□□□ -1.88
PMS1P54277 RN7SKP282-201ENST00000516824 299 ntBASIC3.31□□□□□ -1.88
PMS1P54277 RNU6-586P-201ENST00000517265 104 ntBASIC3.31□□□□□ -1.88
PMS1P54277 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.31□□□□□ -1.88
PMS1P54277 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PMS1P54277 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.31□□□□□ -1.88
PMS1P54277 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PMS1P54277 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.3□□□□□ -1.88
PMS1P54277 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PMS1P54277 SNORA63.1-201ENST00000362493 131 ntBASIC3.3□□□□□ -1.88
PMS1P54277 RNU6-944P-201ENST00000364023 107 ntBASIC3.3□□□□□ -1.88
PMS1P54277 MIR218-1-201ENST00000384999 110 ntBASIC3.3□□□□□ -1.88
PMS1P54277 MIR1283-1-201ENST00000408494 87 ntBASIC3.3□□□□□ -1.88
PMS1P54277 RPL30P4-201ENST00000429309 333 ntBASIC3.3□□□□□ -1.88
PMS1P54277 RPL27AP5-201ENST00000469428 449 ntBASIC3.3□□□□□ -1.88
PMS1P54277 RN7SL601P-201ENST00000471221 293 ntBASIC3.3□□□□□ -1.88
PMS1P54277 AP004217.1-201ENST00000480579 346 ntBASIC3.3□□□□□ -1.88
PMS1P54277 AC008885.1-201ENST00000514930 301 ntBASIC3.3□□□□□ -1.88
PMS1P54277 RNU6-789P-201ENST00000517105 102 ntBASIC3.3□□□□□ -1.88
PMS1P54277 AC136628.3-201ENST00000521868 290 ntBASIC3.3□□□□□ -1.88
PMS1P54277 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.3□□□□□ -1.88
PMS1P54277 MIR5004-201ENST00000579078 107 ntBASIC3.3□□□□□ -1.88
PMS1P54277 MIR3133-201ENST00000583157 78 ntBASIC3.3□□□□□ -1.88
PMS1P54277 MIR4753-201ENST00000585119 83 ntBASIC3.3□□□□□ -1.88
PMS1P54277 AL713866.2-201ENST00000603579 219 ntBASIC3.3□□□□□ -1.88
PMS1P54277 AL078604.3-201ENST00000615580 211 ntBASIC3.3□□□□□ -1.88
PMS1P54277 MIR7157-201ENST00000635801 60 ntBASIC3.3□□□□□ -1.88
PMS1P54277 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PMS1P54277 AL035425.3-201ENST00000564206 4996 ntBASIC3.3□□□□□ -1.88
PMS1P54277 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
PMS1P54277 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
PMS1P54277 FAM35CP-201ENST00000554755 2470 ntBASIC3.29□□□□□ -1.88
PMS1P54277 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
PMS1P54277 MIR22-201ENST00000362190 85 ntBASIC3.29□□□□□ -1.88
PMS1P54277 RNU1-72P-201ENST00000362976 153 ntBASIC3.29□□□□□ -1.88
PMS1P54277 RNU6-234P-201ENST00000365229 104 ntBASIC3.29□□□□□ -1.88
PMS1P54277 MIR1185-2-201ENST00000408687 86 ntBASIC3.29□□□□□ -1.88
PMS1P54277 RNU6-855P-201ENST00000410395 104 ntBASIC3.29□□□□□ -1.88
PMS1P54277 RNA5SP274-201ENST00000410484 108 ntBASIC3.29□□□□□ -1.88
PMS1P54277 RPS29P6-201ENST00000438196 145 ntBASIC3.29□□□□□ -1.88
PMS1P54277 AL392103.1-201ENST00000447000 198 ntBASIC3.29□□□□□ -1.88
PMS1P54277 PRSS3P4-201ENST00000453323 162 ntBASIC3.29□□□□□ -1.88
PMS1P54277 U8.19-201ENST00000459095 133 ntBASIC3.29□□□□□ -1.88
PMS1P54277 AC114982.1-201ENST00000469402 321 ntBASIC3.29□□□□□ -1.88
PMS1P54277 SEM1P1-201ENST00000506694 209 ntBASIC3.29□□□□□ -1.88
PMS1P54277 SNORA70.12-201ENST00000516084 153 ntBASIC3.29□□□□□ -1.88
PMS1P54277 RNU6-1219P-201ENST00000516143 112 ntBASIC3.29□□□□□ -1.88
PMS1P54277 Y_RNA.703-201ENST00000516846 111 ntBASIC3.29□□□□□ -1.88
PMS1P54277 RNA5SP380-201ENST00000517190 98 ntBASIC3.29□□□□□ -1.88
PMS1P54277 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.29□□□□□ -1.88
PMS1P54277 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.29□□□□□ -1.88
PMS1P54277 MIR3684-201ENST00000579779 74 ntBASIC3.29□□□□□ -1.88
PMS1P54277 MIR3199-1-201ENST00000582434 88 ntBASIC3.29□□□□□ -1.88
PMS1P54277 YPEL5P2-201ENST00000605553 359 ntBASIC3.29□□□□□ -1.88
PMS1P54277 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.29□□□□□ -1.88
PMS1P54277 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
PMS1P54277 RNU6-801P-201ENST00000364087 105 ntBASIC3.28□□□□□ -1.88
PMS1P54277 Y_RNA.287-201ENST00000364853 94 ntBASIC3.28□□□□□ -1.88
PMS1P54277 SNORD21-201ENST00000383953 95 ntBASIC3.28□□□□□ -1.88
PMS1P54277 MIR181B1-201ENST00000385240 110 ntBASIC3.28□□□□□ -1.88
PMS1P54277 RN7SKP220-201ENST00000410611 288 ntBASIC3.28□□□□□ -1.88
PMS1P54277 RNU6-1328P-201ENST00000410938 106 ntBASIC3.28□□□□□ -1.88
PMS1P54277 MICF-203ENST00000432679 129 ntBASIC3.28□□□□□ -1.88
PMS1P54277 AL135790.2-201ENST00000437701 267 ntBASIC3.28□□□□□ -1.88
PMS1P54277 SCARNA3-201ENST00000517097 143 ntBASIC3.28□□□□□ -1.88
PMS1P54277 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.28□□□□□ -1.88
PMS1P54277 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.28□□□□□ -1.88
PMS1P54277 MRPS18CP4-201ENST00000535821 231 ntBASIC3.28□□□□□ -1.88
PMS1P54277 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.28□□□□□ -1.88
PMS1P54277 MIR1254-2-201ENST00000579553 63 ntBASIC3.28□□□□□ -1.88
PMS1P54277 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.28□□□□□ -1.88
PMS1P54277 AC023043.3-201ENST00000593113 385 ntBASIC3.28□□□□□ -1.88
PMS1P54277 MIR6075-201ENST00000620782 95 ntBASIC3.28□□□□□ -1.88
PMS1P54277 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.28□□□□□ -1.88
PMS1P54277 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
PMS1P54277 AC010329.5-201ENST00000623497 2174 ntBASIC3.28□□□□□ -1.88
PMS1P54277 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
PMS1P54277 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.27□□□□□ -1.89
PMS1P54277 AC008264.2-201ENST00000610193 3731 ntBASIC3.27□□□□□ -1.89
PMS1P54277 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
PMS1P54277 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.27□□□□□ -1.89
PMS1P54277 RNU4-17P-201ENST00000365598 141 ntBASIC3.27□□□□□ -1.89
PMS1P54277 Y_RNA.571-201ENST00000384753 98 ntBASIC3.27□□□□□ -1.89
PMS1P54277 MIR7-3-201ENST00000384898 110 ntBASIC3.27□□□□□ -1.89
PMS1P54277 SNORA26.5-201ENST00000391215 123 ntBASIC3.27□□□□□ -1.89
PMS1P54277 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.27□□□□□ -1.89
PMS1P54277 AC006028.1-201ENST00000438379 402 ntBASIC3.27□□□□□ -1.89
PMS1P54277 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.27□□□□□ -1.89
PMS1P54277 AC009969.1-201ENST00000438726 172 ntBASIC3.27□□□□□ -1.89
PMS1P54277 BX510359.1-201ENST00000456973 237 ntBASIC3.27□□□□□ -1.89
PMS1P54277 RNU7-57P-201ENST00000459540 60 ntBASIC3.27□□□□□ -1.89
PMS1P54277 AC091021.1-201ENST00000468051 388 ntBASIC3.27□□□□□ -1.89
PMS1P54277 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3.27□□□□□ -1.89
PMS1P54277 AC109329.2-201ENST00000519658 482 ntBASIC3.27□□□□□ -1.89
PMS1P54277 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.27□□□□□ -1.89
PMS1P54277 AC105245.1-201ENST00000581934 244 ntBASIC3.27□□□□□ -1.89
PMS1P54277 AC021753.1-201ENST00000635724 168 ntBASIC3.27□□□□□ -1.89
PMS1P54277 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.27□□□□□ -1.89
PMS1P54277 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms