Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 MIR329-1-201ENST00000385028 80 ntBASIC2.62□□□□□ -1.99
COPAP53621 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
COPAP53621 Y_RNA.595-201ENST00000410403 105 ntBASIC2.62□□□□□ -1.99
COPAP53621 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.62□□□□□ -1.99
COPAP53621 AC009238.1-201ENST00000442165 424 ntBASIC2.62□□□□□ -1.99
COPAP53621 AC010095.1-201ENST00000443543 144 ntBASIC2.62□□□□□ -1.99
COPAP53621 AC073910.1-201ENST00000445047 438 ntBASIC2.62□□□□□ -1.99
COPAP53621 AC009237.6-201ENST00000446969 424 ntBASIC2.62□□□□□ -1.99
COPAP53621 RNU6-1012P-201ENST00000516606 109 ntBASIC2.62□□□□□ -1.99
COPAP53621 SNORA40.15-201ENST00000516884 107 ntBASIC2.62□□□□□ -1.99
COPAP53621 CYCSP23-201ENST00000519781 313 ntBASIC2.62□□□□□ -1.99
COPAP53621 Y_RNA.772-201ENST00000606692 102 ntBASIC2.62□□□□□ -1.99
COPAP53621 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.61□□□□□ -1.99
COPAP53621 Y_RNA.149-201ENST00000363558 117 ntBASIC2.61□□□□□ -1.99
COPAP53621 Y_RNA.176-201ENST00000363815 109 ntBASIC2.61□□□□□ -1.99
COPAP53621 Y_RNA.439-201ENST00000384119 94 ntBASIC2.61□□□□□ -1.99
COPAP53621 Y_RNA.458-201ENST00000384240 102 ntBASIC2.61□□□□□ -1.99
COPAP53621 RNU6-1145P-201ENST00000384246 107 ntBASIC2.61□□□□□ -1.99
COPAP53621 MIR548F4-201ENST00000408515 105 ntBASIC2.61□□□□□ -1.99
COPAP53621 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.61□□□□□ -1.99
COPAP53621 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.61□□□□□ -1.99
COPAP53621 RPEP5-201ENST00000441137 268 ntBASIC2.61□□□□□ -1.99
COPAP53621 AC009237.7-201ENST00000447357 229 ntBASIC2.61□□□□□ -1.99
COPAP53621 RNU7-14P-201ENST00000459331 62 ntBASIC2.61□□□□□ -1.99
COPAP53621 AC010655.3-201ENST00000478818 450 ntBASIC2.61□□□□□ -1.99
COPAP53621 RNU6-397P-201ENST00000516226 104 ntBASIC2.61□□□□□ -1.99
COPAP53621 RNA5SP320-201ENST00000516263 124 ntBASIC2.61□□□□□ -1.99
COPAP53621 RNU6-635P-201ENST00000516651 102 ntBASIC2.61□□□□□ -1.99
COPAP53621 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.61□□□□□ -1.99
COPAP53621 MIR4659A-201ENST00000580269 81 ntBASIC2.61□□□□□ -1.99
COPAP53621 PRR13P7-201ENST00000605538 430 ntBASIC2.61□□□□□ -1.99
COPAP53621 AC240442.1-201ENST00000616055 283 ntBASIC2.61□□□□□ -1.99
COPAP53621 AL590808.1-201ENST00000618696 141 ntBASIC2.61□□□□□ -1.99
COPAP53621 MIR1248-201ENST00000629190 106 ntBASIC2.61□□□□□ -1.99
COPAP53621 MTND5P35-201ENST00000557537 1720 ntBASIC2.61□□□□□ -1.99
COPAP53621 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
COPAP53621 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.6□□□□□ -1.99
COPAP53621 Y_RNA.133-201ENST00000363428 110 ntBASIC2.6□□□□□ -1.99
COPAP53621 RNU6-727P-201ENST00000363592 107 ntBASIC2.6□□□□□ -1.99
COPAP53621 SNORA25B-201ENST00000365507 128 ntBASIC2.6□□□□□ -1.99
COPAP53621 RNU6-1026P-201ENST00000384465 108 ntBASIC2.6□□□□□ -1.99
COPAP53621 MIR518C-201ENST00000384822 101 ntBASIC2.6□□□□□ -1.99
COPAP53621 RNA5SP210-201ENST00000391034 120 ntBASIC2.6□□□□□ -1.99
COPAP53621 AL033519.2-201ENST00000403958 392 ntBASIC2.6□□□□□ -1.99
COPAP53621 IPO7P1-201ENST00000442031 636 ntBASIC2.6□□□□□ -1.99
COPAP53621 AC008413.1-201ENST00000511864 177 ntBASIC2.6□□□□□ -1.99
COPAP53621 AC067942.3-201ENST00000512025 362 ntBASIC2.6□□□□□ -1.99
COPAP53621 RNU6-667P-201ENST00000517186 102 ntBASIC2.6□□□□□ -1.99
COPAP53621 AC121758.2-201ENST00000553271 193 ntBASIC2.6□□□□□ -1.99
COPAP53621 RAC1P9-201ENST00000604990 392 ntBASIC2.6□□□□□ -1.99
COPAP53621 MIR6895-201ENST00000613497 78 ntBASIC2.6□□□□□ -1.99
COPAP53621 AC011476.5-201ENST00000615594 130 ntBASIC2.6□□□□□ -1.99
COPAP53621 AC010205.1-201ENST00000616668 449 ntBASIC2.6□□□□□ -1.99
COPAP53621 CTSLP2-204ENST00000629029 392 ntBASIC2.6□□□□□ -1.99
COPAP53621 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.6□□□□□ -1.99
COPAP53621 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
COPAP53621 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
COPAP53621 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
COPAP53621 Y_RNA.276-201ENST00000364732 109 ntBASIC2.59□□□□□ -1.99
COPAP53621 MIR27B-201ENST00000385129 97 ntBASIC2.59□□□□□ -1.99
COPAP53621 MRPL35P1-201ENST00000404272 572 ntBASIC2.59□□□□□ -1.99
COPAP53621 RNA5SP181-201ENST00000410246 98 ntBASIC2.59□□□□□ -1.99
COPAP53621 AC004866.1-201ENST00000411748 78 ntBASIC2.59□□□□□ -1.99
COPAP53621 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.59□□□□□ -1.99
COPAP53621 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.59□□□□□ -1.99
COPAP53621 UQCRBP2-201ENST00000447827 297 ntBASIC2.59□□□□□ -1.99
COPAP53621 AC007395.1-201ENST00000451333 677 ntBASIC2.59□□□□□ -1.99
COPAP53621 PCNPP5-201ENST00000452246 481 ntBASIC2.59□□□□□ -1.99
COPAP53621 AC091179.3-201ENST00000474761 144 ntBASIC2.59□□□□□ -1.99
COPAP53621 TRBV12-1-201ENST00000479785 344 ntBASIC2.59□□□□□ -1.99
COPAP53621 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.59□□□□□ -1.99
COPAP53621 RNU1-41P-201ENST00000516161 162 ntBASIC2.59□□□□□ -1.99
COPAP53621 RNU1-48P-201ENST00000516400 162 ntBASIC2.59□□□□□ -1.99
COPAP53621 RNU6-344P-201ENST00000516635 111 ntBASIC2.59□□□□□ -1.99
COPAP53621 RNU1-117P-201ENST00000517041 158 ntBASIC2.59□□□□□ -1.99
COPAP53621 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.59□□□□□ -1.99
COPAP53621 MIR5092-201ENST00000583139 88 ntBASIC2.59□□□□□ -1.99
COPAP53621 MZT1P2-201ENST00000604387 248 ntBASIC2.59□□□□□ -1.99
COPAP53621 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
COPAP53621 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.59□□□□□ -2
COPAP53621 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
COPAP53621 AP006437.1-201ENST00000641440 3685 ntBASIC2.58□□□□□ -2
COPAP53621 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.58□□□□□ -2
COPAP53621 RNU6-238P-201ENST00000363313 106 ntBASIC2.58□□□□□ -2
COPAP53621 SNORA3A-201ENST00000364113 130 ntBASIC2.58□□□□□ -2
COPAP53621 RNU6-611P-201ENST00000384276 104 ntBASIC2.58□□□□□ -2
COPAP53621 AL357139.1-201ENST00000407792 426 ntBASIC2.58□□□□□ -2
COPAP53621 MIR1302-3-201ENST00000408128 138 ntBASIC2.58□□□□□ -2
COPAP53621 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
COPAP53621 AC018868.1-201ENST00000491307 315 ntBASIC2.58□□□□□ -2
COPAP53621 RNU6-1143P-201ENST00000516125 104 ntBASIC2.58□□□□□ -2
COPAP53621 RNY3P15-201ENST00000516297 97 ntBASIC2.58□□□□□ -2
COPAP53621 RNU6-897P-201ENST00000517135 105 ntBASIC2.58□□□□□ -2
COPAP53621 RNA5SP490-201ENST00000517141 136 ntBASIC2.58□□□□□ -2
COPAP53621 MIR3124-201ENST00000582636 67 ntBASIC2.58□□□□□ -2
COPAP53621 AC078899.2-201ENST00000595282 212 ntBASIC2.58□□□□□ -2
COPAP53621 SNORD11B-201ENST00000607707 90 ntBASIC2.58□□□□□ -2
COPAP53621 AC012640.5-201ENST00000623897 319 ntBASIC2.58□□□□□ -2
COPAP53621 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
COPAP53621 Y_RNA.183-201ENST00000363882 113 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms