Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.97□□□□□ -2.09
PDX1P52945 AC026271.5-201ENST00000577873 130 ntBASIC1.97□□□□□ -2.09
PDX1P52945 SNRPGP20-201ENST00000604477 205 ntBASIC1.97□□□□□ -2.09
PDX1P52945 AC080078.3-201ENST00000605407 463 ntBASIC1.97□□□□□ -2.09
PDX1P52945 Y_RNA.783-201ENST00000613546 102 ntBASIC1.97□□□□□ -2.09
PDX1P52945 AC087588.2-201ENST00000617667 426 ntBASIC1.97□□□□□ -2.09
PDX1P52945 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.97□□□□□ -2.09
PDX1P52945 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.97□□□□□ -2.09
PDX1P52945 AC006026.1-201ENST00000444025 1803 ntBASIC1.96□□□□□ -2.1
PDX1P52945 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.96□□□□□ -2.1
PDX1P52945 Y_RNA.99-201ENST00000363138 105 ntBASIC1.96□□□□□ -2.1
PDX1P52945 RNU6-727P-201ENST00000363592 107 ntBASIC1.96□□□□□ -2.1
PDX1P52945 Y_RNA.187-201ENST00000363918 113 ntBASIC1.96□□□□□ -2.1
PDX1P52945 Y_RNA.358-201ENST00000365491 99 ntBASIC1.96□□□□□ -2.1
PDX1P52945 Y_RNA.364-201ENST00000365532 101 ntBASIC1.96□□□□□ -2.1
PDX1P52945 Y_RNA.463-201ENST00000384271 102 ntBASIC1.96□□□□□ -2.1
PDX1P52945 Y_RNA.496-201ENST00000384444 101 ntBASIC1.96□□□□□ -2.1
PDX1P52945 RNU6-1026P-201ENST00000384465 108 ntBASIC1.96□□□□□ -2.1
PDX1P52945 Y_RNA.535-201ENST00000384612 99 ntBASIC1.96□□□□□ -2.1
PDX1P52945 Y_RNA.577-201ENST00000384794 101 ntBASIC1.96□□□□□ -2.1
PDX1P52945 MIR524-201ENST00000385242 87 ntBASIC1.96□□□□□ -2.1
PDX1P52945 RNU6-1156P-201ENST00000410365 100 ntBASIC1.96□□□□□ -2.1
PDX1P52945 RNU6-1001P-201ENST00000411265 100 ntBASIC1.96□□□□□ -2.1
PDX1P52945 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.96□□□□□ -2.1
PDX1P52945 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.96□□□□□ -2.1
PDX1P52945 AC010531.2-201ENST00000465012 153 ntBASIC1.96□□□□□ -2.1
PDX1P52945 HMGN2P9-201ENST00000476875 229 ntBASIC1.96□□□□□ -2.1
PDX1P52945 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.96□□□□□ -2.1
PDX1P52945 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.96□□□□□ -2.1
PDX1P52945 AC009127.3-201ENST00000570531 403 ntBASIC1.96□□□□□ -2.1
PDX1P52945 AC090617.3-201ENST00000573670 475 ntBASIC1.96□□□□□ -2.1
PDX1P52945 RPL17P51-201ENST00000605218 238 ntBASIC1.96□□□□□ -2.1
PDX1P52945 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.96□□□□□ -2.1
PDX1P52945 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.95□□□□□ -2.1
PDX1P52945 RNA5SP361-201ENST00000362686 118 ntBASIC1.95□□□□□ -2.1
PDX1P52945 RNU1-17P-201ENST00000363022 152 ntBASIC1.95□□□□□ -2.1
PDX1P52945 RNU6-797P-201ENST00000363101 109 ntBASIC1.95□□□□□ -2.1
PDX1P52945 Y_RNA.146-201ENST00000363549 102 ntBASIC1.95□□□□□ -2.1
PDX1P52945 RNU6-137P-201ENST00000363680 108 ntBASIC1.95□□□□□ -2.1
PDX1P52945 SNORD114-6-201ENST00000364393 72 ntBASIC1.95□□□□□ -2.1
PDX1P52945 RNU6-245P-201ENST00000384020 107 ntBASIC1.95□□□□□ -2.1
PDX1P52945 SNORA67.2-201ENST00000384300 149 ntBASIC1.95□□□□□ -2.1
PDX1P52945 Y_RNA.557-201ENST00000384680 107 ntBASIC1.95□□□□□ -2.1
PDX1P52945 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.95□□□□□ -2.1
PDX1P52945 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.95□□□□□ -2.1
PDX1P52945 MIR1283-1-201ENST00000408494 87 ntBASIC1.95□□□□□ -2.1
PDX1P52945 MIR1283-2-201ENST00000408621 87 ntBASIC1.95□□□□□ -2.1
PDX1P52945 BX510359.4-201ENST00000423750 193 ntBASIC1.95□□□□□ -2.1
PDX1P52945 HMGN2P38-201ENST00000423806 265 ntBASIC1.95□□□□□ -2.1
PDX1P52945 AC139712.2-201ENST00000424302 339 ntBASIC1.95□□□□□ -2.1
PDX1P52945 EIF1P2-201ENST00000428233 350 ntBASIC1.95□□□□□ -2.1
PDX1P52945 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.95□□□□□ -2.1
PDX1P52945 Y_RNA.676-201ENST00000516393 96 ntBASIC1.95□□□□□ -2.1
PDX1P52945 RNU1-117P-201ENST00000517041 158 ntBASIC1.95□□□□□ -2.1
PDX1P52945 RNU6-264P-201ENST00000517134 104 ntBASIC1.95□□□□□ -2.1
PDX1P52945 RRN3P3-201ENST00000549207 578 ntBASIC1.95□□□□□ -2.1
PDX1P52945 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.95□□□□□ -2.1
PDX1P52945 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.95□□□□□ -2.1
PDX1P52945 AP000942.3-201ENST00000603702 160 ntBASIC1.95□□□□□ -2.1
PDX1P52945 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.95□□□□□ -2.1
PDX1P52945 AL359314.1-201ENST00000616913 261 ntBASIC1.95□□□□□ -2.1
PDX1P52945 AC008873.1-201ENST00000625051 138 ntBASIC1.95□□□□□ -2.1
PDX1P52945 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.95□□□□□ -2.1
PDX1P52945 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
PDX1P52945 AC073544.1-201ENST00000600110 1595 ntBASIC1.94□□□□□ -2.1
PDX1P52945 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.94□□□□□ -2.1
PDX1P52945 AL596028.1-201ENST00000326971 197 ntBASIC1.94□□□□□ -2.1
PDX1P52945 SNORA16B-201ENST00000364674 135 ntBASIC1.94□□□□□ -2.1
PDX1P52945 SNORD87-201ENST00000364849 89 ntBASIC1.94□□□□□ -2.1
PDX1P52945 RNA5SP160-201ENST00000364866 120 ntBASIC1.94□□□□□ -2.1
PDX1P52945 RNU6-438P-201ENST00000365561 103 ntBASIC1.94□□□□□ -2.1
PDX1P52945 Y_RNA.415-201ENST00000384012 112 ntBASIC1.94□□□□□ -2.1
PDX1P52945 MIR518A2-201ENST00000384966 87 ntBASIC1.94□□□□□ -2.1
PDX1P52945 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.94□□□□□ -2.1
PDX1P52945 AC123900.1-201ENST00000420390 96 ntBASIC1.94□□□□□ -2.1
PDX1P52945 RPL23AP7-203ENST00000449021 469 ntBASIC1.94□□□□□ -2.1
PDX1P52945 CHEK2P4-201ENST00000450340 246 ntBASIC1.94□□□□□ -2.1
PDX1P52945 AL021397.1-201ENST00000451806 248 ntBASIC1.94□□□□□ -2.1
PDX1P52945 AC027575.1-201ENST00000481064 460 ntBASIC1.94□□□□□ -2.1
PDX1P52945 AC090255.1-201ENST00000495779 349 ntBASIC1.94□□□□□ -2.1
PDX1P52945 RNU6-344P-201ENST00000516635 111 ntBASIC1.94□□□□□ -2.1
PDX1P52945 RNU6-1198P-201ENST00000516904 67 ntBASIC1.94□□□□□ -2.1
PDX1P52945 AC093023.1-201ENST00000547375 507 ntBASIC1.94□□□□□ -2.1
PDX1P52945 AC110588.1-201ENST00000559699 137 ntBASIC1.94□□□□□ -2.1
PDX1P52945 MZT1P2-201ENST00000604387 248 ntBASIC1.94□□□□□ -2.1
PDX1P52945 MIR6840-201ENST00000611937 71 ntBASIC1.94□□□□□ -2.1
PDX1P52945 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.94□□□□□ -2.1
PDX1P52945 AL590240.4-201ENST00000616908 390 ntBASIC1.94□□□□□ -2.1
PDX1P52945 AC012640.5-201ENST00000623897 319 ntBASIC1.94□□□□□ -2.1
PDX1P52945 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
PDX1P52945 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
PDX1P52945 RNU6-490P-201ENST00000362985 107 ntBASIC1.93□□□□□ -2.1
PDX1P52945 RNU6-281P-201ENST00000384212 103 ntBASIC1.93□□□□□ -2.1
PDX1P52945 MIR583-201ENST00000384846 75 ntBASIC1.93□□□□□ -2.1
PDX1P52945 MIR597-201ENST00000384968 97 ntBASIC1.93□□□□□ -2.1
PDX1P52945 SNORD23.1-201ENST00000408212 104 ntBASIC1.93□□□□□ -2.1
PDX1P52945 MIR320B2-201ENST00000408479 138 ntBASIC1.93□□□□□ -2.1
PDX1P52945 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.93□□□□□ -2.1
PDX1P52945 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.93□□□□□ -2.1
PDX1P52945 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 223 ms