Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 RNU6-26P-201ENST00000383985 107 ntBASIC2.2□□□□□ -2.06
CLCNKAP51800 RNU6-546P-201ENST00000383991 107 ntBASIC2.2□□□□□ -2.06
CLCNKAP51800 RNU6-639P-201ENST00000384074 107 ntBASIC2.2□□□□□ -2.06
CLCNKAP51800 Y_RNA.527-201ENST00000384573 102 ntBASIC2.2□□□□□ -2.06
CLCNKAP51800 MIR221-201ENST00000385135 110 ntBASIC2.2□□□□□ -2.06
CLCNKAP51800 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.2□□□□□ -2.06
CLCNKAP51800 AL118496.2-201ENST00000448300 230 ntBASIC2.2□□□□□ -2.06
CLCNKAP51800 AC091179.3-201ENST00000474761 144 ntBASIC2.2□□□□□ -2.06
CLCNKAP51800 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.2□□□□□ -2.06
CLCNKAP51800 AC018868.1-201ENST00000491307 315 ntBASIC2.2□□□□□ -2.06
CLCNKAP51800 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.2□□□□□ -2.06
CLCNKAP51800 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.2□□□□□ -2.06
CLCNKAP51800 RNU6-475P-201ENST00000516073 104 ntBASIC2.2□□□□□ -2.06
CLCNKAP51800 SNORA40.14-201ENST00000516543 86 ntBASIC2.2□□□□□ -2.06
CLCNKAP51800 RNU2-44P-201ENST00000516795 194 ntBASIC2.2□□□□□ -2.06
CLCNKAP51800 AC023442.1-201ENST00000531247 422 ntBASIC2.2□□□□□ -2.06
CLCNKAP51800 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.2□□□□□ -2.06
CLCNKAP51800 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.2□□□□□ -2.06
CLCNKAP51800 AL442163.3-201ENST00000554110 156 ntBASIC2.2□□□□□ -2.06
CLCNKAP51800 MIR3126-201ENST00000577443 74 ntBASIC2.2□□□□□ -2.06
CLCNKAP51800 MIR5006-201ENST00000583027 110 ntBASIC2.2□□□□□ -2.06
CLCNKAP51800 SNRPGP20-201ENST00000604477 205 ntBASIC2.2□□□□□ -2.06
CLCNKAP51800 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.2□□□□□ -2.06
CLCNKAP51800 AC009831.4-201ENST00000620744 325 ntBASIC2.2□□□□□ -2.06
CLCNKAP51800 MIR6873-201ENST00000622788 63 ntBASIC2.2□□□□□ -2.06
CLCNKAP51800 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.19□□□□□ -2.06
CLCNKAP51800 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CLCNKAP51800 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
CLCNKAP51800 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
CLCNKAP51800 Y_RNA.158-201ENST00000363651 101 ntBASIC2.19□□□□□ -2.06
CLCNKAP51800 RNU6-280P-201ENST00000364145 104 ntBASIC2.19□□□□□ -2.06
CLCNKAP51800 RNU6-234P-201ENST00000365229 104 ntBASIC2.19□□□□□ -2.06
CLCNKAP51800 RNU1-148P-201ENST00000384472 162 ntBASIC2.19□□□□□ -2.06
CLCNKAP51800 SNORA48.3-201ENST00000391081 134 ntBASIC2.19□□□□□ -2.06
CLCNKAP51800 AC113618.1-201ENST00000416747 285 ntBASIC2.19□□□□□ -2.06
CLCNKAP51800 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.19□□□□□ -2.06
CLCNKAP51800 AC010095.1-201ENST00000443543 144 ntBASIC2.19□□□□□ -2.06
CLCNKAP51800 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.19□□□□□ -2.06
CLCNKAP51800 AC079804.2-201ENST00000490376 200 ntBASIC2.19□□□□□ -2.06
CLCNKAP51800 ATP5EP1-201ENST00000510257 156 ntBASIC2.19□□□□□ -2.06
CLCNKAP51800 RNU6-911P-201ENST00000516523 104 ntBASIC2.19□□□□□ -2.06
CLCNKAP51800 RNU5F-4P-201ENST00000516581 114 ntBASIC2.19□□□□□ -2.06
CLCNKAP51800 RNU7-193P-201ENST00000516723 65 ntBASIC2.19□□□□□ -2.06
CLCNKAP51800 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.19□□□□□ -2.06
CLCNKAP51800 AC040926.1-201ENST00000530195 238 ntBASIC2.19□□□□□ -2.06
CLCNKAP51800 AC022616.8-201ENST00000533569 253 ntBASIC2.19□□□□□ -2.06
CLCNKAP51800 MZT1P2-201ENST00000604387 248 ntBASIC2.19□□□□□ -2.06
CLCNKAP51800 TCL6_2.1-201ENST00000615162 119 ntBASIC2.19□□□□□ -2.06
CLCNKAP51800 AL138825.1-201ENST00000618587 192 ntBASIC2.19□□□□□ -2.06
CLCNKAP51800 AL162373.1-201ENST00000620433 407 ntBASIC2.19□□□□□ -2.06
CLCNKAP51800 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
CLCNKAP51800 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CLCNKAP51800 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CLCNKAP51800 ZNF720P1-201ENST00000562403 1939 ntBASIC2.19□□□□□ -2.06
CLCNKAP51800 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
CLCNKAP51800 RNU1-76P-201ENST00000362903 159 ntBASIC2.18□□□□□ -2.06
CLCNKAP51800 U8.2-201ENST00000363156 134 ntBASIC2.18□□□□□ -2.06
CLCNKAP51800 RNU6-245P-201ENST00000384020 107 ntBASIC2.18□□□□□ -2.06
CLCNKAP51800 SNORA51.11-201ENST00000384442 131 ntBASIC2.18□□□□□ -2.06
CLCNKAP51800 MIR606-201ENST00000384851 96 ntBASIC2.18□□□□□ -2.06
CLCNKAP51800 MIR329-1-201ENST00000385028 80 ntBASIC2.18□□□□□ -2.06
CLCNKAP51800 MIR320B2-201ENST00000408479 138 ntBASIC2.18□□□□□ -2.06
CLCNKAP51800 RNU2-48P-201ENST00000410694 191 ntBASIC2.18□□□□□ -2.06
CLCNKAP51800 OOSP1P1-201ENST00000423265 274 ntBASIC2.18□□□□□ -2.06
CLCNKAP51800 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.18□□□□□ -2.06
CLCNKAP51800 AC009237.7-201ENST00000447357 229 ntBASIC2.18□□□□□ -2.06
CLCNKAP51800 AC010469.2-201ENST00000496412 480 ntBASIC2.18□□□□□ -2.06
CLCNKAP51800 MIR2355-201ENST00000517199 87 ntBASIC2.18□□□□□ -2.06
CLCNKAP51800 AC091144.1-201ENST00000519573 138 ntBASIC2.18□□□□□ -2.06
CLCNKAP51800 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.18□□□□□ -2.06
CLCNKAP51800 MIR4648-201ENST00000580107 72 ntBASIC2.18□□□□□ -2.06
CLCNKAP51800 AC006504.6-201ENST00000590142 199 ntBASIC2.18□□□□□ -2.06
CLCNKAP51800 AC007229.1-201ENST00000590455 412 ntBASIC2.18□□□□□ -2.06
CLCNKAP51800 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.18□□□□□ -2.06
CLCNKAP51800 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.18□□□□□ -2.06
CLCNKAP51800 AC010999.1-201ENST00000611856 324 ntBASIC2.18□□□□□ -2.06
CLCNKAP51800 Y_RNA.179-201ENST00000363844 90 ntBASIC2.17□□□□□ -2.06
CLCNKAP51800 SNORA63C-201ENST00000364578 129 ntBASIC2.17□□□□□ -2.06
CLCNKAP51800 SNORA25B-201ENST00000365507 128 ntBASIC2.17□□□□□ -2.06
CLCNKAP51800 SNORD14.1-201ENST00000365609 90 ntBASIC2.17□□□□□ -2.06
CLCNKAP51800 AC117470.1-201ENST00000381974 330 ntBASIC2.17□□□□□ -2.06
CLCNKAP51800 Y_RNA.389-201ENST00000383924 113 ntBASIC2.17□□□□□ -2.06
CLCNKAP51800 Y_RNA.424-201ENST00000384063 103 ntBASIC2.17□□□□□ -2.06
CLCNKAP51800 RNU6-926P-201ENST00000384075 107 ntBASIC2.17□□□□□ -2.06
CLCNKAP51800 RNU6-793P-201ENST00000384233 104 ntBASIC2.17□□□□□ -2.06
CLCNKAP51800 RNY3P4-201ENST00000384428 101 ntBASIC2.17□□□□□ -2.06
CLCNKAP51800 MIR561-201ENST00000385216 97 ntBASIC2.17□□□□□ -2.06
CLCNKAP51800 RNU6-823P-201ENST00000391042 103 ntBASIC2.17□□□□□ -2.06
CLCNKAP51800 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.17□□□□□ -2.06
CLCNKAP51800 MTCO3P19-201ENST00000415864 321 ntBASIC2.17□□□□□ -2.06
CLCNKAP51800 AC009238.1-201ENST00000442165 424 ntBASIC2.17□□□□□ -2.06
CLCNKAP51800 AC009237.6-201ENST00000446969 424 ntBASIC2.17□□□□□ -2.06
CLCNKAP51800 RNU7-14P-201ENST00000459331 62 ntBASIC2.17□□□□□ -2.06
CLCNKAP51800 RNU1-117P-201ENST00000517041 158 ntBASIC2.17□□□□□ -2.06
CLCNKAP51800 RNU6-667P-201ENST00000517186 102 ntBASIC2.17□□□□□ -2.06
CLCNKAP51800 MIR4529-201ENST00000578110 78 ntBASIC2.17□□□□□ -2.06
CLCNKAP51800 AL360085.1-201ENST00000604713 532 ntBASIC2.17□□□□□ -2.06
CLCNKAP51800 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.17□□□□□ -2.06
CLCNKAP51800 AL357075.2-201ENST00000614906 189 ntBASIC2.17□□□□□ -2.06
CLCNKAP51800 AC011476.5-201ENST00000615594 130 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms