Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.8□□□□□ -1.64
PRIM1P49642 AC010733.2-201ENST00000589496 5702 ntBASIC4.8□□□□□ -1.64
PRIM1P49642 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
PRIM1P49642 snoU2_19.1-201ENST00000362361 80 ntBASIC4.8□□□□□ -1.64
PRIM1P49642 SNORD65B-201ENST00000459126 73 ntBASIC4.8□□□□□ -1.64
PRIM1P49642 MIR2114-201ENST00000516645 80 ntBASIC4.8□□□□□ -1.64
PRIM1P49642 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.8□□□□□ -1.64
PRIM1P49642 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.8□□□□□ -1.64
PRIM1P49642 uc_338.28-201ENST00000612082 187 ntBASIC4.8□□□□□ -1.64
PRIM1P49642 MIR8057-201ENST00000620957 69 ntBASIC4.8□□□□□ -1.64
PRIM1P49642 5S_rRNA.13-201ENST00000622298 123 ntBASIC4.8□□□□□ -1.64
PRIM1P49642 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.8□□□□□ -1.64
PRIM1P49642 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PRIM1P49642 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
PRIM1P49642 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
PRIM1P49642 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PRIM1P49642 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PRIM1P49642 AL356292.1-201ENST00000283110 373 ntBASIC4.79□□□□□ -1.64
PRIM1P49642 AC063976.3-201ENST00000426849 329 ntBASIC4.79□□□□□ -1.64
PRIM1P49642 AC017083.1-201ENST00000428093 483 ntBASIC4.79□□□□□ -1.64
PRIM1P49642 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC4.79□□□□□ -1.64
PRIM1P49642 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC4.79□□□□□ -1.64
PRIM1P49642 RPL30P14-201ENST00000482744 348 ntBASIC4.79□□□□□ -1.64
PRIM1P49642 RNU6-781P-201ENST00000516377 101 ntBASIC4.79□□□□□ -1.64
PRIM1P49642 GNRHR2P1-201ENST00000555315 631 ntBASIC4.79□□□□□ -1.64
PRIM1P49642 AC008739.2-201ENST00000597006 317 ntBASIC4.79□□□□□ -1.64
PRIM1P49642 AL022345.2-201ENST00000606307 135 ntBASIC4.79□□□□□ -1.64
PRIM1P49642 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC4.79□□□□□ -1.64
PRIM1P49642 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
PRIM1P49642 SCARNA15.3-201ENST00000626315 122 ntBASIC4.79□□□□□ -1.64
PRIM1P49642 SCARNA4.1-201ENST00000628597 123 ntBASIC4.79□□□□□ -1.64
PRIM1P49642 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
PRIM1P49642 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PRIM1P49642 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PRIM1P49642 MIR891A-201ENST00000401237 79 ntBASIC4.78□□□□□ -1.64
PRIM1P49642 AL139095.1-201ENST00000404326 391 ntBASIC4.78□□□□□ -1.64
PRIM1P49642 AC008134.1-201ENST00000420943 193 ntBASIC4.78□□□□□ -1.64
PRIM1P49642 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.78□□□□□ -1.64
PRIM1P49642 AC010531.2-201ENST00000465012 153 ntBASIC4.78□□□□□ -1.64
PRIM1P49642 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC4.78□□□□□ -1.64
PRIM1P49642 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.78□□□□□ -1.64
PRIM1P49642 RNU2-27P-201ENST00000516185 142 ntBASIC4.78□□□□□ -1.64
PRIM1P49642 RNU6-113P-201ENST00000516653 101 ntBASIC4.78□□□□□ -1.64
PRIM1P49642 AL365205.2-201ENST00000594586 68 ntBASIC4.78□□□□□ -1.64
PRIM1P49642 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PRIM1P49642 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PRIM1P49642 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PRIM1P49642 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.78□□□□□ -1.64
PRIM1P49642 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.77□□□□□ -1.65
PRIM1P49642 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.77□□□□□ -1.65
PRIM1P49642 RNU6-309P-201ENST00000364573 106 ntBASIC4.77□□□□□ -1.65
PRIM1P49642 RNU6-1138P-201ENST00000365359 106 ntBASIC4.77□□□□□ -1.65
PRIM1P49642 RNU6-106P-201ENST00000384405 107 ntBASIC4.77□□□□□ -1.65
PRIM1P49642 RNA5SP136-201ENST00000410906 107 ntBASIC4.77□□□□□ -1.65
PRIM1P49642 DBIP2-201ENST00000419076 262 ntBASIC4.77□□□□□ -1.65
PRIM1P49642 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC4.77□□□□□ -1.65
PRIM1P49642 AF228730.3-201ENST00000436691 102 ntBASIC4.77□□□□□ -1.65
PRIM1P49642 AC025518.1-201ENST00000479856 347 ntBASIC4.77□□□□□ -1.65
PRIM1P49642 RPL36AP48-201ENST00000485521 314 ntBASIC4.77□□□□□ -1.65
PRIM1P49642 RNU6-1098P-201ENST00000516772 96 ntBASIC4.77□□□□□ -1.65
PRIM1P49642 MIR486-1-201ENST00000612171 68 ntBASIC4.77□□□□□ -1.65
PRIM1P49642 AC002076.2-201ENST00000617362 122 ntBASIC4.77□□□□□ -1.65
PRIM1P49642 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
PRIM1P49642 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PRIM1P49642 UBE3AP2-201ENST00000429033 2259 ntBASIC4.77□□□□□ -1.65
PRIM1P49642 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PRIM1P49642 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PRIM1P49642 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.77□□□□□ -1.65
PRIM1P49642 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.76□□□□□ -1.65
PRIM1P49642 RNU6-766P-201ENST00000362478 107 ntBASIC4.76□□□□□ -1.65
PRIM1P49642 Y_RNA.203-201ENST00000364106 102 ntBASIC4.76□□□□□ -1.65
PRIM1P49642 RNU6-1113P-201ENST00000384348 107 ntBASIC4.76□□□□□ -1.65
PRIM1P49642 SNORA12.1-201ENST00000390873 148 ntBASIC4.76□□□□□ -1.65
PRIM1P49642 RNA5SP424-201ENST00000390988 115 ntBASIC4.76□□□□□ -1.65
PRIM1P49642 RNU2-49P-201ENST00000410666 184 ntBASIC4.76□□□□□ -1.65
PRIM1P49642 AC008011.1-201ENST00000545989 227 ntBASIC4.76□□□□□ -1.65
PRIM1P49642 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
PRIM1P49642 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PRIM1P49642 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PRIM1P49642 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.75□□□□□ -1.65
PRIM1P49642 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PRIM1P49642 AC058791.1-201ENST00000608412 3198 ntBASIC4.75□□□□□ -1.65
PRIM1P49642 Y_RNA.52-201ENST00000362760 96 ntBASIC4.75□□□□□ -1.65
PRIM1P49642 SNORA38.1-201ENST00000364172 131 ntBASIC4.75□□□□□ -1.65
PRIM1P49642 RNU6-975P-201ENST00000384296 105 ntBASIC4.75□□□□□ -1.65
PRIM1P49642 MIR181A2-201ENST00000384863 110 ntBASIC4.75□□□□□ -1.65
PRIM1P49642 SNORD72-201ENST00000390994 80 ntBASIC4.75□□□□□ -1.65
PRIM1P49642 HIST1H2APS3-201ENST00000403259 134 ntBASIC4.75□□□□□ -1.65
PRIM1P49642 MIR1302-5-201ENST00000408164 150 ntBASIC4.75□□□□□ -1.65
PRIM1P49642 AL021397.1-201ENST00000451806 248 ntBASIC4.75□□□□□ -1.65
PRIM1P49642 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC4.75□□□□□ -1.65
PRIM1P49642 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
PRIM1P49642 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
PRIM1P49642 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PRIM1P49642 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
PRIM1P49642 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.75□□□□□ -1.65
PRIM1P49642 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.75□□□□□ -1.65
PRIM1P49642 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC4.74□□□□□ -1.65
PRIM1P49642 RNU4-35P-201ENST00000362588 141 ntBASIC4.74□□□□□ -1.65
PRIM1P49642 RNU6-1107P-201ENST00000364817 104 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms