Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 RNU6-567P-201ENST00000516746 107 ntBASIC2.02□□□□□ -2.09
SLC6A12P48065 IGKV3-31-201ENST00000523109 329 ntBASIC2.02□□□□□ -2.09
SLC6A12P48065 UBL5P4-201ENST00000562584 236 ntBASIC2.02□□□□□ -2.09
SLC6A12P48065 AC006600.1-201ENST00000572529 153 ntBASIC2.02□□□□□ -2.09
SLC6A12P48065 AC090617.3-201ENST00000573670 475 ntBASIC2.02□□□□□ -2.09
SLC6A12P48065 MIR3923-201ENST00000579521 83 ntBASIC2.02□□□□□ -2.09
SLC6A12P48065 AC125232.2-201ENST00000592457 143 ntBASIC2.02□□□□□ -2.09
SLC6A12P48065 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.02□□□□□ -2.09
SLC6A12P48065 AC016727.2-201ENST00000603988 621 ntBASIC2.02□□□□□ -2.09
SLC6A12P48065 U2.1-201ENST00000618978 145 ntBASIC2.02□□□□□ -2.09
SLC6A12P48065 MIR6873-201ENST00000622788 63 ntBASIC2.02□□□□□ -2.09
SLC6A12P48065 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
SLC6A12P48065 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
SLC6A12P48065 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.01□□□□□ -2.09
SLC6A12P48065 Y_RNA.162-201ENST00000363683 102 ntBASIC2.01□□□□□ -2.09
SLC6A12P48065 RNU6-944P-201ENST00000364023 107 ntBASIC2.01□□□□□ -2.09
SLC6A12P48065 SNORD32B-201ENST00000364460 84 ntBASIC2.01□□□□□ -2.09
SLC6A12P48065 RNU6-639P-201ENST00000384074 107 ntBASIC2.01□□□□□ -2.09
SLC6A12P48065 RNU6-611P-201ENST00000384276 104 ntBASIC2.01□□□□□ -2.09
SLC6A12P48065 RNU6-318P-201ENST00000384283 103 ntBASIC2.01□□□□□ -2.09
SLC6A12P48065 MIR518A2-201ENST00000384966 87 ntBASIC2.01□□□□□ -2.09
SLC6A12P48065 MIR17-201ENST00000385012 84 ntBASIC2.01□□□□□ -2.09
SLC6A12P48065 RNU6-159P-201ENST00000391080 106 ntBASIC2.01□□□□□ -2.09
SLC6A12P48065 MIR208B-201ENST00000401172 77 ntBASIC2.01□□□□□ -2.09
SLC6A12P48065 AL023284.1-201ENST00000403956 276 ntBASIC2.01□□□□□ -2.09
SLC6A12P48065 AC004866.1-201ENST00000411748 78 ntBASIC2.01□□□□□ -2.09
SLC6A12P48065 AL590556.1-201ENST00000423231 483 ntBASIC2.01□□□□□ -2.09
SLC6A12P48065 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.01□□□□□ -2.09
SLC6A12P48065 RPL23AP7-203ENST00000449021 469 ntBASIC2.01□□□□□ -2.09
SLC6A12P48065 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.01□□□□□ -2.09
SLC6A12P48065 AL021397.1-201ENST00000451806 248 ntBASIC2.01□□□□□ -2.09
SLC6A12P48065 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.01□□□□□ -2.09
SLC6A12P48065 snoU13.15-201ENST00000459407 104 ntBASIC2.01□□□□□ -2.09
SLC6A12P48065 AC132942.1-201ENST00000486753 483 ntBASIC2.01□□□□□ -2.09
SLC6A12P48065 RPS27P21-201ENST00000486977 252 ntBASIC2.01□□□□□ -2.09
SLC6A12P48065 RNU6-1114P-201ENST00000516022 107 ntBASIC2.01□□□□□ -2.09
SLC6A12P48065 RNU6-911P-201ENST00000516523 104 ntBASIC2.01□□□□□ -2.09
SLC6A12P48065 SNORA40.14-201ENST00000516543 86 ntBASIC2.01□□□□□ -2.09
SLC6A12P48065 AC022616.8-201ENST00000533569 253 ntBASIC2.01□□□□□ -2.09
SLC6A12P48065 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.01□□□□□ -2.09
SLC6A12P48065 VN1R91P-201ENST00000594377 169 ntBASIC2.01□□□□□ -2.09
SLC6A12P48065 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.01□□□□□ -2.09
SLC6A12P48065 AL132822.1-201ENST00000617063 513 ntBASIC2.01□□□□□ -2.09
SLC6A12P48065 AC137590.2-201ENST00000619709 240 ntBASIC2.01□□□□□ -2.09
SLC6A12P48065 AL162373.1-201ENST00000620433 407 ntBASIC2.01□□□□□ -2.09
SLC6A12P48065 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
SLC6A12P48065 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
SLC6A12P48065 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
SLC6A12P48065 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2□□□□□ -2.09
SLC6A12P48065 RNU6-137P-201ENST00000363680 108 ntBASIC2□□□□□ -2.09
SLC6A12P48065 RNA5SP160-201ENST00000364866 120 ntBASIC2□□□□□ -2.09
SLC6A12P48065 Y_RNA.422-201ENST00000384054 114 ntBASIC2□□□□□ -2.09
SLC6A12P48065 Y_RNA.527-201ENST00000384573 102 ntBASIC2□□□□□ -2.09
SLC6A12P48065 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
SLC6A12P48065 RNU6-985P-201ENST00000410182 104 ntBASIC2□□□□□ -2.09
SLC6A12P48065 AL139156.1-201ENST00000412785 841 ntBASIC2□□□□□ -2.09
SLC6A12P48065 AL356379.1-201ENST00000414105 126 ntBASIC2□□□□□ -2.09
SLC6A12P48065 USP9YP16-201ENST00000430287 407 ntBASIC2□□□□□ -2.09
SLC6A12P48065 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2□□□□□ -2.09
SLC6A12P48065 AC010095.1-201ENST00000443543 144 ntBASIC2□□□□□ -2.09
SLC6A12P48065 AC096638.1-201ENST00000444678 216 ntBASIC2□□□□□ -2.09
SLC6A12P48065 USP9YP23-201ENST00000455085 407 ntBASIC2□□□□□ -2.09
SLC6A12P48065 RNU6-717P-201ENST00000459076 104 ntBASIC2□□□□□ -2.09
SLC6A12P48065 UBL5P3-201ENST00000475112 231 ntBASIC2□□□□□ -2.09
SLC6A12P48065 AC090255.1-201ENST00000495779 349 ntBASIC2□□□□□ -2.09
SLC6A12P48065 RNU6-1046P-201ENST00000516538 107 ntBASIC2□□□□□ -2.09
SLC6A12P48065 AC144568.1-201ENST00000520139 137 ntBASIC2□□□□□ -2.09
SLC6A12P48065 AC018630.3-201ENST00000542637 96 ntBASIC2□□□□□ -2.09
SLC6A12P48065 EIF4A1P12-201ENST00000551910 141 ntBASIC2□□□□□ -2.09
SLC6A12P48065 AC006504.6-201ENST00000590142 199 ntBASIC2□□□□□ -2.09
SLC6A12P48065 7SK.7-201ENST00000603504 247 ntBASIC2□□□□□ -2.09
SLC6A12P48065 AC005034.5-201ENST00000604219 466 ntBASIC2□□□□□ -2.09
SLC6A12P48065 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2□□□□□ -2.09
SLC6A12P48065 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2□□□□□ -2.09
SLC6A12P48065 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
SLC6A12P48065 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2□□□□□ -2.09
SLC6A12P48065 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.99□□□□□ -2.09
SLC6A12P48065 AC131280.1-202ENST00000624067 4211 ntBASIC1.99□□□□□ -2.09
SLC6A12P48065 RNA5SP361-201ENST00000362686 118 ntBASIC1.99□□□□□ -2.09
SLC6A12P48065 RNU6-1301P-201ENST00000362724 104 ntBASIC1.99□□□□□ -2.09
SLC6A12P48065 Y_RNA.153-201ENST00000363615 91 ntBASIC1.99□□□□□ -2.09
SLC6A12P48065 RNU6-450P-201ENST00000364654 107 ntBASIC1.99□□□□□ -2.09
SLC6A12P48065 AC117470.1-201ENST00000381974 330 ntBASIC1.99□□□□□ -2.09
SLC6A12P48065 RNU6-281P-201ENST00000384212 103 ntBASIC1.99□□□□□ -2.09
SLC6A12P48065 RNU6-823P-201ENST00000391042 103 ntBASIC1.99□□□□□ -2.09
SLC6A12P48065 RNU6-1093P-201ENST00000391194 107 ntBASIC1.99□□□□□ -2.09
SLC6A12P48065 U3.40-201ENST00000408706 208 ntBASIC1.99□□□□□ -2.09
SLC6A12P48065 Y_RNA.605-201ENST00000410577 105 ntBASIC1.99□□□□□ -2.09
SLC6A12P48065 HMGB3P2-201ENST00000411913 584 ntBASIC1.99□□□□□ -2.09
SLC6A12P48065 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.99□□□□□ -2.09
SLC6A12P48065 RNU7-87P-201ENST00000459343 62 ntBASIC1.99□□□□□ -2.09
SLC6A12P48065 snoU13.26-201ENST00000459452 105 ntBASIC1.99□□□□□ -2.09
SLC6A12P48065 HMGN1P10-201ENST00000474557 553 ntBASIC1.99□□□□□ -2.09
SLC6A12P48065 AC010469.2-201ENST00000496412 480 ntBASIC1.99□□□□□ -2.09
SLC6A12P48065 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.99□□□□□ -2.09
SLC6A12P48065 RNU6-327P-201ENST00000516270 127 ntBASIC1.99□□□□□ -2.09
SLC6A12P48065 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.99□□□□□ -2.09
SLC6A12P48065 AC113195.1-201ENST00000579952 141 ntBASIC1.99□□□□□ -2.09
SLC6A12P48065 BX322639.1-202ENST00000423987 2213 ntBASIC1.99□□□□□ -2.09
SLC6A12P48065 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 1959.2 ms