Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AC025253.1-201ENST00000613623 543 ntBASIC1.73□□□□□ -2.13
BRCC3P46736 MIR5701-2-201ENST00000615634 82 ntBASIC1.73□□□□□ -2.13
BRCC3P46736 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
BRCC3P46736 ZNF299P-201ENST00000406845 1804 ntBASIC1.73□□□□□ -2.13
BRCC3P46736 MIR378A-201ENST00000362177 66 ntBASIC1.72□□□□□ -2.13
BRCC3P46736 RNU6-545P-201ENST00000362681 104 ntBASIC1.72□□□□□ -2.13
BRCC3P46736 Y_RNA.58-201ENST00000362807 102 ntBASIC1.72□□□□□ -2.13
BRCC3P46736 RNU1-76P-201ENST00000362903 159 ntBASIC1.72□□□□□ -2.13
BRCC3P46736 Y_RNA.154-201ENST00000363624 102 ntBASIC1.72□□□□□ -2.13
BRCC3P46736 Y_RNA.263-201ENST00000364659 114 ntBASIC1.72□□□□□ -2.13
BRCC3P46736 RNU4-9P-201ENST00000364951 139 ntBASIC1.72□□□□□ -2.13
BRCC3P46736 RNY3P1-201ENST00000365085 102 ntBASIC1.72□□□□□ -2.13
BRCC3P46736 Y_RNA.332-201ENST00000365271 113 ntBASIC1.72□□□□□ -2.13
BRCC3P46736 RNY3-201ENST00000365484 102 ntBASIC1.72□□□□□ -2.13
BRCC3P46736 Y_RNA.490-201ENST00000384413 102 ntBASIC1.72□□□□□ -2.13
BRCC3P46736 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
BRCC3P46736 SNORA67.5-201ENST00000391036 107 ntBASIC1.72□□□□□ -2.13
BRCC3P46736 AL357139.1-201ENST00000407792 426 ntBASIC1.72□□□□□ -2.13
BRCC3P46736 RN7SKP101-201ENST00000411376 320 ntBASIC1.72□□□□□ -2.13
BRCC3P46736 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
BRCC3P46736 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.72□□□□□ -2.13
BRCC3P46736 Y_RNA.635-201ENST00000459041 101 ntBASIC1.72□□□□□ -2.13
BRCC3P46736 AC007215.1-201ENST00000464893 276 ntBASIC1.72□□□□□ -2.13
BRCC3P46736 FGF7P4-201ENST00000509595 295 ntBASIC1.72□□□□□ -2.13
BRCC3P46736 RNU6-559P-201ENST00000516151 98 ntBASIC1.72□□□□□ -2.13
BRCC3P46736 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.72□□□□□ -2.13
BRCC3P46736 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.72□□□□□ -2.13
BRCC3P46736 AC027288.2-201ENST00000553028 243 ntBASIC1.72□□□□□ -2.13
BRCC3P46736 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.72□□□□□ -2.13
BRCC3P46736 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
BRCC3P46736 LARP7P1-201ENST00000605576 316 ntBASIC1.72□□□□□ -2.13
BRCC3P46736 AL355802.3-201ENST00000607571 545 ntBASIC1.72□□□□□ -2.13
BRCC3P46736 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.72□□□□□ -2.13
BRCC3P46736 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.72□□□□□ -2.13
BRCC3P46736 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.72□□□□□ -2.13
BRCC3P46736 ZNF204P-201ENST00000416749 2397 ntBASIC1.71□□□□□ -2.14
BRCC3P46736 RNU1-42P-201ENST00000364033 160 ntBASIC1.71□□□□□ -2.14
BRCC3P46736 RNU6-17P-201ENST00000384245 107 ntBASIC1.71□□□□□ -2.14
BRCC3P46736 RNU6-18P-201ENST00000384527 107 ntBASIC1.71□□□□□ -2.14
BRCC3P46736 RNU6-1009P-201ENST00000390996 107 ntBASIC1.71□□□□□ -2.14
BRCC3P46736 RPL23AP36-201ENST00000413895 458 ntBASIC1.71□□□□□ -2.14
BRCC3P46736 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.71□□□□□ -2.14
BRCC3P46736 AC004386.2-201ENST00000441858 148 ntBASIC1.71□□□□□ -2.14
BRCC3P46736 SNRPEP8-201ENST00000442866 260 ntBASIC1.71□□□□□ -2.14
BRCC3P46736 U8.22-201ENST00000459141 133 ntBASIC1.71□□□□□ -2.14
BRCC3P46736 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.71□□□□□ -2.14
BRCC3P46736 RNU6-58P-201ENST00000517143 103 ntBASIC1.71□□□□□ -2.14
BRCC3P46736 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.71□□□□□ -2.14
BRCC3P46736 RAB11AP2-201ENST00000545905 639 ntBASIC1.71□□□□□ -2.14
BRCC3P46736 AL773524.1-201ENST00000614065 229 ntBASIC1.71□□□□□ -2.14
BRCC3P46736 Y_RNA.804-201ENST00000615262 101 ntBASIC1.71□□□□□ -2.14
BRCC3P46736 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.71□□□□□ -2.14
BRCC3P46736 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.71□□□□□ -2.14
BRCC3P46736 MIR1302-1-201ENST00000637932 143 ntBASIC1.71□□□□□ -2.14
BRCC3P46736 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
BRCC3P46736 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
BRCC3P46736 RNU6-222P-201ENST00000362438 107 ntBASIC1.7□□□□□ -2.14
BRCC3P46736 Y_RNA.67-201ENST00000362870 100 ntBASIC1.7□□□□□ -2.14
BRCC3P46736 RNY1P16-201ENST00000363063 111 ntBASIC1.7□□□□□ -2.14
BRCC3P46736 SNORD115-32-201ENST00000364079 82 ntBASIC1.7□□□□□ -2.14
BRCC3P46736 SNORA8-201ENST00000384574 139 ntBASIC1.7□□□□□ -2.14
BRCC3P46736 RNA5SP212-201ENST00000391223 107 ntBASIC1.7□□□□□ -2.14
BRCC3P46736 AL033519.2-201ENST00000403958 392 ntBASIC1.7□□□□□ -2.14
BRCC3P46736 MIR1323-201ENST00000408090 73 ntBASIC1.7□□□□□ -2.14
BRCC3P46736 AP1B1P2-201ENST00000416196 106 ntBASIC1.7□□□□□ -2.14
BRCC3P46736 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.7□□□□□ -2.14
BRCC3P46736 BX510359.4-201ENST00000423750 193 ntBASIC1.7□□□□□ -2.14
BRCC3P46736 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.7□□□□□ -2.14
BRCC3P46736 RNU1-131P-201ENST00000458943 161 ntBASIC1.7□□□□□ -2.14
BRCC3P46736 Y_RNA.632-201ENST00000459189 102 ntBASIC1.7□□□□□ -2.14
BRCC3P46736 RNU7-14P-201ENST00000459331 62 ntBASIC1.7□□□□□ -2.14
BRCC3P46736 AC097473.1-201ENST00000508142 408 ntBASIC1.7□□□□□ -2.14
BRCC3P46736 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.7□□□□□ -2.14
BRCC3P46736 Y_RNA.718-201ENST00000517110 102 ntBASIC1.7□□□□□ -2.14
BRCC3P46736 RNA5SP490-201ENST00000517141 136 ntBASIC1.7□□□□□ -2.14
BRCC3P46736 AL590705.4-201ENST00000532209 134 ntBASIC1.7□□□□□ -2.14
BRCC3P46736 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.7□□□□□ -2.14
BRCC3P46736 MIR4498-201ENST00000577599 66 ntBASIC1.7□□□□□ -2.14
BRCC3P46736 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.7□□□□□ -2.14
BRCC3P46736 AC084781.2-201ENST00000615568 161 ntBASIC1.7□□□□□ -2.14
BRCC3P46736 U1.36-201ENST00000620684 176 ntBASIC1.7□□□□□ -2.14
BRCC3P46736 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.7□□□□□ -2.14
BRCC3P46736 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
BRCC3P46736 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
BRCC3P46736 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
BRCC3P46736 RNU6-60P-201ENST00000364792 103 ntBASIC1.69□□□□□ -2.14
BRCC3P46736 Y_RNA.387-201ENST00000383918 102 ntBASIC1.69□□□□□ -2.14
BRCC3P46736 RNU6-890P-201ENST00000384121 107 ntBASIC1.69□□□□□ -2.14
BRCC3P46736 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
BRCC3P46736 RNA5SP504-201ENST00000410676 117 ntBASIC1.69□□□□□ -2.14
BRCC3P46736 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.69□□□□□ -2.14
BRCC3P46736 USMG5P1-201ENST00000425964 177 ntBASIC1.69□□□□□ -2.14
BRCC3P46736 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.69□□□□□ -2.14
BRCC3P46736 MTND3P23-201ENST00000431980 347 ntBASIC1.69□□□□□ -2.14
BRCC3P46736 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.69□□□□□ -2.14
BRCC3P46736 AC093019.1-201ENST00000443135 252 ntBASIC1.69□□□□□ -2.14
BRCC3P46736 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.69□□□□□ -2.14
BRCC3P46736 AP000870.1-201ENST00000472927 406 ntBASIC1.69□□□□□ -2.14
BRCC3P46736 RNU5F-4P-201ENST00000516581 114 ntBASIC1.69□□□□□ -2.14
BRCC3P46736 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 137.1 ms