Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 RNU6-1026P-201ENST00000384465 108 ntBASIC1.91□□□□□ -2.1
NKX2-1P43699 RNU6-1160P-201ENST00000384546 104 ntBASIC1.91□□□□□ -2.1
NKX2-1P43699 RNU6-160P-201ENST00000384591 107 ntBASIC1.91□□□□□ -2.1
NKX2-1P43699 SDAD1P3-201ENST00000427380 333 ntBASIC1.91□□□□□ -2.1
NKX2-1P43699 MTND2P29-201ENST00000438595 412 ntBASIC1.91□□□□□ -2.1
NKX2-1P43699 AC073910.1-201ENST00000445047 438 ntBASIC1.91□□□□□ -2.1
NKX2-1P43699 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.91□□□□□ -2.1
NKX2-1P43699 PCNPP5-201ENST00000452246 481 ntBASIC1.91□□□□□ -2.1
NKX2-1P43699 AC055731.1-201ENST00000474387 401 ntBASIC1.91□□□□□ -2.1
NKX2-1P43699 AC104435.1-201ENST00000483483 166 ntBASIC1.91□□□□□ -2.1
NKX2-1P43699 RNU6-991P-201ENST00000516168 107 ntBASIC1.91□□□□□ -2.1
NKX2-1P43699 RNU2-34P-201ENST00000516534 121 ntBASIC1.91□□□□□ -2.1
NKX2-1P43699 Y_RNA.713-201ENST00000517013 96 ntBASIC1.91□□□□□ -2.1
NKX2-1P43699 AC093023.1-201ENST00000547375 507 ntBASIC1.91□□□□□ -2.1
NKX2-1P43699 UBL5P4-201ENST00000562584 236 ntBASIC1.91□□□□□ -2.1
NKX2-1P43699 AC006600.1-201ENST00000572529 153 ntBASIC1.91□□□□□ -2.1
NKX2-1P43699 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.91□□□□□ -2.1
NKX2-1P43699 AC006023.1-201ENST00000603944 259 ntBASIC1.91□□□□□ -2.1
NKX2-1P43699 AL353621.2-201ENST00000605340 133 ntBASIC1.91□□□□□ -2.1
NKX2-1P43699 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
NKX2-1P43699 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.11
NKX2-1P43699 RNU1-58P-201ENST00000362413 163 ntBASIC1.9□□□□□ -2.11
NKX2-1P43699 RNU4-50P-201ENST00000364361 141 ntBASIC1.9□□□□□ -2.11
NKX2-1P43699 RNU6-1164P-201ENST00000364428 107 ntBASIC1.9□□□□□ -2.11
NKX2-1P43699 SNORA63C-201ENST00000364578 129 ntBASIC1.9□□□□□ -2.11
NKX2-1P43699 RNA5SP37-201ENST00000365420 130 ntBASIC1.9□□□□□ -2.11
NKX2-1P43699 RNU6-738P-201ENST00000384531 106 ntBASIC1.9□□□□□ -2.11
NKX2-1P43699 RNU6-823P-201ENST00000391042 103 ntBASIC1.9□□□□□ -2.11
NKX2-1P43699 MIR1252-201ENST00000408861 65 ntBASIC1.9□□□□□ -2.11
NKX2-1P43699 Y_RNA.595-201ENST00000410403 105 ntBASIC1.9□□□□□ -2.11
NKX2-1P43699 RNA5SP504-201ENST00000410676 117 ntBASIC1.9□□□□□ -2.11
NKX2-1P43699 RNU2-52P-201ENST00000410680 190 ntBASIC1.9□□□□□ -2.11
NKX2-1P43699 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.9□□□□□ -2.11
NKX2-1P43699 RNU7-87P-201ENST00000459343 62 ntBASIC1.9□□□□□ -2.11
NKX2-1P43699 AC091179.3-201ENST00000474761 144 ntBASIC1.9□□□□□ -2.11
NKX2-1P43699 ATP5EP1-201ENST00000510257 156 ntBASIC1.9□□□□□ -2.11
NKX2-1P43699 AC067942.3-201ENST00000512025 362 ntBASIC1.9□□□□□ -2.11
NKX2-1P43699 ANP32BP3-201ENST00000559213 706 ntBASIC1.9□□□□□ -2.11
NKX2-1P43699 MIR5006-201ENST00000583027 110 ntBASIC1.9□□□□□ -2.11
NKX2-1P43699 AC006504.6-201ENST00000590142 199 ntBASIC1.9□□□□□ -2.11
NKX2-1P43699 AC016925.2-201ENST00000605108 242 ntBASIC1.9□□□□□ -2.11
NKX2-1P43699 AL021879.1-201ENST00000611756 288 ntBASIC1.9□□□□□ -2.11
NKX2-1P43699 MTND5P35-201ENST00000557537 1720 ntBASIC1.9□□□□□ -2.11
NKX2-1P43699 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
NKX2-1P43699 AC091812.1-201ENST00000432235 1948 ntBASIC1.89□□□□□ -2.11
NKX2-1P43699 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
NKX2-1P43699 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
NKX2-1P43699 LINC02555-201ENST00000563933 1951 ntBASIC1.89□□□□□ -2.11
NKX2-1P43699 Y_RNA.216-201ENST00000364205 93 ntBASIC1.89□□□□□ -2.11
NKX2-1P43699 RNU6-308P-201ENST00000390957 107 ntBASIC1.89□□□□□ -2.11
NKX2-1P43699 AL355497.1-201ENST00000406262 551 ntBASIC1.89□□□□□ -2.11
NKX2-1P43699 RNA5SP184-201ENST00000411071 108 ntBASIC1.89□□□□□ -2.11
NKX2-1P43699 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.89□□□□□ -2.11
NKX2-1P43699 MTCO1P44-201ENST00000441935 243 ntBASIC1.89□□□□□ -2.11
NKX2-1P43699 RPL26P26-201ENST00000480251 434 ntBASIC1.89□□□□□ -2.11
NKX2-1P43699 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC1.89□□□□□ -2.11
NKX2-1P43699 AC022868.1-201ENST00000517767 391 ntBASIC1.89□□□□□ -2.11
NKX2-1P43699 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.89□□□□□ -2.11
NKX2-1P43699 AC040926.1-201ENST00000530195 238 ntBASIC1.89□□□□□ -2.11
NKX2-1P43699 RRN3P3-201ENST00000549207 578 ntBASIC1.89□□□□□ -2.11
NKX2-1P43699 MIR5695-201ENST00000579717 85 ntBASIC1.89□□□□□ -2.11
NKX2-1P43699 MIR3684-201ENST00000579779 74 ntBASIC1.89□□□□□ -2.11
NKX2-1P43699 MIR4680-201ENST00000580906 66 ntBASIC1.89□□□□□ -2.11
NKX2-1P43699 AC007229.1-201ENST00000590455 412 ntBASIC1.89□□□□□ -2.11
NKX2-1P43699 MIR1291-201ENST00000627649 87 ntBASIC1.89□□□□□ -2.11
NKX2-1P43699 AC099654.10-201ENST00000640395 161 ntBASIC1.89□□□□□ -2.11
NKX2-1P43699 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
NKX2-1P43699 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.89□□□□□ -2.11
NKX2-1P43699 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
NKX2-1P43699 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
NKX2-1P43699 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
NKX2-1P43699 Y_RNA.132-201ENST00000363421 102 ntBASIC1.88□□□□□ -2.11
NKX2-1P43699 Y_RNA.145-201ENST00000363527 102 ntBASIC1.88□□□□□ -2.11
NKX2-1P43699 SNORA80A-201ENST00000363922 136 ntBASIC1.88□□□□□ -2.11
NKX2-1P43699 Y_RNA.455-201ENST00000384230 98 ntBASIC1.88□□□□□ -2.11
NKX2-1P43699 Y_RNA.458-201ENST00000384240 102 ntBASIC1.88□□□□□ -2.11
NKX2-1P43699 Y_RNA.462-201ENST00000384268 102 ntBASIC1.88□□□□□ -2.11
NKX2-1P43699 MIR196B-201ENST00000384852 84 ntBASIC1.88□□□□□ -2.11
NKX2-1P43699 SNORD78.2-201ENST00000391076 69 ntBASIC1.88□□□□□ -2.11
NKX2-1P43699 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
NKX2-1P43699 AL359511.1-201ENST00000402970 211 ntBASIC1.88□□□□□ -2.11
NKX2-1P43699 MIR1283-1-201ENST00000408494 87 ntBASIC1.88□□□□□ -2.11
NKX2-1P43699 ELOCP21-201ENST00000412558 336 ntBASIC1.88□□□□□ -2.11
NKX2-1P43699 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.88□□□□□ -2.11
NKX2-1P43699 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.88□□□□□ -2.11
NKX2-1P43699 AL357134.1-201ENST00000445848 426 ntBASIC1.88□□□□□ -2.11
NKX2-1P43699 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.88□□□□□ -2.11
NKX2-1P43699 AC114982.1-201ENST00000469402 321 ntBASIC1.88□□□□□ -2.11
NKX2-1P43699 AC090255.1-201ENST00000495779 349 ntBASIC1.88□□□□□ -2.11
NKX2-1P43699 AC026436.1-201ENST00000510537 270 ntBASIC1.88□□□□□ -2.11
NKX2-1P43699 RNA5SP356-201ENST00000515972 94 ntBASIC1.88□□□□□ -2.11
NKX2-1P43699 RNA5SP320-201ENST00000516263 124 ntBASIC1.88□□□□□ -2.11
NKX2-1P43699 SCARNA15.1-201ENST00000516384 125 ntBASIC1.88□□□□□ -2.11
NKX2-1P43699 RNU4ATAC17P-201ENST00000517272 120 ntBASIC1.88□□□□□ -2.11
NKX2-1P43699 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.88□□□□□ -2.11
NKX2-1P43699 MIR4319-201ENST00000577285 85 ntBASIC1.88□□□□□ -2.11
NKX2-1P43699 RPS29P30-201ENST00000600975 111 ntBASIC1.88□□□□□ -2.11
NKX2-1P43699 AL355297.3-201ENST00000604082 446 ntBASIC1.88□□□□□ -2.11
NKX2-1P43699 MZT1P2-201ENST00000604387 248 ntBASIC1.88□□□□□ -2.11
NKX2-1P43699 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 165.6 ms