Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.33□□□□□ -1.88
CCNFP41002 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.33□□□□□ -1.88
CCNFP41002 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
CCNFP41002 AC092435.3-201ENST00000565538 3654 ntBASIC3.33□□□□□ -1.88
CCNFP41002 Y_RNA.7-201ENST00000362352 102 ntBASIC3.33□□□□□ -1.88
CCNFP41002 RNU4-35P-201ENST00000362588 141 ntBASIC3.33□□□□□ -1.88
CCNFP41002 RNA5SP50-201ENST00000363731 107 ntBASIC3.33□□□□□ -1.88
CCNFP41002 DYNLT3P1-201ENST00000378574 347 ntBASIC3.33□□□□□ -1.88
CCNFP41002 SNORD17-201ENST00000390930 237 ntBASIC3.33□□□□□ -1.88
CCNFP41002 AL357075.1-201ENST00000404107 726 ntBASIC3.33□□□□□ -1.88
CCNFP41002 RNA5SP229-201ENST00000410809 99 ntBASIC3.33□□□□□ -1.88
CCNFP41002 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.33□□□□□ -1.88
CCNFP41002 RPL30P4-201ENST00000429309 333 ntBASIC3.33□□□□□ -1.88
CCNFP41002 RPS12P18-201ENST00000442381 270 ntBASIC3.33□□□□□ -1.88
CCNFP41002 RNU7-57P-201ENST00000459540 60 ntBASIC3.33□□□□□ -1.88
CCNFP41002 AC025518.1-201ENST00000479856 347 ntBASIC3.33□□□□□ -1.88
CCNFP41002 SCARNA13-201ENST00000516672 275 ntBASIC3.33□□□□□ -1.88
CCNFP41002 RNU6-586P-201ENST00000517265 104 ntBASIC3.33□□□□□ -1.88
CCNFP41002 MTND5P41-201ENST00000517498 206 ntBASIC3.33□□□□□ -1.88
CCNFP41002 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.33□□□□□ -1.88
CCNFP41002 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
CCNFP41002 MIR3144-201ENST00000579460 79 ntBASIC3.33□□□□□ -1.88
CCNFP41002 MIR3910-1-201ENST00000580936 111 ntBASIC3.33□□□□□ -1.88
CCNFP41002 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.33□□□□□ -1.88
CCNFP41002 AC012314.7-201ENST00000619693 93 ntBASIC3.33□□□□□ -1.88
CCNFP41002 AC000403.1-201ENST00000613696 3585 ntBASIC3.32□□□□□ -1.88
CCNFP41002 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.32□□□□□ -1.88
CCNFP41002 RNU1-70P-201ENST00000362618 164 ntBASIC3.32□□□□□ -1.88
CCNFP41002 Y_RNA.182-201ENST00000363880 111 ntBASIC3.32□□□□□ -1.88
CCNFP41002 RNU4-10P-201ENST00000364383 140 ntBASIC3.32□□□□□ -1.88
CCNFP41002 Y_RNA.238-201ENST00000364441 102 ntBASIC3.32□□□□□ -1.88
CCNFP41002 Y_RNA.435-201ENST00000384095 112 ntBASIC3.32□□□□□ -1.88
CCNFP41002 SNORA9-201ENST00000384215 133 ntBASIC3.32□□□□□ -1.88
CCNFP41002 MIR34B-201ENST00000385076 84 ntBASIC3.32□□□□□ -1.88
CCNFP41002 SNORA11.2-201ENST00000408318 127 ntBASIC3.32□□□□□ -1.88
CCNFP41002 MIR1283-1-201ENST00000408494 87 ntBASIC3.32□□□□□ -1.88
CCNFP41002 RPL23AP58-201ENST00000440453 469 ntBASIC3.32□□□□□ -1.88
CCNFP41002 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.32□□□□□ -1.88
CCNFP41002 AC083906.5-201ENST00000503722 328 ntBASIC3.32□□□□□ -1.88
CCNFP41002 RNU6-965P-201ENST00000516721 96 ntBASIC3.32□□□□□ -1.88
CCNFP41002 AC245166.1-201ENST00000521012 253 ntBASIC3.32□□□□□ -1.88
CCNFP41002 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.32□□□□□ -1.88
CCNFP41002 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.32□□□□□ -1.88
CCNFP41002 AC007179.3-201ENST00000604976 235 ntBASIC3.32□□□□□ -1.88
CCNFP41002 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.32□□□□□ -1.88
CCNFP41002 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CCNFP41002 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
CCNFP41002 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
CCNFP41002 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.32□□□□□ -1.88
CCNFP41002 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CCNFP41002 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
CCNFP41002 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCNFP41002 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCNFP41002 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CCNFP41002 RNA5SP72-201ENST00000364442 117 ntBASIC3.31□□□□□ -1.88
CCNFP41002 Y_RNA.398-201ENST00000383952 99 ntBASIC3.31□□□□□ -1.88
CCNFP41002 SNORA48.8-201ENST00000391324 134 ntBASIC3.31□□□□□ -1.88
CCNFP41002 MIR1185-2-201ENST00000408687 86 ntBASIC3.31□□□□□ -1.88
CCNFP41002 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.31□□□□□ -1.88
CCNFP41002 AC074290.1-201ENST00000448883 135 ntBASIC3.31□□□□□ -1.88
CCNFP41002 AC090515.1-201ENST00000465295 476 ntBASIC3.31□□□□□ -1.88
CCNFP41002 RNA5SP217-201ENST00000515959 91 ntBASIC3.31□□□□□ -1.88
CCNFP41002 SNORA70.12-201ENST00000516084 153 ntBASIC3.31□□□□□ -1.88
CCNFP41002 AC027419.1-201ENST00000522976 328 ntBASIC3.31□□□□□ -1.88
CCNFP41002 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC3.31□□□□□ -1.88
CCNFP41002 MIR3922-201ENST00000585192 84 ntBASIC3.31□□□□□ -1.88
CCNFP41002 AC069294.1-201ENST00000608397 350 ntBASIC3.31□□□□□ -1.88
CCNFP41002 AC013791.1-201ENST00000616619 62 ntBASIC3.31□□□□□ -1.88
CCNFP41002 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.31□□□□□ -1.88
CCNFP41002 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCNFP41002 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.3□□□□□ -1.88
CCNFP41002 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCNFP41002 RNU6-234P-201ENST00000365229 104 ntBASIC3.3□□□□□ -1.88
CCNFP41002 AL139095.1-201ENST00000404326 391 ntBASIC3.3□□□□□ -1.88
CCNFP41002 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.3□□□□□ -1.88
CCNFP41002 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.3□□□□□ -1.88
CCNFP41002 CST9LP2-201ENST00000437612 320 ntBASIC3.3□□□□□ -1.88
CCNFP41002 AC115115.1-201ENST00000449927 248 ntBASIC3.3□□□□□ -1.88
CCNFP41002 CYCSP35-201ENST00000451978 304 ntBASIC3.3□□□□□ -1.88
CCNFP41002 AC080013.2-201ENST00000460866 323 ntBASIC3.3□□□□□ -1.88
CCNFP41002 RN7SL293P-201ENST00000481765 281 ntBASIC3.3□□□□□ -1.88
CCNFP41002 AC006483.1-201ENST00000487308 313 ntBASIC3.3□□□□□ -1.88
CCNFP41002 CKS1BP2-201ENST00000497342 240 ntBASIC3.3□□□□□ -1.88
CCNFP41002 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.3□□□□□ -1.88
CCNFP41002 IGKV2-26-201ENST00000518305 343 ntBASIC3.3□□□□□ -1.88
CCNFP41002 SUMO2P18-201ENST00000518873 252 ntBASIC3.3□□□□□ -1.88
CCNFP41002 AC105245.1-201ENST00000581934 244 ntBASIC3.3□□□□□ -1.88
CCNFP41002 AL713866.2-201ENST00000603579 219 ntBASIC3.3□□□□□ -1.88
CCNFP41002 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.3□□□□□ -1.88
CCNFP41002 AC091953.5-201ENST00000622919 233 ntBASIC3.3□□□□□ -1.88
CCNFP41002 AC073346.2-201ENST00000624724 2058 ntBASIC3.3□□□□□ -1.88
CCNFP41002 AC080128.1-201ENST00000474389 1917 ntBASIC3.3□□□□□ -1.88
CCNFP41002 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
CCNFP41002 AC008264.2-201ENST00000610193 3731 ntBASIC3.3□□□□□ -1.88
CCNFP41002 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CCNFP41002 SNORA72.4-201ENST00000384174 132 ntBASIC3.29□□□□□ -1.88
CCNFP41002 MIR300-201ENST00000401138 83 ntBASIC3.29□□□□□ -1.88
CCNFP41002 RNU6-394P-201ENST00000410735 107 ntBASIC3.29□□□□□ -1.88
CCNFP41002 RNU6-1135P-201ENST00000411083 103 ntBASIC3.29□□□□□ -1.88
CCNFP41002 RNU6-57P-201ENST00000411348 103 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 132.9 ms