Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 AC080013.6-201ENST00000606185 215 ntBASIC1.41□□□□□ -2.18
RFC4P35249 DISC2.1-201ENST00000612827 205 ntBASIC1.41□□□□□ -2.18
RFC4P35249 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
RFC4P35249 RNU6-862P-201ENST00000362804 105 ntBASIC1.4□□□□□ -2.19
RFC4P35249 Y_RNA.151-201ENST00000363566 112 ntBASIC1.4□□□□□ -2.19
RFC4P35249 RNU6-112P-201ENST00000363599 104 ntBASIC1.4□□□□□ -2.19
RFC4P35249 SNORD113-7-201ENST00000363762 77 ntBASIC1.4□□□□□ -2.19
RFC4P35249 RNU6-933P-201ENST00000384424 107 ntBASIC1.4□□□□□ -2.19
RFC4P35249 RNU6-332P-201ENST00000391193 108 ntBASIC1.4□□□□□ -2.19
RFC4P35249 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
RFC4P35249 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.4□□□□□ -2.19
RFC4P35249 AC099677.2-201ENST00000436385 175 ntBASIC1.4□□□□□ -2.19
RFC4P35249 MTCO2P7-201ENST00000446518 666 ntBASIC1.4□□□□□ -2.19
RFC4P35249 AC007395.1-201ENST00000451333 677 ntBASIC1.4□□□□□ -2.19
RFC4P35249 AC099513.1-201ENST00000490423 301 ntBASIC1.4□□□□□ -2.19
RFC4P35249 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.4□□□□□ -2.19
RFC4P35249 RNU6-1041P-201ENST00000516254 102 ntBASIC1.4□□□□□ -2.19
RFC4P35249 SUMO2P18-201ENST00000518873 252 ntBASIC1.4□□□□□ -2.19
RFC4P35249 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.4□□□□□ -2.19
RFC4P35249 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
RFC4P35249 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.4□□□□□ -2.19
RFC4P35249 FGF7P1-201ENST00000582820 288 ntBASIC1.4□□□□□ -2.19
RFC4P35249 MIR5006-201ENST00000583027 110 ntBASIC1.4□□□□□ -2.19
RFC4P35249 AP000907.4-201ENST00000604143 237 ntBASIC1.4□□□□□ -2.19
RFC4P35249 MIR8076-201ENST00000611401 83 ntBASIC1.4□□□□□ -2.19
RFC4P35249 AC005562.2-201ENST00000618264 111 ntBASIC1.4□□□□□ -2.19
RFC4P35249 MIR8063-201ENST00000621930 81 ntBASIC1.4□□□□□ -2.19
RFC4P35249 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.4□□□□□ -2.19
RFC4P35249 MTND5P9-201ENST00000503854 1755 ntBASIC1.39□□□□□ -2.19
RFC4P35249 RNU6-562P-201ENST00000362731 107 ntBASIC1.39□□□□□ -2.19
RFC4P35249 RNU6-271P-201ENST00000363858 105 ntBASIC1.39□□□□□ -2.19
RFC4P35249 SNORD26-201ENST00000384147 75 ntBASIC1.39□□□□□ -2.19
RFC4P35249 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
RFC4P35249 AL590632.1-201ENST00000424289 371 ntBASIC1.39□□□□□ -2.19
RFC4P35249 C8orf59P1-201ENST00000429930 303 ntBASIC1.39□□□□□ -2.19
RFC4P35249 FTH1P12-201ENST00000432137 551 ntBASIC1.39□□□□□ -2.19
RFC4P35249 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.39□□□□□ -2.19
RFC4P35249 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.39□□□□□ -2.19
RFC4P35249 MTCO3P8-201ENST00000453691 755 ntBASIC1.39□□□□□ -2.19
RFC4P35249 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.39□□□□□ -2.19
RFC4P35249 AC090821.2-201ENST00000523552 176 ntBASIC1.39□□□□□ -2.19
RFC4P35249 AC016256.1-201ENST00000547971 354 ntBASIC1.39□□□□□ -2.19
RFC4P35249 RRN3P3-201ENST00000549207 578 ntBASIC1.39□□□□□ -2.19
RFC4P35249 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.39□□□□□ -2.19
RFC4P35249 RPL17P51-201ENST00000605218 238 ntBASIC1.39□□□□□ -2.19
RFC4P35249 AL355802.3-201ENST00000607571 545 ntBASIC1.39□□□□□ -2.19
RFC4P35249 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
RFC4P35249 AC068205.3-201ENST00000636385 468 ntBASIC1.39□□□□□ -2.19
RFC4P35249 AC099654.12-201ENST00000639868 649 ntBASIC1.39□□□□□ -2.19
RFC4P35249 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
RFC4P35249 SNORD33-201ENST00000362761 85 ntBASIC1.38□□□□□ -2.19
RFC4P35249 RNU6-451P-201ENST00000362921 107 ntBASIC1.38□□□□□ -2.19
RFC4P35249 Y_RNA.256-201ENST00000364594 104 ntBASIC1.38□□□□□ -2.19
RFC4P35249 RNU6-790P-201ENST00000384479 105 ntBASIC1.38□□□□□ -2.19
RFC4P35249 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.38□□□□□ -2.19
RFC4P35249 AC004866.1-201ENST00000411748 78 ntBASIC1.38□□□□□ -2.19
RFC4P35249 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.38□□□□□ -2.19
RFC4P35249 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.38□□□□□ -2.19
RFC4P35249 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.38□□□□□ -2.19
RFC4P35249 MTCO1P20-201ENST00000425366 358 ntBASIC1.38□□□□□ -2.19
RFC4P35249 AL589823.1-201ENST00000429577 183 ntBASIC1.38□□□□□ -2.19
RFC4P35249 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.38□□□□□ -2.19
RFC4P35249 AC016717.1-201ENST00000448918 286 ntBASIC1.38□□□□□ -2.19
RFC4P35249 snoU13.30-201ENST00000458951 104 ntBASIC1.38□□□□□ -2.19
RFC4P35249 HMGN2P26-201ENST00000463169 339 ntBASIC1.38□□□□□ -2.19
RFC4P35249 RPS26P55-201ENST00000471178 356 ntBASIC1.38□□□□□ -2.19
RFC4P35249 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.38□□□□□ -2.19
RFC4P35249 MTND1P35-201ENST00000526739 508 ntBASIC1.38□□□□□ -2.19
RFC4P35249 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.38□□□□□ -2.19
RFC4P35249 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.38□□□□□ -2.19
RFC4P35249 MIR1321-201ENST00000637766 79 ntBASIC1.38□□□□□ -2.19
RFC4P35249 ICE2P2-201ENST00000483823 2787 ntBASIC1.37□□□□□ -2.19
RFC4P35249 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
RFC4P35249 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
RFC4P35249 RNY3P3-201ENST00000363816 102 ntBASIC1.37□□□□□ -2.19
RFC4P35249 RNU6-296P-201ENST00000384608 107 ntBASIC1.37□□□□□ -2.19
RFC4P35249 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
RFC4P35249 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
RFC4P35249 MIR1283-1-201ENST00000408494 87 ntBASIC1.37□□□□□ -2.19
RFC4P35249 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.37□□□□□ -2.19
RFC4P35249 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.37□□□□□ -2.19
RFC4P35249 AC060773.1-201ENST00000421698 310 ntBASIC1.37□□□□□ -2.19
RFC4P35249 MTND1P11-201ENST00000456661 876 ntBASIC1.37□□□□□ -2.19
RFC4P35249 RPL23AP75-201ENST00000491601 451 ntBASIC1.37□□□□□ -2.19
RFC4P35249 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.37□□□□□ -2.19
RFC4P35249 AL133215.3-201ENST00000609801 448 ntBASIC1.37□□□□□ -2.19
RFC4P35249 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.37□□□□□ -2.19
RFC4P35249 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.37□□□□□ -2.19
RFC4P35249 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.37□□□□□ -2.19
RFC4P35249 AC024614.3-201ENST00000637860 256 ntBASIC1.37□□□□□ -2.19
RFC4P35249 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
RFC4P35249 MIR373-201ENST00000362273 69 ntBASIC1.36□□□□□ -2.19
RFC4P35249 Y_RNA.205-201ENST00000364128 113 ntBASIC1.36□□□□□ -2.19
RFC4P35249 SNORA25.8-201ENST00000364831 128 ntBASIC1.36□□□□□ -2.19
RFC4P35249 RNU6-784P-201ENST00000384330 106 ntBASIC1.36□□□□□ -2.19
RFC4P35249 RNU6-939P-201ENST00000384634 107 ntBASIC1.36□□□□□ -2.19
RFC4P35249 Y_RNA.554-201ENST00000384672 102 ntBASIC1.36□□□□□ -2.19
RFC4P35249 RNU6-95P-201ENST00000384697 107 ntBASIC1.36□□□□□ -2.19
RFC4P35249 UBE2V1P8-201ENST00000437166 265 ntBASIC1.36□□□□□ -2.19
RFC4P35249 AL135790.2-201ENST00000437701 267 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 138.1 ms