Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.82□□□□□ -1.8
GPC1P35052 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.82□□□□□ -1.8
GPC1P35052 AC006435.5-201ENST00000624486 112 ntBASIC3.82□□□□□ -1.8
GPC1P35052 AC010680.1-201ENST00000590024 3590 ntBASIC3.82□□□□□ -1.8
GPC1P35052 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
GPC1P35052 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.82□□□□□ -1.8
GPC1P35052 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
GPC1P35052 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.81□□□□□ -1.8
GPC1P35052 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.81□□□□□ -1.8
GPC1P35052 Y_RNA.66-201ENST00000362862 102 ntBASIC3.81□□□□□ -1.8
GPC1P35052 RNU6-1138P-201ENST00000365359 106 ntBASIC3.81□□□□□ -1.8
GPC1P35052 SNORA1-201ENST00000384107 130 ntBASIC3.81□□□□□ -1.8
GPC1P35052 MIR562-201ENST00000384894 95 ntBASIC3.81□□□□□ -1.8
GPC1P35052 EDDM3CP-201ENST00000415977 425 ntBASIC3.81□□□□□ -1.8
GPC1P35052 DBIP2-201ENST00000419076 262 ntBASIC3.81□□□□□ -1.8
GPC1P35052 RPL30P4-201ENST00000429309 333 ntBASIC3.81□□□□□ -1.8
GPC1P35052 RNU6-948P-201ENST00000516374 107 ntBASIC3.81□□□□□ -1.8
GPC1P35052 SNORA40.13-201ENST00000516379 120 ntBASIC3.81□□□□□ -1.8
GPC1P35052 SNORA31.9-201ENST00000516429 84 ntBASIC3.81□□□□□ -1.8
GPC1P35052 RN7SL703P-201ENST00000578485 302 ntBASIC3.81□□□□□ -1.8
GPC1P35052 MIR3138-201ENST00000585238 82 ntBASIC3.81□□□□□ -1.8
GPC1P35052 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
GPC1P35052 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC3.81□□□□□ -1.8
GPC1P35052 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
GPC1P35052 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
GPC1P35052 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
GPC1P35052 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
GPC1P35052 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.8□□□□□ -1.8
GPC1P35052 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.8□□□□□ -1.8
GPC1P35052 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
GPC1P35052 SNORA63.5-201ENST00000363548 123 ntBASIC3.8□□□□□ -1.8
GPC1P35052 RNA5SP136-201ENST00000410906 107 ntBASIC3.8□□□□□ -1.8
GPC1P35052 Y_RNA.621-201ENST00000411065 96 ntBASIC3.8□□□□□ -1.8
GPC1P35052 AC008134.1-201ENST00000420943 193 ntBASIC3.8□□□□□ -1.8
GPC1P35052 AC017083.1-201ENST00000428093 483 ntBASIC3.8□□□□□ -1.8
GPC1P35052 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.8□□□□□ -1.8
GPC1P35052 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.8□□□□□ -1.8
GPC1P35052 RPS29P21-201ENST00000496272 170 ntBASIC3.8□□□□□ -1.8
GPC1P35052 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.8□□□□□ -1.8
GPC1P35052 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
GPC1P35052 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
GPC1P35052 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.8□□□□□ -1.8
GPC1P35052 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
GPC1P35052 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.79□□□□□ -1.8
GPC1P35052 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
GPC1P35052 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
GPC1P35052 SNORA70.2-201ENST00000364506 135 ntBASIC3.79□□□□□ -1.8
GPC1P35052 SNORD31B-201ENST00000364977 69 ntBASIC3.79□□□□□ -1.8
GPC1P35052 RNU6-1240P-201ENST00000365155 104 ntBASIC3.79□□□□□ -1.8
GPC1P35052 HMGN2P8-201ENST00000391458 268 ntBASIC3.79□□□□□ -1.8
GPC1P35052 RPL39P34-201ENST00000477141 156 ntBASIC3.79□□□□□ -1.8
GPC1P35052 RNU6-970P-201ENST00000516312 107 ntBASIC3.79□□□□□ -1.8
GPC1P35052 RNU6-504P-201ENST00000516568 104 ntBASIC3.79□□□□□ -1.8
GPC1P35052 RNU7-172P-201ENST00000517125 64 ntBASIC3.79□□□□□ -1.8
GPC1P35052 IGHVIII-67-2-201ENST00000519849 88 ntBASIC3.79□□□□□ -1.8
GPC1P35052 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.79□□□□□ -1.8
GPC1P35052 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.79□□□□□ -1.8
GPC1P35052 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
GPC1P35052 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
GPC1P35052 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.78□□□□□ -1.8
GPC1P35052 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
GPC1P35052 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.78□□□□□ -1.8
GPC1P35052 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.78□□□□□ -1.8
GPC1P35052 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
GPC1P35052 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
GPC1P35052 RNU1-22P-201ENST00000363334 158 ntBASIC3.78□□□□□ -1.8
GPC1P35052 RNU6-944P-201ENST00000364023 107 ntBASIC3.78□□□□□ -1.8
GPC1P35052 Y_RNA.366-201ENST00000365540 102 ntBASIC3.78□□□□□ -1.8
GPC1P35052 RNU6-438P-201ENST00000365561 103 ntBASIC3.78□□□□□ -1.8
GPC1P35052 RNU6-1014P-201ENST00000383940 103 ntBASIC3.78□□□□□ -1.8
GPC1P35052 AC063976.3-201ENST00000426849 329 ntBASIC3.78□□□□□ -1.8
GPC1P35052 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.78□□□□□ -1.8
GPC1P35052 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.78□□□□□ -1.8
GPC1P35052 RNA5SP236-201ENST00000516169 116 ntBASIC3.78□□□□□ -1.8
GPC1P35052 RNU6-1270P-201ENST00000517128 108 ntBASIC3.78□□□□□ -1.8
GPC1P35052 AP003730.1-201ENST00000524605 285 ntBASIC3.78□□□□□ -1.8
GPC1P35052 PARP1P2-201ENST00000556806 195 ntBASIC3.78□□□□□ -1.8
GPC1P35052 AC103810.1-201ENST00000579873 453 ntBASIC3.78□□□□□ -1.8
GPC1P35052 MIR4438-201ENST00000585271 93 ntBASIC3.78□□□□□ -1.8
GPC1P35052 AL137067.1-201ENST00000615933 120 ntBASIC3.78□□□□□ -1.8
GPC1P35052 MIR7151-201ENST00000617477 60 ntBASIC3.78□□□□□ -1.8
GPC1P35052 U6.98-201ENST00000637157 84 ntBASIC3.78□□□□□ -1.8
GPC1P35052 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
GPC1P35052 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
GPC1P35052 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.77□□□□□ -1.81
GPC1P35052 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
GPC1P35052 AL049781.1-201ENST00000623195 3585 ntBASIC3.77□□□□□ -1.81
GPC1P35052 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
GPC1P35052 RNU6-1235P-201ENST00000384559 107 ntBASIC3.77□□□□□ -1.81
GPC1P35052 RNA5SP38-201ENST00000410750 119 ntBASIC3.77□□□□□ -1.81
GPC1P35052 AC016909.1-201ENST00000415916 166 ntBASIC3.77□□□□□ -1.81
GPC1P35052 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.77□□□□□ -1.81
GPC1P35052 RNU6-498P-201ENST00000459468 107 ntBASIC3.77□□□□□ -1.81
GPC1P35052 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.77□□□□□ -1.81
GPC1P35052 AC026726.1-201ENST00000512859 601 ntBASIC3.77□□□□□ -1.81
GPC1P35052 AC097462.1-201ENST00000514125 324 ntBASIC3.77□□□□□ -1.81
GPC1P35052 RNA5SP281-201ENST00000516504 135 ntBASIC3.77□□□□□ -1.81
GPC1P35052 MRPL49P2-201ENST00000521066 465 ntBASIC3.77□□□□□ -1.81
GPC1P35052 CYCSP29-201ENST00000533731 318 ntBASIC3.77□□□□□ -1.81
GPC1P35052 RN7SL600P-201ENST00000581811 299 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 225.1 ms