Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 RNU1-76P-201ENST00000362903 159 ntBASIC2.53□□□□□ -2
CIITAP33076 RNU6-873P-201ENST00000363833 107 ntBASIC2.53□□□□□ -2
CIITAP33076 Y_RNA.276-201ENST00000364732 109 ntBASIC2.53□□□□□ -2
CIITAP33076 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.53□□□□□ -2
CIITAP33076 RNU6-1145P-201ENST00000384246 107 ntBASIC2.53□□□□□ -2
CIITAP33076 RNU6-541P-201ENST00000384709 110 ntBASIC2.53□□□□□ -2
CIITAP33076 MIR524-201ENST00000385242 87 ntBASIC2.53□□□□□ -2
CIITAP33076 MIR208B-201ENST00000401172 77 ntBASIC2.53□□□□□ -2
CIITAP33076 RNU6-121P-201ENST00000410525 99 ntBASIC2.53□□□□□ -2
CIITAP33076 RN7SKP223-201ENST00000410582 62 ntBASIC2.53□□□□□ -2
CIITAP33076 RNU6-1001P-201ENST00000411265 100 ntBASIC2.53□□□□□ -2
CIITAP33076 AC004866.1-201ENST00000411748 78 ntBASIC2.53□□□□□ -2
CIITAP33076 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.53□□□□□ -2
CIITAP33076 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.53□□□□□ -2
CIITAP33076 AC145146.1-201ENST00000496370 254 ntBASIC2.53□□□□□ -2
CIITAP33076 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.53□□□□□ -2
CIITAP33076 RNU6-237P-201ENST00000515985 71 ntBASIC2.53□□□□□ -2
CIITAP33076 RNA5SP200-201ENST00000516360 103 ntBASIC2.53□□□□□ -2
CIITAP33076 MIR1273D-201ENST00000577266 86 ntBASIC2.53□□□□□ -2
CIITAP33076 MIR5695-201ENST00000579717 85 ntBASIC2.53□□□□□ -2
CIITAP33076 MIR4658-201ENST00000584344 65 ntBASIC2.53□□□□□ -2
CIITAP33076 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.53□□□□□ -2
CIITAP33076 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.53□□□□□ -2
CIITAP33076 RPL30P11-203ENST00000598995 310 ntBASIC2.53□□□□□ -2
CIITAP33076 RPS29P30-201ENST00000600975 111 ntBASIC2.53□□□□□ -2
CIITAP33076 AL138963.2-201ENST00000605137 226 ntBASIC2.53□□□□□ -2
CIITAP33076 AC010205.1-201ENST00000616668 449 ntBASIC2.53□□□□□ -2
CIITAP33076 BX322639.1-202ENST00000423987 2213 ntBASIC2.53□□□□□ -2
CIITAP33076 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2.01
CIITAP33076 RNU6-611P-201ENST00000384276 104 ntBASIC2.52□□□□□ -2.01
CIITAP33076 Y_RNA.471-201ENST00000384312 102 ntBASIC2.52□□□□□ -2.01
CIITAP33076 Y_RNA.526-201ENST00000384572 110 ntBASIC2.52□□□□□ -2.01
CIITAP33076 SNORA46.1-201ENST00000391069 153 ntBASIC2.52□□□□□ -2.01
CIITAP33076 MIR1261-201ENST00000408659 82 ntBASIC2.52□□□□□ -2.01
CIITAP33076 RNA5SP425-201ENST00000410336 112 ntBASIC2.52□□□□□ -2.01
CIITAP33076 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.52□□□□□ -2.01
CIITAP33076 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.52□□□□□ -2.01
CIITAP33076 AL121890.1-201ENST00000435457 205 ntBASIC2.52□□□□□ -2.01
CIITAP33076 RNA5SP54-201ENST00000516951 92 ntBASIC2.52□□□□□ -2.01
CIITAP33076 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.52□□□□□ -2.01
CIITAP33076 MYL12BP1-201ENST00000569826 507 ntBASIC2.52□□□□□ -2.01
CIITAP33076 AL713866.2-201ENST00000603579 219 ntBASIC2.52□□□□□ -2.01
CIITAP33076 AL121655.1-201ENST00000605811 308 ntBASIC2.52□□□□□ -2.01
CIITAP33076 AL357075.2-201ENST00000614906 189 ntBASIC2.52□□□□□ -2.01
CIITAP33076 AC240442.1-201ENST00000616055 283 ntBASIC2.52□□□□□ -2.01
CIITAP33076 AC005296.1-201ENST00000616145 209 ntBASIC2.52□□□□□ -2.01
CIITAP33076 MIR203B-201ENST00000636080 86 ntBASIC2.52□□□□□ -2.01
CIITAP33076 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.52□□□□□ -2.01
CIITAP33076 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.52□□□□□ -2.01
CIITAP33076 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CIITAP33076 ZNF204P-201ENST00000416749 2397 ntBASIC2.51□□□□□ -2.01
CIITAP33076 RNU6-238P-201ENST00000363313 106 ntBASIC2.51□□□□□ -2.01
CIITAP33076 Y_RNA.149-201ENST00000363558 117 ntBASIC2.51□□□□□ -2.01
CIITAP33076 Y_RNA.176-201ENST00000363815 109 ntBASIC2.51□□□□□ -2.01
CIITAP33076 Y_RNA.193-201ENST00000363979 102 ntBASIC2.51□□□□□ -2.01
CIITAP33076 RNU6-879P-201ENST00000364328 108 ntBASIC2.51□□□□□ -2.01
CIITAP33076 RNA5SP125-201ENST00000364843 120 ntBASIC2.51□□□□□ -2.01
CIITAP33076 RNU1-52P-201ENST00000384190 164 ntBASIC2.51□□□□□ -2.01
CIITAP33076 RNU6-196P-201ENST00000384315 107 ntBASIC2.51□□□□□ -2.01
CIITAP33076 SNORA12-201ENST00000391162 147 ntBASIC2.51□□□□□ -2.01
CIITAP33076 RN7SKP192-201ENST00000411291 327 ntBASIC2.51□□□□□ -2.01
CIITAP33076 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.51□□□□□ -2.01
CIITAP33076 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.51□□□□□ -2.01
CIITAP33076 SDAD1P3-201ENST00000427380 333 ntBASIC2.51□□□□□ -2.01
CIITAP33076 AL161788.1-201ENST00000441805 169 ntBASIC2.51□□□□□ -2.01
CIITAP33076 DYNLT3P2-201ENST00000442517 295 ntBASIC2.51□□□□□ -2.01
CIITAP33076 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.51□□□□□ -2.01
CIITAP33076 AL139109.1-201ENST00000455491 297 ntBASIC2.51□□□□□ -2.01
CIITAP33076 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.51□□□□□ -2.01
CIITAP33076 RPL26P26-201ENST00000480251 434 ntBASIC2.51□□□□□ -2.01
CIITAP33076 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.51□□□□□ -2.01
CIITAP33076 YWHAEP4-201ENST00000505390 198 ntBASIC2.51□□□□□ -2.01
CIITAP33076 RN7SKP49-201ENST00000516675 260 ntBASIC2.51□□□□□ -2.01
CIITAP33076 RNU6-1198P-201ENST00000516904 67 ntBASIC2.51□□□□□ -2.01
CIITAP33076 AC093023.1-201ENST00000547375 507 ntBASIC2.51□□□□□ -2.01
CIITAP33076 EIF4A1P12-201ENST00000551910 141 ntBASIC2.51□□□□□ -2.01
CIITAP33076 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.51□□□□□ -2.01
CIITAP33076 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.51□□□□□ -2.01
CIITAP33076 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.51□□□□□ -2.01
CIITAP33076 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.51□□□□□ -2.01
CIITAP33076 AC011476.5-201ENST00000615594 130 ntBASIC2.51□□□□□ -2.01
CIITAP33076 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
CIITAP33076 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
CIITAP33076 Y_RNA.64-201ENST00000362845 102 ntBASIC2.5□□□□□ -2.01
CIITAP33076 RNU6-770P-201ENST00000363929 105 ntBASIC2.5□□□□□ -2.01
CIITAP33076 SNORD32B-201ENST00000364460 84 ntBASIC2.5□□□□□ -2.01
CIITAP33076 RNU4-56P-201ENST00000364700 142 ntBASIC2.5□□□□□ -2.01
CIITAP33076 RNU6-472P-201ENST00000384299 107 ntBASIC2.5□□□□□ -2.01
CIITAP33076 SNORA48.3-201ENST00000391081 134 ntBASIC2.5□□□□□ -2.01
CIITAP33076 AC010095.1-201ENST00000443543 144 ntBASIC2.5□□□□□ -2.01
CIITAP33076 TRBV12-1-201ENST00000479785 344 ntBASIC2.5□□□□□ -2.01
CIITAP33076 SNORA31.11-201ENST00000516528 139 ntBASIC2.5□□□□□ -2.01
CIITAP33076 AC091144.1-201ENST00000519573 138 ntBASIC2.5□□□□□ -2.01
CIITAP33076 AL161670.1-201ENST00000554348 137 ntBASIC2.5□□□□□ -2.01
CIITAP33076 AC136932.1-201ENST00000574771 208 ntBASIC2.5□□□□□ -2.01
CIITAP33076 MIR4659A-201ENST00000580269 81 ntBASIC2.5□□□□□ -2.01
CIITAP33076 AL355297.2-201ENST00000604792 129 ntBASIC2.5□□□□□ -2.01
CIITAP33076 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CIITAP33076 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
CIITAP33076 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms