Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 AC011494.1-201ENST00000596454 237 ntBASIC2.01□□□□□ -2.09
CAPN3P20807 AC084782.3-201ENST00000612282 578 ntBASIC2.01□□□□□ -2.09
CAPN3P20807 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.01□□□□□ -2.09
CAPN3P20807 MIR6132-201ENST00000622083 109 ntBASIC2.01□□□□□ -2.09
CAPN3P20807 AC099654.5-201ENST00000636479 350 ntBASIC2.01□□□□□ -2.09
CAPN3P20807 MTND4P1-201ENST00000457501 1466 ntBASIC2.01□□□□□ -2.09
CAPN3P20807 MTND5P6-201ENST00000422338 1798 ntBASIC2□□□□□ -2.09
CAPN3P20807 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
CAPN3P20807 MTND4P12-201ENST00000498999 1377 ntBASIC2□□□□□ -2.09
CAPN3P20807 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
CAPN3P20807 RNU6-1266P-201ENST00000362794 105 ntBASIC2□□□□□ -2.09
CAPN3P20807 snoU2-30.2-201ENST00000362805 70 ntBASIC2□□□□□ -2.09
CAPN3P20807 U3.8-201ENST00000363675 217 ntBASIC2□□□□□ -2.09
CAPN3P20807 Y_RNA.179-201ENST00000363844 90 ntBASIC2□□□□□ -2.09
CAPN3P20807 Y_RNA.248-201ENST00000364501 109 ntBASIC2□□□□□ -2.09
CAPN3P20807 Y_RNA.405-201ENST00000383979 100 ntBASIC2□□□□□ -2.09
CAPN3P20807 Y_RNA.451-201ENST00000384200 100 ntBASIC2□□□□□ -2.09
CAPN3P20807 Y_RNA.524-201ENST00000384564 100 ntBASIC2□□□□□ -2.09
CAPN3P20807 SNORA64-201ENST00000384674 134 ntBASIC2□□□□□ -2.09
CAPN3P20807 Y_RNA.561-201ENST00000384694 100 ntBASIC2□□□□□ -2.09
CAPN3P20807 AC010409.1-201ENST00000487382 476 ntBASIC2□□□□□ -2.09
CAPN3P20807 HMGB3P17-201ENST00000504195 649 ntBASIC2□□□□□ -2.09
CAPN3P20807 RNU1-40P-201ENST00000516816 164 ntBASIC2□□□□□ -2.09
CAPN3P20807 RNU1-97P-201ENST00000516872 164 ntBASIC2□□□□□ -2.09
CAPN3P20807 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC2□□□□□ -2.09
CAPN3P20807 MIR8074-201ENST00000615081 81 ntBASIC2□□□□□ -2.09
CAPN3P20807 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
CAPN3P20807 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
CAPN3P20807 Y_RNA.160-201ENST00000363677 92 ntBASIC1.99□□□□□ -2.09
CAPN3P20807 RNU6-1059P-201ENST00000363752 98 ntBASIC1.99□□□□□ -2.09
CAPN3P20807 RNU2-40P-201ENST00000410833 196 ntBASIC1.99□□□□□ -2.09
CAPN3P20807 MTCYBP10-201ENST00000424905 650 ntBASIC1.99□□□□□ -2.09
CAPN3P20807 USP9YP16-201ENST00000430287 407 ntBASIC1.99□□□□□ -2.09
CAPN3P20807 HMGN2P34-201ENST00000437647 269 ntBASIC1.99□□□□□ -2.09
CAPN3P20807 USP9YP23-201ENST00000455085 407 ntBASIC1.99□□□□□ -2.09
CAPN3P20807 AC026782.1-201ENST00000512952 449 ntBASIC1.99□□□□□ -2.09
CAPN3P20807 RNU6-1114P-201ENST00000516022 107 ntBASIC1.99□□□□□ -2.09
CAPN3P20807 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.99□□□□□ -2.09
CAPN3P20807 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.99□□□□□ -2.09
CAPN3P20807 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.99□□□□□ -2.09
CAPN3P20807 AC006001.4-201ENST00000622243 395 ntBASIC1.99□□□□□ -2.09
CAPN3P20807 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
CAPN3P20807 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
CAPN3P20807 Y_RNA.269-201ENST00000364685 89 ntBASIC1.98□□□□□ -2.09
CAPN3P20807 RNU6-842P-201ENST00000384269 107 ntBASIC1.98□□□□□ -2.09
CAPN3P20807 SNORA67.2-201ENST00000384300 149 ntBASIC1.98□□□□□ -2.09
CAPN3P20807 MIR934-201ENST00000401241 83 ntBASIC1.98□□□□□ -2.09
CAPN3P20807 Y_RNA.594-201ENST00000410373 140 ntBASIC1.98□□□□□ -2.09
CAPN3P20807 RNU6-1050P-201ENST00000410388 107 ntBASIC1.98□□□□□ -2.09
CAPN3P20807 Y_RNA.599-201ENST00000410489 109 ntBASIC1.98□□□□□ -2.09
CAPN3P20807 MTND1P2-201ENST00000430604 821 ntBASIC1.98□□□□□ -2.09
CAPN3P20807 AC099677.2-201ENST00000436385 175 ntBASIC1.98□□□□□ -2.09
CAPN3P20807 UBE2V1P7-201ENST00000446395 340 ntBASIC1.98□□□□□ -2.09
CAPN3P20807 RNU6-221P-201ENST00000459541 99 ntBASIC1.98□□□□□ -2.09
CAPN3P20807 AP000870.1-201ENST00000472927 406 ntBASIC1.98□□□□□ -2.09
CAPN3P20807 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.98□□□□□ -2.09
CAPN3P20807 AC093303.1-201ENST00000514549 295 ntBASIC1.98□□□□□ -2.09
CAPN3P20807 CYCSP23-201ENST00000519781 313 ntBASIC1.98□□□□□ -2.09
CAPN3P20807 HSBP1P1-201ENST00000555205 166 ntBASIC1.98□□□□□ -2.09
CAPN3P20807 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.98□□□□□ -2.09
CAPN3P20807 AC010999.1-201ENST00000611856 324 ntBASIC1.98□□□□□ -2.09
CAPN3P20807 AC126177.8-201ENST00000618339 1015 ntBASIC1.98□□□□□ -2.09
CAPN3P20807 MIR338-201ENST00000636369 67 ntBASIC1.98□□□□□ -2.09
CAPN3P20807 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
CAPN3P20807 ZNF355P-201ENST00000427301 3216 ntBASIC1.97□□□□□ -2.09
CAPN3P20807 Y_RNA.166-201ENST00000363730 102 ntBASIC1.97□□□□□ -2.09
CAPN3P20807 RNU6-1240P-201ENST00000365155 104 ntBASIC1.97□□□□□ -2.09
CAPN3P20807 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
CAPN3P20807 U8.13-201ENST00000390842 128 ntBASIC1.97□□□□□ -2.09
CAPN3P20807 RNU6-360P-201ENST00000390944 104 ntBASIC1.97□□□□□ -2.09
CAPN3P20807 RNU6-876P-201ENST00000391295 104 ntBASIC1.97□□□□□ -2.09
CAPN3P20807 RNU1-139P-201ENST00000391307 165 ntBASIC1.97□□□□□ -2.09
CAPN3P20807 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.97□□□□□ -2.09
CAPN3P20807 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.97□□□□□ -2.09
CAPN3P20807 RNU7-30P-201ENST00000516835 62 ntBASIC1.97□□□□□ -2.09
CAPN3P20807 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.97□□□□□ -2.09
CAPN3P20807 AC024995.1-201ENST00000523014 93 ntBASIC1.97□□□□□ -2.09
CAPN3P20807 CBX3P8-201ENST00000532412 525 ntBASIC1.97□□□□□ -2.09
CAPN3P20807 MIR5695-201ENST00000579717 85 ntBASIC1.97□□□□□ -2.09
CAPN3P20807 MIR4781-201ENST00000585250 76 ntBASIC1.97□□□□□ -2.09
CAPN3P20807 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.97□□□□□ -2.09
CAPN3P20807 AC098657.3-201ENST00000620434 263 ntBASIC1.97□□□□□ -2.09
CAPN3P20807 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.97□□□□□ -2.09
CAPN3P20807 AL133216.2-202ENST00000634512 349 ntBASIC1.97□□□□□ -2.09
CAPN3P20807 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
CAPN3P20807 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.97□□□□□ -2.09
CAPN3P20807 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
CAPN3P20807 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.96□□□□□ -2.1
CAPN3P20807 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CAPN3P20807 RNU6-296P-201ENST00000384608 107 ntBASIC1.96□□□□□ -2.1
CAPN3P20807 FGF7P8-201ENST00000402994 292 ntBASIC1.96□□□□□ -2.1
CAPN3P20807 AC019129.1-201ENST00000403786 261 ntBASIC1.96□□□□□ -2.1
CAPN3P20807 AL117342.1-201ENST00000404861 406 ntBASIC1.96□□□□□ -2.1
CAPN3P20807 AL139156.1-201ENST00000412785 841 ntBASIC1.96□□□□□ -2.1
CAPN3P20807 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.96□□□□□ -2.1
CAPN3P20807 MTND3P23-201ENST00000431980 347 ntBASIC1.96□□□□□ -2.1
CAPN3P20807 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.96□□□□□ -2.1
CAPN3P20807 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.96□□□□□ -2.1
CAPN3P20807 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.96□□□□□ -2.1
CAPN3P20807 AC084364.2-201ENST00000546924 395 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 146.5 ms